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List of works by Nadeem O Kaakoush

A redox basis for metronidazole resistance in Helicobacter pylori

scientific article published on 17 February 2009

Alternating or continuous exposure to cafeteria diet leads to similar shifts in gut microbiota compared to chow diet.

scientific article

Autophagy in Helicobacter pylori Infection and Related Gastric Cancer.

scientific article published on 9 February 2015

Bacterial aetiological agents of intra-amniotic infections and preterm birth in pregnant women

scientific article published on 16 October 2013

Cafeteria diet and probiotic therapy: cross talk among memory, neuroplasticity, serotonin receptors and gut microbiota in the rat.

scientific article

Campylobacter concisus - A new player in intestinal disease.

scientific article

Campylobacter concisus and exotoxin 9 levels in paediatric patients with Crohn's disease and their association with the intestinal microbiota

scientific article

Campylobacter concisus pathotypes are present at significant levels in patients with gastroenteritis.

scientific article published on 23 December 2015

Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells.

scientific article published on 28 September 2016

Campylobacter concisus utilizes blood but not short chain fatty acids despite showing associations with Firmicutes taxa

scientific article published on 23 June 2016

Changes in gut microbiota in rats fed a high fat diet correlate with obesity-associated metabolic parameters

scientific article published on 18 May 2015

Comparative analyses of Campylobacter concisus strains reveal the genome of the reference strain BAA-1457 is not representative of the species

scientific article published on 13 October 2011

Comparative genomics of Campylobacter concisus isolates reveals genetic diversity and provides insights into disease association.

scientific article

Cross-talk among metabolic parameters, esophageal microbiota, and host gene expression following chronic exposure to an obesogenic diet

scientific article published on 31 March 2017

Defined microbiota transplant restores Th17/RORγt+ regulatory T cell balance in mice colonized with inflammatory bowel disease microbiotas

scientific article published on 18 August 2020

Detection of Helicobacteraceae in intestinal biopsies of children with Crohn's disease

scientific article

Did transmission of Helicobacter pylori from humans cause a disease outbreak in a colony of Stripe-faced Dunnarts (Sminthopsis macroura)?

scientific article

Do type VI secretion systems translocate more than proteins?

scientific article published on 11 January 2013

Donor Recruitment for Fecal Microbiota Transplantation

scientific article published on July 2015

Draft genome sequences of Helicobacter pylori isolates from Malaysia, cultured from patients with functional dyspepsia and gastric cancer.

scientific article published on October 2012

Dual role of Helicobacter and Campylobacter species in IBD: a systematic review and meta-analysis

scientific article

Dysbiosis of the microbiome in gastric carcinogenesis

scientific article

Editorial: metabolomic biomarkers for colorectal adenocarcinoma and in the differentiation between irritable bowel syndrome and ulcerative colitis in clinical remission-confounded by the gut microbiome?

scientific article published on 01 April 2019

Effect of exclusive enteral nutrition on the microbiota of children with newly diagnosed Crohn's disease

scientific article published on 15 January 2015

Effects of UVR exposure on the gut microbiota of mice and humans

scientific article published on 01 January 2020

Faecal Microbiota Transplantation for Inflammatory Bowel Disease: A Systematic Review and Meta-analysis

scientific article published on 9 May 2017

Faecal levels of zonula occludens toxin in paediatric patients with Crohn's disease and their association with the intestinal microbiota

scientific article published on 13 January 2015

Functional relationship between Campylobacter concisus and the stomach ecosystem in health and disease.

scientific article

Gastroenterologist perceptions of faecal microbiota transplantation.

scientific article

Gastrointestinal Pathobionts in Pediatric Crohn's Disease Patients

scientific article published on 17 July 2018

Genetic polymorphisms in the Toll-like receptor signalling pathway in Helicobacter pylori infection and related gastric cancer

scientific article published on 11 June 2014

Genome Sequence of Campylobacter showae UNSWCD, Isolated from a Patient with Crohn's Disease

scientific article published on January 2013

Global Epidemiology of Campylobacter Infection

scientific article

Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)

scientific article

Gut Microbiota in Children With Cystic Fibrosis: A Taxonomic and Functional Dysbiosis

scientific article published on 09 December 2019

Gut microbiome analysis identifies potential aetiological factors in acute gastroenteritis

scientific article published on 23 April 2018

Helicobacter pylori disulphide reductases: role in metronidazole reduction

scientific article published in May 2005

High Dose Vitamin D supplementation alters faecal microbiome and predisposes mice to more severe colitis

scientific article published on 31 July 2018

Host attachment, invasion, and stimulation of proinflammatory cytokines by Campylobacter concisus and other non-Campylobacter jejuni Campylobacter species.

scientific article

Identification of disulfide reductases in Campylobacterales: a bioinformatics investigation

scientific article published on 21 June 2007

Immunoglobulin G response in patients with Campylobacter concisus diarrhea.

scientific article

Immunoreactive proteins of Campylobacter concisus, an emergent intestinal pathogen

scientific article published on 26 September 2011

Inflammatory bowel disease therapies and gut function in a colitis mouse model.

scientific article published on 6 August 2013

Insights into the Role of Erysipelotrichaceae in the Human Host.

scientific article published on 20 November 2015

Insights into the molecular basis of the microaerophily of three Campylobacterales: a comparative study

scientific article published on 08 August 2009

Investigation of motility and biofilm formation by intestinal Campylobacter concisus strains.

scientific article published on 14 December 2012

Is Campylobacter to esophageal adenocarcinoma as Helicobacter is to gastric adenocarcinoma?

scientific article published on 27 April 2015

Is Helicobacter pylori a true microaerophile?

scientific article

Is there a role for stool metabolomics in cystic fibrosis?

scientific article published in August 2016

Microbial dysbiosis in pediatric patients with Crohn's disease

scientific article

Microbiome and Esophageal Adenocarcinoma-Letter

scientific article published on 28 February 2018

Molecular responses of Campylobacter jejuni to cadmium stress

scientific article

More Flavor for Flavonoid-Based Interventions?

scientific article published on 17 March 2017

Multi-omics of the esophageal microenvironment identifies signatures associated with progression of Barrett's esophagus

scientific article published on 19 August 2021

Multidonor intensive faecal microbiota transplantation for active ulcerative colitis: a randomised placebo-controlled trial.

scientific article published on 14 February 2017

NAFLD, Helicobacter species and the intestinal microbiome.

scientific article

Novel genetic markers define a subgroup of pathogenic Escherichia coli strains belonging to the B2 phylogenetic group

scientific article published on 12 October 2015

OPCML is hypermethylated in a subset of patients with metaplastic changes in their esophagus

scientific article published on 07 December 2018

Oxygen requirement and tolerance of Campylobacter jejuni

scientific article published on 07 August 2007

Pathogenic Potential of Campylobacter ureolyticus

scientific article published on November 28, 2011

Pattern-recognition receptors and gastric cancer

scientific article

Phosphonate metabolism in Helicobacter pylori

scientific article published on 20 October 2009

Potential involvement of Campylobacter curvus and Haemophilus parainfluenzae in preterm birth.

scientific article

Potential role of thiol:disulfide oxidoreductases in the pathogenesis of Helicobacter pylori.

scientific article published on 22 May 2007

Presence of gastric pepsinogen in the trachea is associated with altered inflammation and microbial composition

scientific article published on 08 September 2020

Prevalence of Campylobacter species in adult Crohn's disease and the preferential colonization sites of Campylobacter species in the human intestine

scientific article

Reduction in Gut Microbial Diversity as a Mechanism of Action of Exclusive Enteral Nutrition

scientific article published in July 2016

Response to faecal microbiota transplantation in ulcerative colitis is not sustained long term following induction therapy

scientific article published on 10 December 2020

Sequencing and Validation of the Genome of a Campylobacter concisus Reveals Intra-Species Diversity

scientific article published on July 29, 2011

Signatures within the esophageal microbiome are associated with host genetics, age, and disease

article

The NOD-like receptor signalling pathway in Helicobacter pylori infection and related gastric cancer: a case-control study and gene expression analyses

scientific article

The NOD-like receptor signalling pathway in Helicobacter pylori infection and related gastric cancer: a case-control study and gene expression analyses

scientific article published in PLoS ONE

The cag PAI is intact and functional but HP0521 varies significantly in Helicobacter pylori isolates from Malaysia and Singapore

scientific article published on 16 February 2010

The effect of short-term exposure to energy-matched diets enriched in fat or sugar on memory, gut microbiota and markers of brain inflammation and plasticity

scientific article published on 20 July 2016

The interplay between Campylobacter and Helicobacter species and other gastrointestinal microbiota of commercial broiler chickens

scientific article

The oesophageal microbiome: an unexplored link in obesity-associated oesophageal adenocarcinoma.

scientific article

The pathogenic potential of Campylobacter concisus strains associated with chronic intestinal diseases

scientific article

The pathogenic potential of Helicobacter pullorum: possible role for the type VI secretion system.

scientific article

The prevalence of the duodenal ulcer promoting gene (dupA) in Helicobacter pylori isolates varies by ethnic group and is not universally associated with disease development: a case-control study

scientific article published on 11 March 2009

The role of TLR2, TLR4 and CD14 genetic polymorphisms in gastric carcinogenesis: a case-control study and meta-analysis.

scientific article

The role of autophagy in the intracellular survival of Campylobacter concisus

scientific article

The role of bacteria and pattern-recognition receptors in Crohn's disease.

scientific article

The secretome of Campylobacter concisus

scientific article

The secretome of Helicobacter trogontum.

scientific article

Tools to covisualize and coanalyze proteomic data with genomes and transcriptomes: validation of genes and alternative mRNA splicing

scientific article

Transcriptomic and proteomic analyses reveal key innate immune signatures in the host response to the gastrointestinal pathogen Campylobacter concisus

scientific article

Ultraviolet Irradiation of Skin Alters the Faecal Microbiome Independently of Vitamin D in Mice

scientific article published on 11 August 2018