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List of works by Bernd Weisshaar

A Chromosome-level Sequence Assembly Reveals the Structure of the Arabidopsis thaliana Nd-1 Genome and its Gene Set

article

A De Novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny

scientific article

A High Frequency Mutation Starts Sexual Reproduction in Volvox carteri

scientific article published in 1984

A Partially Phase-Separated Genome Sequence Assembly of the Vitis Rootstock 'Börner' (Vitis riparia × Vitis cinerea) and Its Exploitation for Marker Development and Targeted Mapping

scientific article published on 04 March 2020

A WD40-repeat gene from Malus x domestica is a functional homologue of Arabidopsis thaliana TRANSPARENT TESTA GLABRA1.

scientific article

A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set

scientific article published on 21 May 2019

A multilocus sequence survey in Arabidopsis thaliana reveals a genome-wide departure from a neutral model of DNA sequence polymorphism

scientific article published on 16 January 2005

A new Apa LI restriction fragment length polymorphism in the low density lipoprotein receptor gene

article

A simplified method for the analysis of transcription factor-promoter interactions that allows high-throughput data generation

scientific article

A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters

scientific article

A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii

scientific article

A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii

scientific article published on 7 December 2010

A. thaliana TRANSPARENT TESTA 1 is involved in seed coat development and defines the WIP subfamily of plant zinc finger proteins

scientific article

An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics

scientific article published in September 2003

An abundant and heavily truncated non-LTR retrotransposon (LINE) family in Beta vulgaris

scientific article published on December 2009

An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana

scientific article published on 13 September 2014

Analysis of DNA polymorphisms in sugar beet (Beta vulgaris L.) and development of an SNP-based map of expressed genes

scientific article published on 11 July 2007

Analysis of PRODUCTION OF FLAVONOL GLYCOSIDES-dependent flavonol glycoside accumulation in Arabidopsis thaliana plants reveals MYB11-, MYB12- and MYB111-independent flavonol glycoside accumulation

scientific article published on 20 August 2010

Analysis of T-DNA insertion site distribution patterns in Arabidopsis thaliana reveals special features of genes without insertions

article

Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris

scientific article

Analyzing Synthetic Promoters Using Arabidopsis Protoplasts

scientific article published in January 2016

Arabidopsis thaliana expresses a second functional flavonol synthase

scientific article published on 10 May 2009

Arrangement and expression of integrated adenovirus type 12 DNA in the transformed hamster cell line HA12/7: amplification of Ad12 and c-myc DNAs and evidence for hybrid viral-cellular transcripts

AtMYB12 regulates caffeoyl quinic acid and flavonol synthesis in tomato: expression in fruit results in very high levels of both types of polyphenol

scientific article published on 4 July 2008

CPRF4a, a novel plant bZIP protein of the CPRF family: comparative analyses of light-dependent expression, post-transcriptional regulation, nuclear import and heterodimerisation

scientific article published in April 1998

Candidate genes within a 143 kb region of the flower sex locus in Vitis

scientific article published on 19 January 2012

Characterization of genes and alleles involved in the control of flowering time in grapevine

scientific article published on 03 July 2019

Characterization of the <i>Brassica napus</i> Flavonol Synthase Gene Family Reveals Bifunctional Flavonol Synthases

scientific article published on 13 October 2021

Characterization of tt15 , a novel transparent testa mutant of Arabidopsis thaliana (L.) Heynh

scientific article published on 01 May 1999

Chloroplast Genome Sequence of Arabidopsis thaliana Accession Landsberg erecta, Assembled from Single-Molecule, Real-Time Sequencing Data.

scientific article

Comparative genomics and regulatory evolution: conservation and function of the Chs and Apetala3 promoters

scientific article

Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments

scientific article

Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora

scientific article

Complete genome sequence of Listeria seeligeri, a nonpathogenic member of the genus Listeria

scientific article published on 8 January 2010

Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives

scientific article published on 10 February 2022

Comprehensive identification of Arabidopsis thaliana MYB transcription factors interacting with R/B-like BHLH proteins

scientific article

Consideration of non-canonical splice sites improves gene prediction on the Arabidopsis thaliana Niederzenz-1 genome sequence

scientific article published on 4 December 2017

Construction and characterization of a sugar beet (Beta vulgaris) fosmid library.

scientific article

Construction of a 'unigene' cDNA clone set by oligonucleotide fingerprinting allows access to 25 000 potential sugar beet genes

scientific article

Crop wild relative populations of Beta vulgaris allow direct mapping of agronomically important genes

scientific article published on 6 June 2017

Differential combinatorial interactions of cis-acting elements recognized by R2R3-MYB, BZIP, and BHLH factors control light-responsive and tissue-specific activation of phenylpropanoid biosynthesis genes

scientific article published in January 2005

Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling

scientific article published on 5 April 2007

Diversification, evolution and methylation of short interspersed nuclear element families in sugar beet and related Amaranthaceae species

scientific article published on 16 December 2015

Diversity of a complex centromeric satellite and molecular characterization of dispersed sequence families in sugar beet (Beta vulgaris).

scientific article

EST Sequencing, Annotation and Macroarray Transcriptome Analysis Identify Preferentially Root-Expressed Genes in Sugar Beet

article

Elongation-related functions of LEAFY COTYLEDON1 during the development of Arabidopsis thaliana

scientific article

Enhancing the GABI-Kat Arabidopsis thaliana T-DNA Insertion Mutant Database by Incorporating Araport11 Annotation

scientific article published on 23 December 2016

Epigenetic profiling of heterochromatic satellite DNA.

scientific article

Establishment of a high-efficiency SNP-based framework marker set for Arabidopsis.

scientific article published in October 2003

Evolution of tonoplast P-ATPase transporters involved in vacuolar acidification.

scientific article published on 23 May 2016

Evolutionary reshuffling in the Errantivirus lineage Elbe within the Beta vulgaris genome

scientific article

Exploiting single-molecule transcript sequencing for eukaryotic gene prediction

scientific article

Expression analysis of flavonoid biosynthesis genes during Arabidopsis thaliana silique and seed development with a primary focus on the proanthocyanidin biosynthetic pathway

scientific article

FRU(BHLH029) is required for induction of iron mobilization genes inArabidopsis thaliana

article

Familial defective apolipoprotein B-100 in 12 subjects and their kindred

scientific article published on November 1, 1992

Fast forward genetics to identify mutations causing a high light tolerant phenotype in Chlamydomonas reinhardtii by whole-genome-sequencing

scientific article published on 6 February 2015

Function search in a large transcription factor gene family in Arabidopsis: assessing the potential of reverse genetics to identify insertional mutations in R2R3 MYB genes

scientific article published in October 1999

Functional analysis of a light-responsive plant bZIP transcriptional regulator

scientific article published on November 1994

GABI-DUPLO: a collection of double mutants to overcome genetic redundancy in Arabidopsis thaliana

scientific article

GABI-Kat SimpleSearch: a flanking sequence tag (FST) database for the identification of T-DNA insertion mutants in Arabidopsis thaliana

scientific article published in July 2003

GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions

scientific article published on 24 October 2006

GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database

scientific article

Genome Sequences of Both Organelles of the Grapevine Rootstock Cultivar 'Börner'

scientific article published on 09 April 2020

Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2

scientific article published on 07 January 2020

Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.

scientific article

Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet (Beta vulgaris)

scientific article

High Contiguity De Novo Genome Sequence Assembly of Trifoliate Yam (Dioscorea dumetorum) Using Long Read Sequencing

scientific article published on 04 March 2020

High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines

scientific article published in December 2003

High-throughput identification of genetic markers using representational oligonucleotide microarray analysis

scientific article published on 9 April 2010

Highly diverse chromoviruses of Beta vulgaris are classified by chromodomains and chromosomal integration

scientific article

Homodimeric and heterodimeric leucine zipper proteins and nuclear factors from parsley recognize diverse promoter elements with ACGT cores

scientific article published in 1992

Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system

scientific article published in March 1998

Identification of the Arabidopsis thaliana Flavonoid 3'-Hydroxylase Gene and Functional Expression of the Encoded P450 Enzyme

article

Improved detection of familial defective apolipoprotein B-100 by restriction-site-introducing polymerase chain reaction

scientific article published on 01 September 1993

Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes

scientific article

Iron assimilation and transcription factor controlled synthesis of riboflavin in plants

scientific article published on 27 January 2007

Iron deficiency-mediated stress regulation of four subgroup Ib BHLH genes in Arabidopsis thaliana

article

Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.).

scientific article published in February 2003

Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes.

scientific article published on October 1998

Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis

scientific article published on 06 August 2021

Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana

scientific article

Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes

scientific article

LucTrap vectors are tools to generate luciferase fusions for the quantification of transcript and protein abundance in vivo.

scientific article published in May 2006

MYB transcription factors in Arabidopsis

scientific article published on 30 July 2010

MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana

scientific article

Metabolomic and genetic analyses of flavonol synthesis in Arabidopsis thaliana support the in vivo involvement of leucoanthocyanidin dioxygenase

scientific article

Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6.

scientific article published on 29 December 2015

Palaeohexaploid ancestry for Caryophyllales inferred from extensive gene-based physical and genetic mapping of the sugar beet genome (Beta vulgaris).

scientific article

PcMYB1, a novel plant protein containing a DNA-binding domain with one MYB repeat, interacts in vivo with a light-regulatory promoter unit

scientific article published in May 1997

Plant genome sequencing - applications for crop improvement

scientific article published on 21 September 2013

Polyubiquitin gene expression and structural properties of the ubi4-2 gene in Petroselinum crispum.

scientific article published in February 1993

Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades.

scientific article

Promoter elements of the mustard CHS1 gene are sufficient for light regulation in transgenic plants

scientific article published in May 1995

QTL analysis of flowering time and ripening traits suggests an impact of a genomic region on linkage group 1 in Vitis

scientific article

RNA-Seq Time Series of Vitis vinifera Bud Development Reveals Correlation of Expression Patterns with the Local Temperature Profile

scientific article published on 12 November 2020

Rapid diagnosis of familial defective apolipoprotein B-100.

scientific article

Rapid gene identification in sugar beet using deep sequencing of DNA from phenotypic pools selected from breeding panels

scientific article

Reactivation of the methylation-inactivated late E2A promoter of adenovirus type 2 by E1A (13 S) functions

scientific article published on 01 July 1988

ReadXplorer 2-detailed read mapping analysis and visualization from one single source.

scientific article

Reference-based QUantification Of gene Dispensability (QUOD)

scientific article published on 09 February 2021

Regulatory elements required for light-mediated expression of the Petroselinum crispum chalcone synthase gene

scientific article published on January 1, 1991

Reliable in silico identification of sequence polymorphisms and their application for extending the genetic map of sugar beet (Beta vulgaris).

scientific article

Repeat Composition of CenH3-chromatin and H3K9me2-marked heterochromatin in Sugar Beet (Beta vulgaris).

scientific article

Resources for Reverse Genetics Approaches in Arabidopsis thaliana

article

SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome

scientific article published on 16 September 2015

SNP frequency and allelic haplotype structure of Beta vulgaris expressed genes

Sequence of a histone H2A cDNA from parsley.

scientific article published on October 1990

Survey of sugar beet (Beta vulgaris L.) hAT transposons and MITE-like hATpin derivatives

scientific article

T-DNA–mediated transfer of Agrobacterium tumefaciens chromosomal DNA into plants

article

TRANSPARENT TESTA 13 is a tonoplast P3A -ATPase required for vacuolar deposition of proanthocyanidins in Arabidopsis thaliana seeds

scientific article published on June 2015

TRANSPARENT TESTA1 interacts with R2R3-MYB factors and affects early and late steps of flavonoid biosynthesis in the endothelium of Arabidopsis thaliana seeds.

scientific article published on 11 May 2011

TT2, TT8, and TTG1 synergistically specify the expression of BANYULS and proanthocyanidin biosynthesis in Arabidopsis thaliana.

scientific article published in August 2004

Targeted identification of short interspersed nuclear element families shows their widespread existence and extreme heterogeneity in plant genomes

scientific article published on 9 September 2011

The Arabidopsis thylakoid protein PAM68 is required for efficient D1 biogenesis and photosystem II assembly.

scientific article

The Arabidopsis transcription factor MYB12 is a flavonol-specific regulator of phenylpropanoid biosynthesis

scientific article published on 27 May 2005

The AtMYB12 activation domain maps to a short C-terminal region of the transcription factor

scientific article published on 11 March 2017

The CHH motif in sugar beet satellite DNA: a modulator for cytosine methylation

article by Falk Zakrzewski et al published 21 May 2014 in The Plant Journal

The R2R3-MYB gene family in Arabidopsis thaliana

scientific article (publication date: October 2001)

The R2R3-MYB gene family in banana (Musa acuminata): Genome-wide identification, classification and expression patterns

scientific article published on 06 October 2020

The Structural Features of Thousands of T-DNA Insertion Sites Are Consistent with a Double-Strand Break Repair-Based Insertion Mechanism.

scientific article published on 4 September 2015

The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.

scientific article

The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis

scientific article

The genome of the mesopolyploid crop species Brassica rapa

scientific article (publication date: 28 August 2011)

The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

scientific article

The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries

scientific article published on 9 September 2009

The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing

scientific article

The role of a pseudo-response regulator gene in life cycle adaptation and domestication of beet.

scientific article

The transcription factor HIG1/MYB51 regulates indolic glucosinolate biosynthesis in Arabidopsis thaliana

scientific article published on 25 April 2007

The transcriptional regulator CPRF1: expression analysis and gene structure

scientific article published in July 1996

The transcriptional regulatorCPRF1: expression analysis and gene structure

article

The transition to flowering in winter rapeseed during vernalization

scientific article published on 15 November 2020

TheArabidopsisbZIP transcription factor HY5 regulates expression of thePFG1/MYB12gene in response to light and ultraviolet-B radiation

article

Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon

scientific article published on 22 June 2012

Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana.

scientific article published on October 1998

Trace2PS and FSA2PS: two software toolkits for converting trace and fsa files to PostScript format

scientific article published on 21 July 2009

Transactivation properties of parsley proline-rich bZIP transcription factors

scientific article published on 01 April 2000

Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis

scientific article

Transcriptomic analysis of temporal shifts in berry development between two grapevine cultivars of the Pinot family reveals potential genes controlling ripening time

scientific article published on 07 July 2021

Twenty-Five Years of Propagation in Suspension Cell Culture Results in Substantial Alterations of the Arabidopsis Thaliana Genome

scientific article published on 02 September 2019

Two differentially expressed MATE factor genes from apple complement the Arabidopsis transparent testa12 mutant

scientific article published in January 2011

Two distinct cis-acting elements are involved in light-dependent activation of the pea elip promoter

scientific article published on 01 November 1994

Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids

scientific article

Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana

article

Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection

scientific article published on 06 June 2014

Use of Mutants from T-DNA Insertion Populations Generated by High-Throughput Screening

Weird fingers: Functional analysis of WIP domain proteins

article

Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes

scientific article published on 25 August 2006

bZIP transcription factors in Arabidopsis

scientific article

c-MYB oncogene-like genes encoding three MYB repeats occur in all major plant lineages

scientific article published on 01 January 2000