List of works - Taras Pogorelov

Ab initio protein structure prediction.

scientific article

Accelerating membrane insertion of peripheral proteins with a novel membrane mimetic model.

scientific article published in May 2012

Atomic-level description of protein-lipid interactions using an accelerated membrane model

scientific article published on 29 February 2016

Bioinformatic Mapping of Radical S-Adenosylmethionine-Dependent Ribosomally Synthesized and Post-Translationally Modified Peptides Identifies New Cα, Cβ, and Cγ-Linked Thioether-Containing Peptides

scientific article published on 13 May 2019

Bioinformatics-Guided Expansion and Discovery of Graspetides

scientific article published on 12 November 2021

C3-OH of Amphotericin B Plays an Important Role in Ion Conductance

scientific article

CHARMM-GUI HMMM Builder for Membrane Simulations with the Highly Mobile Membrane-Mimetic Model

scientific article

Calcium-Induced Lipid Nanocluster Structures: Sculpturing of the Plasma Membrane

scientific article published on 04 December 2018

Coaction of Electrostatic and Hydrophobic Interactions: Dynamic Constraints on Disordered TrkA Juxtamembrane Domain

scientific article published on 11 December 2019

Conformational Dynamics of the Human Islet Amyloid Polypeptide in a Membrane Environment: Toward the Aggregation Prone Form

scientific article published on 8 March 2016

Crowding, Sticking, and Partial Folding of GTT WW Domain in a Small Cytoplasm Model

scientific article published on 28 May 2020

Cytochrome c2Exit Strategy: Dissociation Studies and Evolutionary Implications

scientific article published on 01 January 2007

Discovery of Prenyltransferase Inhibitors with In Vitro and In Vivo Antibacterial Activity

scientific article published on 21 October 2020

Efficient Exploration of Membrane-Associated Phenomena at Atomic Resolution

scientific article published on 22 May 2015

Fast pressure-jump all-atom simulations and experiments reveal site-specific protein dehydration-folding dynamics

scientific article published on 05 March 2019

Filling up the heme pocket stabilizes apomyoglobin and speeds up its folding

scientific article

In-Cell Protein-Protein Contacts: Transient Interactions in the Crowd

scientific article published on 10 September 2019

Mapping fast protein folding with multiple-site fluorescent probes

scientific article published on 15 June 2015

Molecular determinants of phospholipid synergy in blood clotting

scientific article

Partitioning of amino acids into a model membrane: capturing the interface

scientific article published on 30 January 2014

Photodynamics in complex environments: ab initio multiple spawning quantum mechanical/molecular mechanical dynamics

scientific article

Protein-phospholipid interactions in blood clotting

scientific article published on 04 February 2010

Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.

scientific article published on 20 November 2017

Variations in the fast folding rates of the lambda-repressor: a hybrid molecular dynamics study

scientific article

List of works by Taras Pogorelov

Ab initio protein structure prediction.

Accelerating membrane insertion of peripheral proteins with a novel membrane mimetic model.

Atomic-level description of protein-lipid interactions using an accelerated membrane model

Bioinformatic Mapping of Radical S-Adenosylmethionine-Dependent Ribosomally Synthesized and Post-Translationally Modified Peptides Identifies New Cα, Cβ, and Cγ-Linked Thioether-Containing Peptides

Bioinformatics-Guided Expansion and Discovery of Graspetides

C3-OH of Amphotericin B Plays an Important Role in Ion Conductance

CHARMM-GUI HMMM Builder for Membrane Simulations with the Highly Mobile Membrane-Mimetic Model

Calcium-Induced Lipid Nanocluster Structures: Sculpturing of the Plasma Membrane

Coaction of Electrostatic and Hydrophobic Interactions: Dynamic Constraints on Disordered TrkA Juxtamembrane Domain

Conformational Dynamics of the Human Islet Amyloid Polypeptide in a Membrane Environment: Toward the Aggregation Prone Form

Crowding, Sticking, and Partial Folding of GTT WW Domain in a Small Cytoplasm Model

Cytochrome c2Exit Strategy: Dissociation Studies and Evolutionary Implications

Discovery of Prenyltransferase Inhibitors with In Vitro and In Vivo Antibacterial Activity

Efficient Exploration of Membrane-Associated Phenomena at Atomic Resolution

Fast pressure-jump all-atom simulations and experiments reveal site-specific protein dehydration-folding dynamics

Filling up the heme pocket stabilizes apomyoglobin and speeds up its folding

In-Cell Protein-Protein Contacts: Transient Interactions in the Crowd

Mapping fast protein folding with multiple-site fluorescent probes

Molecular determinants of phospholipid synergy in blood clotting

Partitioning of amino acids into a model membrane: capturing the interface

Photodynamics in complex environments: ab initio multiple spawning quantum mechanical/molecular mechanical dynamics

Protein-phospholipid interactions in blood clotting

Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.

Variations in the fast folding rates of the lambda-repressor: a hybrid molecular dynamics study