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List of works by Dario Greco

19p13.1 is a triple-negative-specific breast cancer susceptibility locus

scientific article published on 13 February 2012

A Single Aspiration of Rod-like Carbon Nanotubes Induces Asbestos-like Pulmonary Inflammation Mediated in Part by the IL-1 Receptor.

scientific article published on 5 June 2015

A common variant at the TERT-CLPTM1L locus is associated with estrogen receptor-negative breast cancer

scientific article published on 30 October 2011

A meta-analysis of genome-wide association studies of breast cancer identifies two novel susceptibility loci at 6q14 and 20q11.

scientific article

A mitochondrial ribosomal and RNA decay pathway blocks cell proliferation.

scientific article published on 28 February 2013

A multi-view genomic data simulator

scientific article

A robust and accurate method for feature selection and prioritization from multi-class OMICs data

scientific article

A secretomics analysis reveals major differences in the macrophage responses towards different types of carbon nanotubes.

scientific article published on 17 October 2014

Acinetobacter species in the skin microbiota protect against allergic sensitization and inflammation

scientific article

Age-associated DNA methylation changes in immune genes, histone modifiers and chromatin remodeling factors within 5 years after birth in human blood leukocytes

scientific article

Aging bone marrow mesenchymal stromal cells have altered membrane glycerophospholipid composition and functionality

scientific article published on 27 December 2012

Altered expression of mitochondrial and extracellular matrix genes in the heart of human fetuses with chromosome 21 trisomy

scientific article

Altered midbrain dopaminergic neurotransmission during development in an animal model of ADHD.

scientific article published on November 2003

An ancestral molecular response to nanomaterial particulates

An association analysis of circadian genes in anxiety disorders

scientific article published in February 2010

An integrated quantitative structure and mechanism of action-activity relationship model of human serum albumin binding.

scientific article published on 6 June 2019

Azacitidine induces profound genome-wide hypomethylation in primary myelodysplastic bone marrow cultures but may also reduce histone acetylation

scientific article published on 12 September 2013

BACA: bubble chArt to compare annotations.

scientific article published on 5 February 2015

BMDx: a graphical Shiny application to perform Benchmark Dose analysis for transcriptomics data

scientific article published on 17 January 2020

Bayesian integrated modeling of expression data: a case study on RhoG.

scientific article

Breast tumors from CHEK2 1100delC-mutation carriers: genomic landscape and clinical implications

scientific article published on 20 September 2011

CONDOP: an R package for CONdition-Dependent Operon Predictions

scientific article published on 13 June 2016

Can an InChI for Nano Address the Need for a Simplified Representation of Complex Nanomaterials across Experimental and Nanoinformatics Studies?

scientific article published on 11 December 2020

Carbon Nanomaterials Promote M1/M2 Macrophage Activation

scientific article published on 06 April 2020

Common breast cancer susceptibility loci are associated with triple-negative breast cancer

scientific article published on 15 August 2011

Comparison of dorsocervical with abdominal subcutaneous adipose tissue in patients with and without antiretroviral therapy-associated lipodystrophy.

scientific article

Comparison of gene expression profile in embryonic mesencephalon and neuronal primary cultures

scientific article

Covid-19 acute responses and possible long term consequences: What nanotoxicology can teach us

scientific article published on 10 August 2020

DNA sequence context as a marker of CpG methylation instability in normal and cancer tissues

scientific article published on 03 February 2020

Deep sequencing of blood and gut T-cell receptor β-chains reveals gluten-induced immune signatures in celiac disease

scientific article published on 21 December 2017

Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility

scientific article

Differentially methylated regions in maternal and paternal uniparental disomy for chromosome 7.

scientific article

Divergent genes in potential inoculant Sinorhizobium strains are related to DNA replication, recombination, and repair

scientific article

Drug repositioning: a machine-learning approach through data integration

scientific article

ESPERANTO: a GLP-field sEmi-SuPERvised toxicogenomics metadAta curatioN TOol

scientific article published in 2023

Effectiveness of projection techniques in genomic data analysis

Erratum to: “Neuropeptide S receptor 1 (NPSR1) activates cancer-related pathways and is widely expressed in neuroendocrine tumors.

scientific article published on 3 July 2014

Expansion induced microRNA changes in bone marrow mesenchymal stromal cells reveals interplay between immune regulation and cell cycle.

scientific article published on 9 November 2016

Experience-dependent expression of NPAS4 regulates plasticity in adult visual cortex

scientific article published on 6 June 2012

Expression of DAI by an oncolytic vaccinia virus boosts the immunogenicity of the virus and enhances antitumor immunity

scientific article published on 23 March 2016

FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments

article

Gain-of-function CEBPE mutation causes noncanonical autoinflammatory inflammasomopathy

scientific article published on 13 June 2019

Gene expression analysis of Drosophilaa Manf mutants reveals perturbations in membrane traffic and major metabolic changes.

scientific article

Gene expression in human NAFLD.

scientific article

Gene expression patterns underlying the reinstatement of plasticity in the adult visual system

scientific article published on 26 June 2013

Gene expression profiling of U12-type spliceosome mutant Drosophila reveals widespread changes in metabolic pathways

scientific article

Genetic Control of Myelin Plasticity after Chronic Psychosocial Stress

scientific article published on 11 July 2018

Genetic modifiers of CHEK2*1100delC-associated breast cancer risk

scientific article published on 06 October 2016

Genome-wide association studies identify four ER negative-specific breast cancer risk loci

scientific article published in April 2013

Genome-wide association study identifies 25 known breast cancer susceptibility loci as risk factors for triple-negative breast cancer

scientific article published on 9 December 2013

Global analysis of the nuclear processing of transcripts with unspliced U12-type introns by the exosome

scientific article

Glycodelin expression associates with differential tumour phenotype and outcome in sporadic and familial non-BRCA1/2 breast cancer patients

article published in 2010

Gremlin-1 Overexpression in Mouse Lung Reduces Silica-Induced Lymphocyte Recruitment - A Link to Idiopathic Pulmonary Fibrosis through Negative Correlation with CXCL10 Chemokine

scientific article

Human papillomavirus 16 E5 modulates the expression of host microRNAs

scientific article

Hypomethylation of HOXA4 promoter is common in Silver-Russell syndrome and growth restriction and associates with stature in healthy children

scientific article published on 16 November 2017

IL-17/Th17 pathway is activated in acne lesions

scientific article

INSIdE NANO: a systems biology framework to contextualize the mechanism-of-action of engineered nanomaterials

scientific article published in Scientific Reports

INfORM: Inference of NetwOrk Response Modules

scientific article published on 7 February 2018

Influence of FLG loss-of-function mutations in host–microbe interactions during atopic skin inflammation

Inhalation and Oropharyngeal Aspiration Exposure to Rod-Like Carbon Nanotubes Induce Similar Airway Inflammation and Biological Responses in Mouse Lungs.

scientific article published on 3 January 2017

Inhalation of rod-like carbon nanotubes causes unconventional allergic airway inflammation

scientific article

IntEREst: intron-exon retention estimator.

scientific article

Integration of genome-wide mRNA and miRNA expression, and DNA methylation data of three cell lines exposed to ten carbon nanomaterials

scientific article published on 25 May 2018

Killer-cell immunoglobulin-like receptor gene profile predicts good molecular response to dasatinib therapy in chronic myeloid leukemia.

scientific article

Knowledge Generation with Rule Induction in Cancer Omics

scientific article published on 18 December 2019

Leptin-Induced mTOR Activation Defines a Specific Molecular and Transcriptional Signature Controlling CD4+ Effector T Cell Responses ⬇️

scientific article published on August 17, 2012

MVDA: a multi-view genomic data integration methodology

scientific article

Machine-learning-driven biomarker discovery for the discrimination between allergic and irritant contact dermatitis

scientific article published on 14 December 2020

Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients

scientific article published on 13 October 2020

Manually curated transcriptomics data collection for toxicogenomic assessment of engineered nanomaterials

publication published on 08 February 2021

MiR-34a expression has an effect for lower risk of metastasis and associates with expression patterns predicting clinical outcome in breast cancer

scientific article

MicroRNA expression profiling reveals miRNA families regulating specific biological pathways in mouse frontal cortex and hippocampus

scientific article

MicroRNA related polymorphisms and breast cancer risk

scientific article

Microarray analysis of a Chlamydia pneumoniae-infected human epithelial cell line by use of gene ontology hierarchy.

scientific article published on January 2008

Microbe-host interplay in atopic dermatitis and psoriasis

scientific article published on 16 October 2019

Microbial and transcriptional differences elucidate atopic dermatitis heterogeneity across skin sites

scientific article published on 01 October 2020

Molecular Signature of Asthma-Enhanced Sensitivity to CuO Nanoparticle Aerosols from 3D Cell Model

scientific article published on 17 June 2019

Multi-omics analysis of ten carbon nanomaterials effects highlights cell type specific patterns of molecular regulation and adaptation

scientific article published on 01 July 2018

Multiparametric Profiling of Engineered Nanomaterials: Unmasking the Surface Coating Effect

scientific article published on 11 October 2020

NQO1 expression correlates inversely with NFκB activation in human breast cancer

article published in 2011

Nano-sized zinc oxide and silver, but not titanium dioxide, induce innate and adaptive immunity and antiviral response in differentiated THP-1 cells.

scientific article published on 29 September 2017

Nasal mucosa and blood cell transcriptome profiles do not reflect respiratory symptoms associated with moisture damage

scientific article published on 04 May 2018

Network Analysis Reveals Similar Transcriptomic Responses to Intrinsic Properties of Carbon Nanomaterials in Vitro and in Vivo.

scientific article

Neuropeptide S receptor 1 (NPSR1) activates cancer-related pathways and is widely expressed in neuroendocrine tumors.

scientific article

Patient survival and tumor characteristics associated with CHEK2:p.I157T - findings from the Breast Cancer Association Consortium

scientific article published on 03 October 2016

Peanut oral immunotherapy decreases IgE to Ara h 2 and Ara h 6 but does not enhance sensitization to cross-reactive allergens

scientific article published on 01 December 2016

Peanut oral immunotherapy increases IgG4 to Ara h 1, 2, and 6 but does not affect IgG4 to other allergens

scientific article published on 31 January 2019

Phosphorylation of NFATC1 at PIM1 target sites is essential for its ability to promote prostate cancer cell migration and invasion

scientific article published on 15 November 2019

Physiology, pathology and relatedness of human tissues from gene expression meta-analysis

scientific article

Pre-filtering improves reliability of Affymetrix GeneChips results when used to analyze gene expression in complex tissues

article

Proteomics and transcriptomics characterization of bile stress response in probiotic Lactobacillus rhamnosus GG.

scientific article

Re-analysis of bipolar disorder and schizophrenia gene expression complements the Kraepelinian dichotomy

scientific article published on January 2012

Representing and describing nanomaterials in predictive nanoinformatics

scientific article published on 18 August 2022

Risk of childhood asthma is associated with CpG-site polymorphisms, regional DNA methylation and mRNA levels at the GSDMB/ORMDL3 locus

scientific article

Strong conservation of inbred mouse strain microRNA loci but broad variation in brain microRNAs due to RNA editing and isomiR expression.

scientific article published on 14 February 2018

Suppression of BRCA1 sensitizes cells to proteasome inhibitors

scientific article

Surface PEGylation suppresses pulmonary effects of CuO in allergen-induced lung inflammation

scientific article published on 05 July 2019

Targeted Analysis of Serum Proteins Encoded at Known Inflammatory Bowel Disease Risk Loci

article

The Cu,Zn superoxide dismutase in neuroblastoma SK-N-BE cells is exported by a microvesicles dependent pathway

scientific article

The SNP rs6500843 in 16p13.3 is associated with survival specifically among chemotherapy-treated breast cancer patients

scientific article published on April 2015

The impact of Crohn's disease genes on healthy human gut microbiota: a pilot study

scientific article published on 7 January 2013

The oxysterol receptor LXRβ protects against DSS- and TNBS-induced colitis in mice

scientific article published on 07 May 2014

The role of genetic breast cancer susceptibility variants as prognostic factors

scientific article

The role of proteases in fibronectin matrix remodeling in thyroid epithelial cell monolayer cultures.

scientific article

Toward Rigorous Materials Production: New Approach Methodologies Have Extensive Potential to Improve Current Safety Assessment Practices

scientific article published on 08 January 2020

Toxicogenomic Profiling of 28 Nanomaterials in Mouse Airways

scientific article published on 08 March 2021

Transcriptome dynamics-based operon prediction in prokaryotes.

scientific article

Transcriptomics in Toxicogenomics, Part I: Experimental Design, Technologies, Publicly Available Data, and Regulatory Aspects

scientific article published on 15 April 2020

Transcriptomics in Toxicogenomics, Part II: Preprocessing and Differential Expression Analysis for High Quality Data

scientific article published on 08 May 2020

Transcriptomics in Toxicogenomics, Part III: Data Modelling for Risk Assessment

scientific article published on 08 April 2020

VOLTA: adVanced mOLecular neTwork Analysis

scientific article published in 2021

Variants on the promoter region of PTEN affect breast cancer progression and patient survival

scientific article published on 15 December 2011

What dictates the accumulation of desmosterol in the developing brain?

scientific article published on 10 December 2012

eUTOPIA: solUTion for Omics data PreprocessIng and Analysis

scientific article published on 29 January 2019

miR-34b/c Regulates Wnt1 and Enhances Mesencephalic Dopaminergic Neuron Differentiation.

scientific article published on 2 March 2018

miRSeqNovel: an R based workflow for analyzing miRNA sequencing data

scientific article

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