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List of works by Yutaka Satou

A Boolean Function for Neural Induction Reveals a Critical Role of Direct Intercellular Interactions in Patterning the Ectoderm of the Ascidian Embryo

scientific article

A Maternal System Initiating the Zygotic Developmental Program through Combinatorial Repression in the Ascidian Embryo

scientific article

A Nearly Complete Genome of Ciona intestinalis Type A (C. robusta) Reveals the Contribution of Inversion to Chromosomal Evolution in the Genus Ciona

scientific article published on 01 November 2019

A Twist-like bHLH gene is a downstream factor of an endogenous FGF and determines mesenchymal fate in the ascidian embryos

scientific article published in September 2003

A cDNA resource from the basal chordate Ciona intestinalis

article

A genomewide survey of developmentally relevant genes in Ciona intestinalis

scientific article published on 10 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis

scientific article published on 13 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis. I. Genes for bHLH transcription factors

scientific article published on 8 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis. II. Genes for homeobox transcription factors

scientific article published on 8 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis. III. Genes for Fox, ETS, nuclear receptors and NFkappaB.

scientific article published on 13 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis. IV. Genes for HMG transcriptional regulators, bZip and GATA/Gli/Zic/Snail.

scientific article published on 13 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis. IX. Genes for muscle structural proteins

scientific article published on 10 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis. V. Genes for receptor tyrosine kinase pathway and Notch signaling pathway

scientific article published on 9 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis. VI. Genes for Wnt, TGFbeta, Hedgehog and JAK/STAT signaling pathways.

scientific article published on 9 May 2003

A genomewide survey of developmentally relevant genes in Ciona intestinalis. VII. Molecules involved in the regulation of cell polarity and actin dynamics.

scientific article published on 10 May 2003

A genomic overview of short genetic variations in a basal chordate, Ciona intestinalis

scientific article

A pipeline for the systematic identification of non-redundant full-ORF cDNAs for polymorphic and evolutionary divergent genomes: Application to the ascidian Ciona intestinalis.

scientific article published on 27 May 2015

A saturation screen for cis-acting regulatory DNA in the Hox genes of Ciona intestinalis

scientific article

A single-cell analysis of the molecular lineage of chordate embryogenesis

scientific article published on 04 November 2020

A zinc finger transcription factor, ZicL, is a direct activator of Brachyury in the notochord specification of Ciona intestinalis.

scientific article published on March 2004

ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets.

scientific article

Action of morpholinos in Ciona embryos.

scientific article published in July 2001

An integrated database of the ascidian, Ciona intestinalis: towards functional genomics

scientific article published in August 2005

Analysis of large scale expression sequenced tags (ESTs) from the anural ascidian, Molgula tectiformis

scientific article published on 30 March 2007

Antagonism between β-catenin and Gata.a sequentially segregates the germ layers of ascidian embryos.

scientific article published on 5 October 2016

Ascidian Zic Genes.

scientific article published in January 2018

Ascidian larva reveals ancient origin of vertebrate-skeletal-muscle troponin I characteristics in chordate locomotory muscle.

scientific article published on 29 August 2003

Assembly of polymorphic genomes: algorithms and application to Ciona savignyi

scientific article published on August 2005

Axial patterning in cephalochordates and the evolution of the organizer

scientific article published on 21 January 2007

Blastema induction in aneurogenic state and Prrx-1 regulation by MMPs and FGFs in Ambystoma mexicanum limb regeneration

scientific article published on 22 April 2011

Blood system formation in the urochordate Ciona intestinalis requires the variable receptor vCRL1.

scientific article published on 18 April 2012

Brachyury (T) gene expression and notochord development in Oikopleura longicauda (Appendicularia, Urochordata).

scientific article published in May 2001

CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality

scientific article

Caspases: evolutionary aspects of their functions in vertebrates.

scientific article published on March 2009

Cataloging transcription factor and major signaling molecule genes for functional genomic studies in Ciona intestinalis

scientific article

Characterization of Brachyury-Downstream Notochord Genes in the Ciona intestinalis Embryo

article

Chromosomal mapping of 170 BAC clones in the ascidian Ciona intestinalis

scientific article

Ci-Tbx6b and Ci-Tbx6c are key mediators of the maternal effect gene Ci-macho1 in muscle cell differentiation in Ciona intestinalis embryos

scientific article

Ci-opsin1, a vertebrate-type opsin gene, expressed in the larval ocellus of the ascidian Ciona intestinalis

scientific article

Ciona intestinalis cDNA projects: expressed sequence tag analyses and gene expression profiles during embryogenesis

scientific article published in April 2002

Ciona intestinalis: an emerging model for whole-genome analyses

scientific article

Cis-acting transcriptional repression establishes a sharp boundary in chordate embryos

scientific article

Cloning and characterization of an ascidian homolog of the human 8-oxoguanine DNA glycosylase (Ogg1) that is involved in the repair of 8-oxo-7,8-dihydroguanine in DNA in Ciona intestinalis

scientific article published on 01 April 2006

Comprehensive analysis of the ascidian genome reveals novel insights into the molecular evolution of ion channel genes

scientific article

Conserved function of caspase-8 in apoptosis during bony fish evolution.

scientific article

Construction of BAC libraries derived from the ascidian Ciona intestinalis

scientific article

Construction of a cDNA microarray derived from the ascidian Ciona intestinalis

scientific article published on October 2003

Controlling Cell Fate Specification System by Key Genes Determined from Network Structure

article

Developmental gene activities in ascidian embryos.

scientific article

Differential gene expression along the animal-vegetal axis in the ascidian embryo is maintained by a dual functional protein Foxd

scientific article

Differential gene expression in notochord and nerve cord fate segregation in the Ciona intestinalis embryo

scientific article

Differential temporal control of Foxa.a and Zic-r.b specifies brain versus notochord fate in the ascidian embryo

scientific article

Distinct regulation ofSnailin two muscle lineages of the ascidian embryo achieves temporal coordination of muscle development

article

Dynamics of two key maternal factors that initiate zygotic regulatory programs in ascidian embryos.

scientific article published on 14 March 2018

EST analysis of gene expression in testis of the ascidian Ciona intestinalis

scientific article

Expression cloning of an ascidian syndecan suggests its role in embryonic cell adhesion and morphogenesis

scientific article published in July 1999

Expression of FoxE and FoxQ genes in the endostyle of Ciona intestinalis

article

Expression of hedgehog genes in Ciona intestinalis embryos

scientific article

Expression of neuropeptide- and hormone-encoding genes in the Ciona intestinalis larval brain

scientific article published on 13 January 2011

Fgf genes in the basal chordate Ciona intestinalis

article

Foxg specifies sensory neurons in the anterior neural plate border of the ascidian embryo

scientific article published on 29 October 2019

Further EST analysis of endocrine genes that are preferentially expressed in the neural complex of Ciona intestinalis: receptor and enzyme genes associated with endocrine system in the neural complex

scientific article published on 27 October 2006

Further characterization of genes expressed during Ciona intestinalis metamorphosis

scientific article published in October 2002

Gata is ubiquitously required for the earliest zygotic gene transcription in the ascidian embryo

scientific article published on 18 November 2019

Gene Expression Profiles in Tadpole Larvae of Ciona intestinalis

article

Gene expression profile during the life cycle of the urochordate Ciona intestinalis.

scientific article published on 25 May 2007

Gene expression profiles in Ciona intestinalis cleavage-stage embryos

scientific article published in March 2002

Gene expression profiles in young adult Ciona intestinalis

scientific article

Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: towards a comprehensive understanding of gene networks

scientific article published on 21 July 2004

Gene regulatory networks for the development and evolution of the chordate heart

scientific article published on October 2006

Gene regulatory networks in the early ascidian embryo.

scientific article published on 30 March 2008

Gene regulatory networks underlying the compartmentalization of the Ciona central nervous system.

scientific article

Gene regulatory systems that control gene expression in the Ciona embryo

scientific article

Genetic pathways for differentiation of the peripheral nervous system in ascidians

scientific article

Genomewide surveys of developmentally relevant genes in Ciona intestinalis

article

Genomic overview of mRNA 5'-leader trans-splicing in the ascidian Ciona intestinalis

scientific article

Guidelines for the nomenclature of genetic elements in tunicate genomes

scientific article

Hemocytes of Ciona intestinalis express multiple genes involved in innate immune host defense

article

High-throughput protein expression screening and purification in Escherichia coli

scientific article

High-throughput sequence analysis of Ciona intestinalis SL trans-spliced mRNAs: alternative expression modes and gene function correlates

scientific article

Identification of downstream genes of the ascidian muscle determinant gene Ci-macho1.

scientific article

Identification of transcripts expressed preferentially in hemocytes of Ciona intestinalis that can be used as molecular markers

scientific article published in October 2004

Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations.

scientific article published on 14 October 2008

Initiation of the zygotic genetic program in the ascidian embryo

scientific article published on 10 February 2018

Isolation and characterization of genes that are expressed during Ciona intestinalis metamorphosis

scientific article published in April 2001

Large scale EST analyses in Ciona intestinalis: its application as Northern blot analyses

scientific article

Large-scale characterization of genes specific to the larval nervous system in the ascidian Ciona intestinalis

article

M-Ras evolved independently of R-Ras and its neural function is conserved between mammalian and ascidian, which lacks classical Ras.

scientific article published on 11 October 2008

Microarray analysis of localization of maternal transcripts in eggs and early embryos of the ascidian, Ciona intestinalis

scientific article published in August 2005

Microinjection of Exogenous Nucleic Acids into Eggs: Ciona Species

scientific article published on 01 January 2018

Morpholino-based gene knockdown screen of novel genes with developmental function in Ciona intestinalis

scientific article published on 19 November 2003

Multiple signaling pathways coordinate to induce a threshold response in a chordate embryo

scientific article (publication date: 2013)

Novel Endostyle-Specific Genes in the Ascidian Ciona intestinalis

article

Profiles of maternally expressed genes in fertilized eggs of Ciona intestinalis.

scientific article

Region specific gene expressions in the central nervous system of the ascidian embryo.

scientific article

Regulatory blueprint for a chordate embryo

scientific article

Regulatory genes in the ancestral chordate genomes

scientific article

Retinoic acid affects gene expression and morphogenesis without upregulating the retinoic acid receptor in the ascidian Ciona intestinalis

scientific article published in March 2003

Sustained Heterozygosity Across a Self-Incompatibility Locus in an Inbred Ascidian

scientific article published on 18 September 2014

Systematic analysis of embryonic expression profiles of zinc finger genes in Ciona intestinalis.

scientific article published on 6 March 2006

T-box genes in the ascidian Ciona intestinalis: characterization of cDNAs and spatial expression.

scientific article

Tachykinin and tachykinin receptor of an ascidian, Ciona intestinalis: evolutionary origin of the vertebrate tachykinin family

scientific article

Tfap2 and Sox1/2/3 cooperatively specify ectodermal fates in ascidian embryos.

scientific article

The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program.

scientific article published on 20 July 2010

The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

scientific article

The amphioxus genome and the evolution of the chordate karyotype

scientific article

The amphioxus genome illuminates vertebrate origins and cephalochordate biology

scientific article

The apoptotic initiator caspase-8: its functional ubiquity and genetic diversity during animal evolution.

scientific article published on 8 September 2014

The ascidian Mesp gene specifies heart precursor cells.

scientific article

The evolutionary conservation of the core components necessary for the extrinsic apoptotic signaling pathway, in Medaka fish.

scientific article published in June 2007

The evolutionary origin of animal cellulose synthase.

scientific article

The genetic program to specify ectodermal cells in ascidian embryos

scientific article published on 04 March 2020

The invertebrate ancestry of endocannabinoid signalling: an orthologue of vertebrate cannabinoid receptors in the urochordate Ciona intestinalis

scientific article published in January 2003

The regulatory pathway from genes directly activated by maternal factors to muscle structural genes in ascidian embryos

scientific article published on 04 February 2019

Three distinct lineages of mesenchymal cells in Ciona intestinalis embryos demonstrated by specific gene expression.

scientific article published in October 2004

Transcriptome dynamics in early embryos of the ascidian, Ciona intestinalis

scientific article published on 9 October 2013

macho-1-Related genes in Ciona embryos

scientific article published on 28 February 2002

posterior end mark 2 (pem-2),pem-4,pem-5, andpem-6: Maternal Genes with Localized mRNA in the Ascidian Embryo ⬇️

scientific article published on December 15, 1997

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