List of works - Miika Ahdesmaki

A Predictive Genetic Signature for Response to Fluoropyrimidine-Based Neoadjuvant Chemoradiation in Clinical Stage II and III Rectal Cancer

scientific article published on 25 November 2013

A reliable method for the detection of BRCA1 and BRCA2 mutations in fixed tumour tissue utilising multiplex PCR-based targeted next generation sequencing

scientific article

AZD5153: A Novel Bivalent BET Bromodomain Inhibitor Highly Active against Hematologic Malignancies

scientific article published on 29 August 2016

Altered regulation and expression of genes by BET family of proteins in COPD patients

scientific article

An evaluation of the challenges to developing tumor BRCA1 and BRCA2 testing methodologies for clinical practice

scientific article published on 7 December 2017

Computational methods for estimation of cell cycle phase distributions of yeast cells

scientific article published on January 2007

Detection of Pathogenic Mutation Prone Locations from Protein Sequences using Solvent Accessibility Measurements

Development and Independent Validation of a Prognostic Assay for Stage II Colon Cancer Using Formalin-Fixed Paraffin-Embedded Tissue

scientific article published on 07 November 2011

Disambiguate: An open-source application for disambiguating two species in next generation sequencing data from grafted samples.

scientific article

Feature selection in omics prediction problems using cat scores and false nondiscovery rate control

Model selection for prognostic time-to-event gene signature discovery with applications in early breast cancer data

scientific article

PIM kinase inhibitor AZD1208 for treatment of MYC-driven prostate cancer

scientific article

Prioritisation of structural variant calls in cancer genomes

scientific article

Rational Selection of Syngeneic Preclinical Tumor Models for Immunotherapeutic Drug Discovery

scientific article published on 6 December 2016

Robust Fisher's Test for Periodicity Detection in Noisy Biological Time Series

Robust detection of periodic time series measured from biological systems

scientific article

Robust regression for periodicity detection in non-uniformly sampled time-course gene expression data

scientific article

Simulation of microarray data with realistic characteristics.

scientific article

The calcineurin-NFAT pathway controls activity-dependent circadian gene expression in slow skeletal muscle

scientific article

VarDict: a novel and versatile variant caller for next-generation sequencing in cancer research

scientific article published on 7 April 2016

List of works by Miika Ahdesmaki

A Predictive Genetic Signature for Response to Fluoropyrimidine-Based Neoadjuvant Chemoradiation in Clinical Stage II and III Rectal Cancer

A reliable method for the detection of BRCA1 and BRCA2 mutations in fixed tumour tissue utilising multiplex PCR-based targeted next generation sequencing

AZD5153: A Novel Bivalent BET Bromodomain Inhibitor Highly Active against Hematologic Malignancies

Altered regulation and expression of genes by BET family of proteins in COPD patients

An evaluation of the challenges to developing tumor BRCA1 and BRCA2 testing methodologies for clinical practice

Computational methods for estimation of cell cycle phase distributions of yeast cells

Detection of Pathogenic Mutation Prone Locations from Protein Sequences using Solvent Accessibility Measurements

Development and Independent Validation of a Prognostic Assay for Stage II Colon Cancer Using Formalin-Fixed Paraffin-Embedded Tissue

Disambiguate: An open-source application for disambiguating two species in next generation sequencing data from grafted samples.

Feature selection in omics prediction problems using cat scores and false nondiscovery rate control

Model selection for prognostic time-to-event gene signature discovery with applications in early breast cancer data

PIM kinase inhibitor AZD1208 for treatment of MYC-driven prostate cancer

Prioritisation of structural variant calls in cancer genomes

Rational Selection of Syngeneic Preclinical Tumor Models for Immunotherapeutic Drug Discovery

Robust Fisher's Test for Periodicity Detection in Noisy Biological Time Series

Robust detection of periodic time series measured from biological systems

Robust regression for periodicity detection in non-uniformly sampled time-course gene expression data

Simulation of microarray data with realistic characteristics.

The calcineurin-NFAT pathway controls activity-dependent circadian gene expression in slow skeletal muscle

VarDict: a novel and versatile variant caller for next-generation sequencing in cancer research