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List of works by Ben Pascoe

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Progressive genome-wide introgression in agricultural Campylobacter coli

scientific article published on 20 December 2012
Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations

scientific article
A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter.

scientific article
Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis.

scientific article published on 16 April 2015
Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections

scientific article
Zinc-responsive regulation of alternative ribosomal protein genes in Streptomyces coelicolor involves zur and sigmaR.

scientific article
Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

scientific article
Enhanced biofilm formation and multi-host transmission evolve from divergent genetic backgrounds in Campylobacter jejuni.

scientific article published on 16 September 2015
The zinc-responsive regulator Zur controls expression of the coelibactin gene cluster in Streptomyces coelicolor

scientific article
Genome-Wide Identification of Host-Segregating Epidemiological Markers for Source Attribution in Campylobacter jejuni

scientific article published on 23 January 2017
Comparative Genomics Study of Staphylococcus epidermidis Isolates from Orthopedic-Device-Related Infections Correlated with Patient Outcome.

scientific article
Persistent Staphylococcus aureus isolates from two independent cases of bacteremia display increased bacterial fitness and novel immune evasion phenotypes

scientific article published on 8 June 2015
Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

scientific article
Dormant cells of Staphylococcus aureus are resuscitated by spent culture supernatant

scientific article
Genome Comparison of Erythromycin Resistant Campylobacter from Turkeys Identifies Hosts and Pathways for Horizontal Spread of erm(B) Genes.

scientific article published on 15 November 2017
Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus

scientific article
Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.

scientific article published on 10 May 2017
Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins

scientific article published on 16 February 2017
Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

scientific article published in Nature Communications
Staphylococcus epidermidis in Biomaterial-Associated Infections

From Escherich to the Escherichia coli genome

scientific article published on June 2016
Evidence of land-sea transfer of the zoonotic pathogen Campylobacter to a wildlife marine sentinel species.

scientific article published on 31 December 2014
Molecular epidemiology and comparative genomics of Campylobacter concisus strains from saliva, faeces and gut mucosal biopsies in inflammatory bowel disease

scientific article
Lineage-specific plasmid acquisition and the evolution of specialized pathogens in Bacillus thuringiensis and the Bacillus cereus group.

scientific article published on 6 March 2018
Epistasis analysis uncovers hidden antibiotic resistance-associated fitness costs hampering the evolution of MRSA

scientific article published on 18 July 2018
Gene pool transmission of multidrug resistance among Campylobacter from livestock, sewage and human disease

scientific article published on 27 August 2019
Genetic features of livestock-associated Staphylococcus aureus ST9 isolates from Chinese pigs that carry the lsa(E) gene for quinupristin/dalfopristin resistance

scientific article published on 10 August 2016
Bayesian identification of bacterial strains from sequencing data

scientific article
Prevalence of faecal carriage of extended-spectrum β-lactamase (ESBL)-producing in veterinary hospital staff and students

scholarly article by Alexandra Royden et al published 2019 in Veterinary record open
A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

scientific article published on 02 August 2018
The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species.

scientific article published on 29 March 2018
Genomic epidemiology of clinical Campylobacter spp. at a single health trust site

article
Convergent amino acid signatures in polyphyletic Campylobacter jejuni sub-populations suggest human niche tropism

scientific article published on 14 February 2018
Genomic epidemiology of the commercially important pathogen Renibacterium salmoninarum within the Chilean salmon industry

article
Large Sequence Diversity within the Biosynthesis Locus and Common Biochemical Features of Campylobacter coli Lipooligosaccharides

scientific article published on August 2016
Comparative genomic survey of Bacillus cereus sensu stricto isolates from the dairy production chain in Brazil.

scientific article published on 27 December 2017
A 500-year tale of co-evolution, adaptation, and virulence: Helicobacter pylori in the Americas

scientific article published on 02 September 2020
Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

Agricultural intensification and the evolution of host specialism in the enteric pathogen Campylobacter jejuni

scientific article published on 04 May 2020
Domestication of Campylobacter jejuni NCTC 11168

scientific article published on 16 July 2019
Correction: Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples

scientific article
Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

article published in 2016
Local genes for local bacteria: evidence of allopatry in the genomes of transatlantic Campylobacter populations

article
Genome evolution and the emergence of pathogenicity in avian Escherichia coli

scientific article published in 2021
Draft Genome Sequence of an Enterobacter Species Associated with Illnesses and Powdered Infant Formula

scientific article published on 14 January 2016
Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli

correction of a scholarly article
Genome-wide identification of host-segregating SNPs for source attribution of clinical Campylobacter coli isolates

scientific article published on 09 October 2020
Genetic Diversity of Composite Enterotoxigenic Staphylococcus epidermidis Pathogenicity Islands

scientific article published on 01 December 2019
Stereoselective metabolism of chloramphenicol by bacteria isolated from wastewater, and the importance of stereochemistry in environmental risk assessments for antibiotics

scientific article published in June 2022
High-resolution sweep metagenomics using ultrafast read mapping and inference

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