List of works by Xiaobing Shi

A functional link between the histone demethylase PHF8 and the transcription factor ZNF711 in X-linked mental retardation

scientific article

AF9 YEATS domain links histone acetylation to DOT1L-mediated H3K79 methylation

scientific article

Author Correction: De novo identification of essential protein domains from CRISPR-Cas9 tiling-sgRNA knockout screens

scientific article published on 25 February 2020

BMI1 regulates androgen receptor in prostate cancer independently of the polycomb repressive complex 1.

scientific article

Broad H3K4me3 is associated with increased transcription elongation and enhancer activity at tumor-suppressor genes

scientific article published on 24 August 2015

DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV

scientific article published on May 2013

De novo identification of essential protein domains from CRISPR-Cas9 tiling-sgRNA knockout screens

scientific article published on 04 October 2019

ENL links histone acetylation to oncogenic gene expression in acute myeloid leukaemia.

scientific article published on March 2017

Emerging roles of lysine methylation on non-histone proteins

scientific article published on 31 July 2015

Endopolyphosphatase in Saccharomyces cerevisiae undergoes post-translational activations to produce short-chain polyphosphates.

scientific article

G9a-mediated methylation of ERα links the PHF20/MOF histone acetyltransferase complex to hormonal gene expression.

scientific article published on 10 March 2016

Gas41 links histone acetylation to H2A.Z deposition and maintenance of embryonic stem cell identity.

scientific article

Histone H3K23-specific acetylation by MORF is coupled to H3K14 acylation

scientific article published on 17 October 2019

Histone H3K4 methylation regulates deactivation of the spindle assembly checkpoint through direct binding of Mad2

scientific article published on 19 May 2016

ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression

scientific article

Inorganic polyphosphate in Bacillus cereus: motility, biofilm formation, and sporulation

scholarly article

KIX domain determines a selective tumor-promoting role for EP300 and its vulnerability in small cell lung cancer

scientific article published on 16 February 2022

LSD1 binds to HPV16 E7 and promotes the epithelial-mesenchymal transition in cervical cancer by demethylating histones at the Vimentin promoter

scientific article

Lysine methylation: beyond histones

scientific article published on January 2012

Mechanistic insights into chromatin targeting by leukemic NUP98-PHF23 fusion

scientific article published on 03 July 2020

Modulation of p53 function by SET8-mediated methylation at lysine 382

scientific article

Molecular Coupling of Histone Crotonylation and Active Transcription by AF9 YEATS Domain

scientific article published on April 2016

Molecular insights into the recognition of N-terminal histone modifications by the BRPF1 bromodomain.

scientific article

Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2

scientific article (publication date: 6 July 2006)

Nuclear condensates of p300 formed though the structured catalytic core can act as a storage pool of p300 with reduced HAT activity

scientific article published on 29 July 2021

PHF20 Readers Link Methylation of Histone H3K4 and p53 with H4K16 Acetylation.

scientific article published on October 2016

PHF6 regulates cell cycle progression by suppressing ribosomal RNA synthesis

scientific article published on 10 December 2012

Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation

scientific article

Polyphosphate kinase 1, a conserved bacterial enzyme, in a eukaryote, Dictyostelium discoideum, with a role in cytokinesis

scholarly article

Proteome-wide analysis in Saccharomyces cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36.

scientific article

Recognition of Histone H3K14 Acylation by MORF.

scientific article published on 9 March 2017

Recognition of histone H3K4 trimethylation by the plant homeodomain of PHF2 modulates histone demethylation

scientific article

Recognition of unmethylated histone H3 lysine 4 links BHC80 to LSD1-mediated gene repression

scientific article

Regulation of estrogen receptor α by histone methyltransferase SMYD2-mediated protein methylation

scientific article published on 07 October 2013

Selective binding of the PHD6 finger of MLL4 to histone H4K16ac links MLL4 and MOF

scientific article published on 24 May 2019

Stabilized phosphatidylinositol-5-phosphate analogues as ligands for the nuclear protein ING2: chemistry, biology, and molecular modeling

scientific article

Structural insights into estrogen receptor α methylation by histone methyltransferase SMYD2, a cellular event implicated in estrogen signaling regulation

scientific article

Structural insights into the π-π-π stacking mechanism and DNA-binding activity of the YEATS domain

scientific article published in Nature Communications

TRIM24 links a non-canonical histone signature to breast cancer

scientific article

TRIM24 links glucose metabolism with transformation of human mammary epithelial cells

scientific article

The MBT Repeats of L3MBTL1 Link SET8-mediated p53 Methylation at Lysine 382 to Target Gene Repression ⬇️

scientific article

The Taf14 YEATS domain is a reader of histone crotonylation

scientific article

The Yng1p plant homeodomain finger is a methyl-histone binding module that recognizes lysine 4-methylated histone H3.

scientific article

The ZZ domain of p300 mediates specificity of the adjacent HAT domain for histone H3.

scientific article

The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation

scientific article published in Nature Communications

The fellowships of the INGs

scientific article

The histone-H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers

scientific article published on 9 January 2014

Trans-tail regulation of MLL4-catalyzed H3K4 methylation by H4R3 symmetric dimethylation is mediated by a tandem PHD of MLL4

scientific article

Wnt-Induced Stabilization of KDM4C Is Required for Wnt/β-Catenin Target Gene Expression and Glioblastoma Tumorigenesis

scientific article published on 30 December 2019

YEATS2 is a selective histone crotonylation reader.

scientific article published on 22 April 2016

YEATS2 links histone acetylation to tumorigenesis of non-small cell lung cancer.

scientific article

ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression

scientific article

ZMYND11: an H3.3-specific reader of H3K36me3.

scientific article published on 25 June 2014

ZMYND8 Reads the Dual Histone Mark H3K4me1-H3K14ac to Antagonize the Expression of Metastasis-Linked Genes

scientific journal article

ZZ-dependent regulation of p62/SQSTM1 in autophagy

scientific article published in Nature Communications

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