List of works - Leighton Pritchard

A general model of error-prone PCR

article

A novel non-protein-coding infection-specific gene family is clustered throughout the genome of Phytophthora infestans.

scientific article published in March 2007

A systems biology perspective on plant–microbe interactions: Biochemical and structural targets of pathogen effectors ⬇️

scientific article published on December 22, 2010

A translocation signal for delivery of oomycete effector proteins into host plant cells

scientific article published on 30 September 2007

Absence of Curli in Soil-Persistent Escherichia coli Is Mediated by a C-di-GMP Signaling Defect and Suggests Evidence of Biofilm-Independent Niche Specialization.

scientific article

Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains

scientific article

An RxLR effector from Phytophthora infestans prevents re-localisation of two plant NAC transcription factors from the endoplasmic reticulum to the nucleus.

scientific article

An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm

scientific article

Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues

scientific article published in 2009

Colonization outwith the colon: plants as an alternative environmental reservoir for human pathogenic enterobacteria

scientific article published on July 2009

Comparative genomics reveals what makes an enterobacterial plant pathogen

scientific article

Detection of phytopathogens of the genusDickeyausing a PCR primer prediction pipeline for draft bacterial genome sequences

Detection of the Bacterial Potato Pathogens Pectobacterium and Dickeya spp. Using Conventional and Real-Time PCR.

scientific article published on January 2015

Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum).

scientific article

Easy phylotyping of Escherichia coli via the EzClermont web app and command-line tool

scientific article published on 19 June 2020

Efflux Pump Gene Expression in Erwinia chrysanthemi Is Induced by Exposure to Phenolic Acids

article

Epidemiology of Dickeya dianthicola and Dickeya solani in ornamental hosts and potato studied using variable number tandem repeat analysis

scholarly article by Neil Parkinson et al published 4 September 2014 in European Journal of Plant Pathology

Evolutionary trace analysis of the Kunitz/BPTI family of proteins: functional divergence may have been based on conformational adjustment 1 1Edited by F. Cohen

article

Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus

scientific article

Families of short interspersed elements in the genome of the oomycete plant pathogen, Phytophthora infestans

scientific article published in April 2005

Galaxy as a platform for identifying candidate pathogen effectors.

scientific article

Galaxy tools and workflows for sequence analysis with applications in molecular plant pathology

scientific article published on 17 September 2013

Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors

scientific article published on 10 August 2011

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

scientific article

Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors.

scholarly article

Genome-wide analysis of the response of Dickeya dadantii 3937 to plant antimicrobial peptides.

scientific article published in April 2012

Genome-wide identification of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937.

scientific article

GenomeDiagram: a python package for the visualization of large-scale genomic data.

scientific article

Genomics and taxonomy in diagnostics for food security: soft-rotting enterobacterial plant pathogens

article

Identification and localisation of the NB-LRR gene family within the potato genome

scientific article

Involvement of cathepsin B in the plant disease resistance hypersensitive response

article

Mechanisms of Plant Colonization by Human Pathogenic Bacteria: An Emphasis on the Roots and Rhizosphere

article

Metabarcoding reveals a high diversity of woody host-associated spp. in soils at public gardens and amenity woodlands in Britain

scientific article published on 16 May 2019

Metagenomic Analysis of the Gut Microbiome of the Common Black Slug Arion ater in Search of Novel Lignocellulose Degrading Enzymes.

scientific article

Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens

scientific article

On the statistics of identifying candidate pathogen effectors

scientific article

Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance

scientific article published on 27 May 2008

Presence/absence, differential expression and sequence polymorphisms between PiAVR2 and PiAVR2-like in Phytophthora infestans determine virulence on R2 plants

article

Quorum sensing coordinates brute force and stealth modes of infection in the plant pathogen Pectobacterium atrosepticum

scientific article

Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations

scientific article published on 08 October 2013

Schemes of flux control in a model of Saccharomyces cerevisiae glycolysis

scientific article published in August 2002

The zigzag model of plant-microbe interactions: is it time to move on?

article

Toward collaborative open data science in metabolomics using Jupyter Notebooks and cloud computing

scientific article published on 14 September 2019

Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans.

scientific article published on 09 February 2009

Trafficking arms: oomycete effectors enter host plant cells

scientific article published on 13 December 2005

Using Tablet for visual exploration of second-generation sequencing data

scientific article

Why Genomics Research on Pectobacterium and Dickeya Makes a Difference

riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions

riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions.

scientific article published in June 2018

List of works by Leighton Pritchard

A general model of error-prone PCR

A novel non-protein-coding infection-specific gene family is clustered throughout the genome of Phytophthora infestans.

A systems biology perspective on plant–microbe interactions: Biochemical and structural targets of pathogen effectors ⬇️

A translocation signal for delivery of oomycete effector proteins into host plant cells

Absence of Curli in Soil-Persistent Escherichia coli Is Mediated by a C-di-GMP Signaling Defect and Suggests Evidence of Biofilm-Independent Niche Specialization.

Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains

An RxLR effector from Phytophthora infestans prevents re-localisation of two plant NAC transcription factors from the endoplasmic reticulum to the nucleus.

An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm

Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues

Colonization outwith the colon: plants as an alternative environmental reservoir for human pathogenic enterobacteria

Comparative genomics reveals what makes an enterobacterial plant pathogen

Detection of phytopathogens of the genusDickeyausing a PCR primer prediction pipeline for draft bacterial genome sequences

Detection of the Bacterial Potato Pathogens Pectobacterium and Dickeya spp. Using Conventional and Real-Time PCR.

Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum).

Easy phylotyping of Escherichia coli via the EzClermont web app and command-line tool

Efflux Pump Gene Expression in Erwinia chrysanthemi Is Induced by Exposure to Phenolic Acids

Epidemiology of Dickeya dianthicola and Dickeya solani in ornamental hosts and potato studied using variable number tandem repeat analysis

Evolutionary trace analysis of the Kunitz/BPTI family of proteins: functional divergence may have been based on conformational adjustment 1 1Edited by F. Cohen

Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus

Families of short interspersed elements in the genome of the oomycete plant pathogen, Phytophthora infestans

Galaxy as a platform for identifying candidate pathogen effectors.

Galaxy tools and workflows for sequence analysis with applications in molecular plant pathology

Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors.

Genome-wide analysis of the response of Dickeya dadantii 3937 to plant antimicrobial peptides.

Genome-wide identification of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937.

GenomeDiagram: a python package for the visualization of large-scale genomic data.

Genomics and taxonomy in diagnostics for food security: soft-rotting enterobacterial plant pathogens

Identification and localisation of the NB-LRR gene family within the potato genome

Involvement of cathepsin B in the plant disease resistance hypersensitive response

Mechanisms of Plant Colonization by Human Pathogenic Bacteria: An Emphasis on the Roots and Rhizosphere

Metabarcoding reveals a high diversity of woody host-associated spp. in soils at public gardens and amenity woodlands in Britain

Metagenomic Analysis of the Gut Microbiome of the Common Black Slug Arion ater in Search of Novel Lignocellulose Degrading Enzymes.

Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens

On the statistics of identifying candidate pathogen effectors

Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance

Presence/absence, differential expression and sequence polymorphisms between PiAVR2 and PiAVR2-like in Phytophthora infestans determine virulence on R2 plants

Quorum sensing coordinates brute force and stealth modes of infection in the plant pathogen Pectobacterium atrosepticum

Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations

Schemes of flux control in a model of Saccharomyces cerevisiae glycolysis

The zigzag model of plant-microbe interactions: is it time to move on?

Toward collaborative open data science in metabolomics using Jupyter Notebooks and cloud computing

Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans.

Trafficking arms: oomycete effectors enter host plant cells

Using Tablet for visual exploration of second-generation sequencing data

Why Genomics Research on Pectobacterium and Dickeya Makes a Difference

riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions

riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions.