List of works - Ben Pascoe

A 500-year tale of co-evolution, adaptation, and virulence: Helicobacter pylori in the Americas

scientific article published on 02 September 2020

A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

scientific article published on 02 August 2018

A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter.

scientific article

Agricultural intensification and the evolution of host specialism in the enteric pathogen Campylobacter jejuni

scientific article published on 04 May 2020

Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli

correction of a scholarly article

Bayesian identification of bacterial strains from sequencing data

scientific article

Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

scientific article

Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations

scientific article

Comparative Genomics Study of Staphylococcus epidermidis Isolates from Orthopedic-Device-Related Infections Correlated with Patient Outcome.

scientific article

Comparative genomic survey of Bacillus cereus sensu stricto isolates from the dairy production chain in Brazil.

scientific article published on 27 December 2017

Convergent amino acid signatures in polyphyletic Campylobacter jejuni sub-populations suggest human niche tropism

scientific article published on 14 February 2018

Core genome sequence analysis to characterize Salmonella enterica serovar Rissen ST469 from a swine production chain

scientific article published on 28 May 2019

Correction: Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples

scientific article

Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

scientific article published in Nature Communications

Domestication of Campylobacter jejuni NCTC 11168

scientific article published on 16 July 2019

Dormant cells of Staphylococcus aureus are resuscitated by spent culture supernatant

scientific article

Draft Genome Sequence of an Enterobacter Species Associated with Illnesses and Powdered Infant Formula

scientific article published on 14 January 2016

Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis.

scientific article published on 16 April 2015

Enhanced biofilm formation and multi-host transmission evolve from divergent genetic backgrounds in Campylobacter jejuni.

scientific article published on 16 September 2015

Epistasis analysis uncovers hidden antibiotic resistance-associated fitness costs hampering the evolution of MRSA ⬇️

scientific article published on 18 July 2018

Evidence of land-sea transfer of the zoonotic pathogen Campylobacter to a wildlife marine sentinel species.

scientific article published on 31 December 2014

From Escherich to the Escherichia coli genome

scientific article published on June 2016

Gene pool transmission of multidrug resistance among Campylobacter from livestock, sewage and human disease

scientific article published on 27 August 2019

Genetic Diversity of Composite Enterotoxigenic Staphylococcus epidermidis Pathogenicity Islands

scientific article published on 01 December 2019

Genetic and chemical differentiation of Campylobacter coli and Campylobacter jejuni lipooligosaccharide pathways

Genetic features of livestock-associated Staphylococcus aureus ST9 isolates from Chinese pigs that carry the lsa(E) gene for quinupristin/dalfopristin resistance

scientific article published on 10 August 2016

Genome Comparison of Erythromycin Resistant Campylobacter from Turkeys Identifies Hosts and Pathways for Horizontal Spread of erm(B) Genes.

scientific article published on 15 November 2017

Genome evolution and the emergence of pathogenicity in avian Escherichia coli

scientific article published in 2021

Genome-Wide Identification of Host-Segregating Epidemiological Markers for Source Attribution in Campylobacter jejuni

scientific article published on 23 January 2017

Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

scientific article

Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

article published in 2016

Genome-wide identification of host-segregating SNPs for source attribution of clinical Campylobacter coli isolates

scientific article published on 09 October 2020

Genomic epidemiology of Campylobacter jejuni associated with asymptomatic pediatric infection in the Peruvian Amazon

scientific article published on 10 August 2020

Genomic epidemiology of clinical Campylobacter spp. at a single health trust site

article

Genomic epidemiology of the commercially important pathogen Renibacterium salmoninarum within the Chilean salmon industry

article

Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins

scientific article published on 16 February 2017

Hidden antibiotic resistance fitness costs revealed by GWAS-based epistasis analysis

scholarly article published 11 June 2017

High-resolution sweep metagenomics using ultrafast read mapping and inference

Large Sequence Diversity within the Biosynthesis Locus and Common Biochemical Features of Campylobacter coli Lipooligosaccharides

scientific article published on August 2016

Lineage-specific plasmid acquisition and the evolution of specialized pathogens in Bacillus thuringiensis and the Bacillus cereus group.

scientific article published on 6 March 2018

Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.

scientific article published on 10 May 2017

Local genes for local bacteria: evidence of allopatry in the genomes of transatlantic Campylobacter populations

article

Molecular epidemiology and comparative genomics of Campylobacter concisus strains from saliva, faeces and gut mucosal biopsies in inflammatory bowel disease

scientific article

Persistent Staphylococcus aureus isolates from two independent cases of bacteremia display increased bacterial fitness and novel immune evasion phenotypes

scientific article published on 8 June 2015

Prevalence of faecal carriage of extended-spectrum β-lactamase (ESBL)-producing in veterinary hospital staff and students

scholarly article by Alexandra Royden et al published 2019 in Veterinary record open

Progressive genome-wide introgression in agricultural Campylobacter coli

scientific article published on 20 December 2012

Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages

scientific article published in 2021

Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections

scientific article

Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus

scientific article

Staphylococcus epidermidis in Biomaterial-Associated Infections

The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species.

scientific article published on 29 March 2018

The emergence of plasmid-borne cfr-mediated linezolid resistant-staphylococci in Vietnam

scientific article published on 26 April 2020

The zinc-responsive regulator Zur controls expression of the coelibactin gene cluster in Streptomyces coelicolor

scientific article

Zinc-responsive regulation of alternative ribosomal protein genes in Streptomyces coelicolor involves zur and sigmaR.

scientific article

List of works by Ben Pascoe

A 500-year tale of co-evolution, adaptation, and virulence: Helicobacter pylori in the Americas

A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter.

Agricultural intensification and the evolution of host specialism in the enteric pathogen Campylobacter jejuni

Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli

Bayesian identification of bacterial strains from sequencing data

Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations

Comparative Genomics Study of Staphylococcus epidermidis Isolates from Orthopedic-Device-Related Infections Correlated with Patient Outcome.

Comparative genomic survey of Bacillus cereus sensu stricto isolates from the dairy production chain in Brazil.

Convergent amino acid signatures in polyphyletic Campylobacter jejuni sub-populations suggest human niche tropism

Core genome sequence analysis to characterize Salmonella enterica serovar Rissen ST469 from a swine production chain

Correction: Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples

Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

Domestication of Campylobacter jejuni NCTC 11168

Dormant cells of Staphylococcus aureus are resuscitated by spent culture supernatant

Draft Genome Sequence of an Enterobacter Species Associated with Illnesses and Powdered Infant Formula

Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis.

Enhanced biofilm formation and multi-host transmission evolve from divergent genetic backgrounds in Campylobacter jejuni.

Epistasis analysis uncovers hidden antibiotic resistance-associated fitness costs hampering the evolution of MRSA ⬇️

Evidence of land-sea transfer of the zoonotic pathogen Campylobacter to a wildlife marine sentinel species.

From Escherich to the Escherichia coli genome

Gene pool transmission of multidrug resistance among Campylobacter from livestock, sewage and human disease

Genetic Diversity of Composite Enterotoxigenic Staphylococcus epidermidis Pathogenicity Islands

Genetic and chemical differentiation of Campylobacter coli and Campylobacter jejuni lipooligosaccharide pathways

Genetic features of livestock-associated Staphylococcus aureus ST9 isolates from Chinese pigs that carry the lsa(E) gene for quinupristin/dalfopristin resistance

Genome Comparison of Erythromycin Resistant Campylobacter from Turkeys Identifies Hosts and Pathways for Horizontal Spread of erm(B) Genes.

Genome evolution and the emergence of pathogenicity in avian Escherichia coli

Genome-Wide Identification of Host-Segregating Epidemiological Markers for Source Attribution in Campylobacter jejuni

Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

Genome-wide identification of host-segregating SNPs for source attribution of clinical Campylobacter coli isolates

Genomic epidemiology of Campylobacter jejuni associated with asymptomatic pediatric infection in the Peruvian Amazon

Genomic epidemiology of clinical Campylobacter spp. at a single health trust site

Genomic epidemiology of the commercially important pathogen Renibacterium salmoninarum within the Chilean salmon industry

Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins

Hidden antibiotic resistance fitness costs revealed by GWAS-based epistasis analysis

High-resolution sweep metagenomics using ultrafast read mapping and inference

Large Sequence Diversity within the Biosynthesis Locus and Common Biochemical Features of Campylobacter coli Lipooligosaccharides

Lineage-specific plasmid acquisition and the evolution of specialized pathogens in Bacillus thuringiensis and the Bacillus cereus group.

Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.

Local genes for local bacteria: evidence of allopatry in the genomes of transatlantic Campylobacter populations

Local genes for local bacteria: evidence of allopatry in the genomes of transatlantic Campylobacter populations

Local genes for local bacteria: evidence of allopatry in the genomes of transatlantic Campylobacter populations

Molecular epidemiology and comparative genomics of Campylobacter concisus strains from saliva, faeces and gut mucosal biopsies in inflammatory bowel disease

Persistent Staphylococcus aureus isolates from two independent cases of bacteremia display increased bacterial fitness and novel immune evasion phenotypes

Prevalence of faecal carriage of extended-spectrum β-lactamase (ESBL)-producing in veterinary hospital staff and students

Progressive genome-wide introgression in agricultural Campylobacter coli

Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages

Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections

Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus

Staphylococcus epidermidis in Biomaterial-Associated Infections

The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species.

The emergence of plasmid-borne cfr-mediated linezolid resistant-staphylococci in Vietnam

The zinc-responsive regulator Zur controls expression of the coelibactin gene cluster in Streptomyces coelicolor

Zinc-responsive regulation of alternative ribosomal protein genes in Streptomyces coelicolor involves zur and sigmaR.