Search filters

Authors whose works are in public domain in at least one jurisdiction

List of works by Torgeir R Hvidsten

A comprehensive analysis of the structure-function relationship in proteins based on local structure similarity.

scientific article

A metabolite roadmap of the wood-forming tissue in Populus tremula

scientific article published on 10 July 2020

A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of Populus trees.

scientific article published on 3 January 2018

A novel approach to fold recognition using sequence-derived properties from sets of structurally similar local fragments of proteins

scientific article

A segmental maximum a posteriori approach to genome-wide copy number profiling.

scientific article published on 19 January 2008

A systems biology model of the regulatory network in Populusleaves reveals interacting regulators and conserved regulation ⬇️

scientific article published on January 13, 2011

Activity-dormancy transition in the cambial meristem involves stage-specific modulation of auxin response in hybrid aspen

scientific article

AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula.

scientific article

Challenges in microarray class discovery: a comprehensive examination of normalization, gene selection and clustering ⬇️

scientific article

Characterization of cytokinin signaling and homeostasis gene families in two hardwood tree species: Populus trichocarpa and Prunus persica.

scientific article

Classification of microarrays; synergistic effects between normalization, gene selection and machine learning

scientific article

Co-expression analysis, proteomic and metabolomic study on the impact of a Deg/HtrA protease triple mutant in Synechocystis sp. PCC 6803 exposed to temperature and high light stress

scientific article

ComPlEx: conservation and divergence of co-expression networks in A. thaliana, Populus and O. sativa

scientific article published on 6 February 2014

Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication

scientific article published on 13 April 2021

Differential gene expression in the olfactory bulb following exposure to the olfactory toxicant 2,6-dichlorophenyl methylsulphone and its 2,5-dichlorinated isomer in mice

scientific article published on 2 June 2007

Discovering regulatory binding-site modules using rule-based learning.

scientific article

Ethylene signaling induces gelatinous layers with typical features of tension wood in hybrid aspen

scientific article published on 12 March 2018

Evolution of Cold Acclimation and Its Role in Niche Transition in the Temperate Grass Subfamily Pooideae

scientific article published on 08 March 2019

Extracting functional trends from whole genome duplication events using comparative genomics

scientific article

From proteins to polysaccharides: lifestyle and genetic evolution of Coprothermobacter proteolyticus

scientific article published on 12 October 2018

Gene co-expression network connectivity is an important determinant of selective constraint

scientific article

Gene expression trends and protein features effectively complement each other in gene function prediction

scientific article published on 02 December 2008

Generalized modeling of enzyme-ligand interactions using proteochemometrics and local protein substructures

scientific article published in November 2006

Genome interplay in the grain transcriptome of hexaploid bread wheat

scientific article published in July 2014

Integration of absolute multi-omics reveals dynamic protein-to-RNA ratios and metabolic interplay within mixed-domain microbiomes

scientific article published on 18 September 2020

Interaction model based on local protein substructures generalizes to the entire structural enzyme-ligand space.

scientific article

Leaf shape in Populus tremula is a complex, omnigenic trait

scientific article published on 13 October 2020

Learning rule-based models of biological process from gene expression time profiles using gene ontology.

scientific article published on June 2003

Life-stage associated remodeling of lipid metabolism regulation in Atlantic salmon.

scientific article published on 12 February 2018

Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification

scientific article

Local descriptors of protein structure: a systematic analysis of the sequence-structure relationship in proteins using short- and long-range interactions

scientific article

Markers of adenocarcinoma characteristic of the site of origin: development of a diagnostic algorithm.

scientific article published in May 2005

Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut

scientific article published on 13 November 2020

NorWood: a gene expression resource for evo-devo studies of conifer wood development

scientific article

OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants

scientific article (publication date: 17 December 2013)

Photoperiodic control of seasonal growth is mediated by ABA acting on cell-cell communication.

scientific article published on 8 March 2018

Populus tremula (European aspen) shows no evidence of sexual dimorphism.

scientific article

Predicting gene ontology biological process from temporal gene expression patterns.

scientific article published on 14 April 2003

Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development

scientific article

Revealing cell cycle control by combining model-based detection of periodic expression with novel cis-regulatory descriptors

scientific article

SalMotifDB: a tool for analyzing putative transcription factor binding sites in salmonid genomes

scientific article published on 02 September 2019

Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies)

scientific article published on 28 September 2015

Subfunctionalization versus neofunctionalization after whole-genome duplication

scientific article published on 01 July 2018

Synergy: a web resource for exploring gene regulation in Synechocystis sp. PCC6803

scientific article

The Atlantic salmon genome provides insights into rediploidization

scientific article

The Grayling Genome Reveals Selection on Gene Expression Regulation after Whole-Genome Duplication

article

The Norway spruce genome sequence and conifer genome evolution

scientific article

The Plant Genome Integrative Explorer Resource: PlantGenIE.org

scientific article published on 20 July 2015

Towards integration of population and comparative genomics in forest trees

scientific article

Using local gene expression similarities to discover regulatory binding site modules

scientific article published on 17 November 2006

Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts

scientific article

What can cold‐induced transcriptomes of Arctic Brassicaceae tell us about the evolution of cold tolerance?

scientific article published in 2022

Paulina is supported by:

About Paulina

Help