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List of works by Richard Cronn

A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation.

scientific article

A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae

scientific article published on 20 September 2019

A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny

scientific article

Adventures in the enormous: a 1.8 million clone BAC library for the 21.7 Gb genome of loblolly pine

scientific article

Alignment-free genome comparison enables accurate geographic sourcing of white oak DNA

scientific article published on 10 December 2018

An empirical evaluation of two-stage species tree inference strategies using a multilocus dataset from North American pines

scientific article

Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing.

scientific article

Comparative Transcriptomics Among Four White Pine Species

scientific article published on 20 March 2018

Comparative development of fiber in wild and cultivated cotton

scientific article published in January 2001

Cryptic repeated genomic recombination during speciation in Gossypium gossypioides

scientific article published in November 2003

Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus)

scientific article

Development of novel chloroplast microsatellite markers to identify species in the Agrostis complex (Poaceae) and related genera

scientific article published on 20 January 2010

Direct comparisons of inhibitor sensitivities of reverse transcriptases from feline and human immunodeficiency viruses

scientific article

Duplicated genes evolve independently after polyploid formation in cotton

scientific article published on December 1999

Estimating the genetic diversity of Pacific salmon and trout using multigene eDNA metabarcoding

scientific article published on 20 February 2021

Evolution at the tips: Asclepias phylogenomics and new perspectives on leaf surfaces

scientific article

Evolutionary relationships among Pinus (Pinaceae) subsections inferred from multiple low-copy nuclear loci

scientific article published on 01 December 2005

Fossil calibration of molecular divergence infers a moderate mutation rate and recent radiations for pinus

scientific article published on 22 September 2006

Fragaria: a genus with deep historical roots and ripe for evolutionary and ecological insights

scientific article

Functional trait divergence and trait plasticity confer polyploid advantage in heterogeneous environments

scientific article published on 27 October 2018

Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing

scholarly article

Genomic resources for the Neotropical tree genus Cedrela (Meliaceae) and its relatives

scientific article published on 18 January 2019

Horizontal transfer of DNA from the mitochondrial to the plastid genome and its subsequent evolution in milkweeds (apocynaceae).

scientific article published on January 2013

Hyb-Seq: Combining target enrichment and genome skimming for plant phylogenomics

scientific article

Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes

scientific article (publication date: 2 December 2009)

Interspecific phylogenetic analysis enhances intraspecific phylogeographical inference: a case study in Pinus lambertiana

scientific article published in September 2007

Intron size and genome size in plants

scientific article published in December 2002

Length and sequence heterogeneity in 5S rDNA of Populus deltoides

scientific article published on 01 December 2002

Low diversity in the mitogenome of sperm whales revealed by next-generation sequencing

scientific article (publication date: 2013)

Microsatellite primers for the Pacific Northwest conifer Callitropsis nootkatensis (Cupressaceae).

scientific article

Microsatellite primers for the Pacific Northwest endemic conifer Chamaecyparis lawsoniana (Cupressaceae)

scientific article published on 19 October 2011

Mitochondrial genome sequences illuminate maternal lineages of conservation concern in a rare carnivore

scientific article (publication date: 20 April 2011)

Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology

scientific article (publication date: November 2008)

Multiplexed microsatellite recovery using massively parallel sequencing

scientific article

Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics.

scientific article

Newly developed primers for complete ycf1 amplification in Pinus (Pinaceae) chloroplasts with possible family-wide utility

scientific article

PCR-mediated recombination in amplification products derived from polyploid cotton

scientific article published on 01 February 2002

PacBio-Based Mitochondrial Genome Assembly of Leucaena trichandra (Leguminosae) and an Intrageneric Assessment of Mitochondrial RNA Editing

scientific article published on 01 September 2018

Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae).

scientific article

Polymorphism and concerted evolution in a tandemly repeated gene family: 5S ribosomal DNA in diploid and allopolyploid cottons

scientific article published in June 1996

Polyploid formation in cotton is not accompanied by rapid genomic changes

scientific article published in June 2001

Preliminary Genomic Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing

scientific article

Rapid diversification of the cotton genus (Gossypium: Malvaceae) revealed by analysis of sixteen nuclear and chloroplast genes

scientific article published on 01 April 2002

Reticulate evolution and incomplete lineage sorting among the ponderosa pines

scientific article

Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae) ⬇️

scientific article published on June 25, 2012

Tangled trios?: Characterizing a hybrid zone in Castilleja (Orobanchaceae).

scientific article published on 6 July 2009

Targeted Capture Sequencing in Whitebark Pine Reveals Range-Wide Demographic and Adaptive Patterns Despite Challenges of a Large, Repetitive Genome

scientific article

Targeted enrichment strategies for next-generation plant biology.

scientific article published on 6 February 2012

The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae

scientific article published on 27 July 2017

The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group

scientific article (publication date: September 1998)

Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles.

scientific article published on 24 July 2017

Transcriptome characterization and polymorphism detection between subspecies of big sagebrush (Artemisia tridentata)

scientific article

Widespread genealogical nonmonophyly in species of Pinus subgenus Strobus

scientific article published in April 2007

eDNA as a tool for identifying freshwater species in sustainable forestry: A critical review and potential future applications

scientific article published on 28 August 2018

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