List of works - Yvan Moënne-Loccoz

1-Aminocyclopropane-1-carboxylate deaminase producers associated to maize and other Poaceae species.

scientific article

A new DGGE protocol targeting 2,4-diacetylphloroglucinol biosynthetic gene phlD from phylogenetically contrasted biocontrol pseudomonads for assessment of disease-suppressive soils

scientific article published in April 2008

Actinobacterial community dominated by a distinct clade in acidic soil of a waterlogged deciduous forest.

scientific article

Analysis of genes contributing to plant-beneficial functions in Plant Growth-Promoting Rhizobacteria and related Proteobacteria

scientific article published on 2 September 2014

Ancient wheat varieties have a higher ability to interact with plant growth-promoting rhizobacteria

scientific article published on 21 October 2019

Anthropization level of Lascaux Cave microbiome shown by regional-scale comparisons of pristine and anthropized caves

scientific article published on 24 July 2019

Bacterial, archaeal and micro-eukaryotic communities characterize a disease-suppressive or conducive soil and a cultivar resistant or susceptible to common scab

scientific article published on 16 October 2019

Cell culturability of Pseudomonas protegens CHA0 depends on soil pH

scientific article published on 14 November 2013

Co-occurrence of rhizobacteria with nitrogen fixation and/or 1-aminocyclopropane-1-carboxylate deamination abilities in the maize rhizosphere

scientific article published on 10 April 2020

Comparison of <i>Actinobacteria</i> communities from human‐impacted and pristine karst caves

scientific article published in 2022

Comparison of ATPase-encoding type III secretion system hrcN genes in biocontrol fluorescent Pseudomonads and in phytopathogenic proteobacteria

scientific article published on September 2004

Comparison of barley succession and take-all disease as environmental factors shaping the rhizobacterial community during take-all decline

scientific article

Comparison of prominent Azospirillum strains in Azospirillum-Pseudomonas-Glomus consortia for promotion of maize growth

scientific article published on 18 July 2012

Comparison of rhizobacterial community composition in soil suppressive or conducive to tobacco black root rot disease

scientific article

Comparison of sandy soils suppressive or conducive to ectoparasitic nematode damage on sugarcane

scientific article

Construction of a recA mutant of Azospirillum lipoferum and involvement of recA in phase variation

scientific article published in July 2004

Control of the Cooperation Between Plant Growth-Promoting Rhizobacteria and Crops by Rhizosphere Signals

article

Cosmopolitan distribution of phlD-containing dicotyledonous crop-associated biocontrol pseudomonads of worldwide origin

Dark-zone alterations expand throughout Paleolithic Lascaux Cave despite spatial heterogeneity of the cave microbiome

scientific article published in 2023

Development and validation of a prototype 16S rRNA-based taxonomic microarray for Alphaproteobacteria

scientific article

Development of a 16S rRNA gene-based prototype microarray for the detection of selected actinomycetes genera.

scientific article

Development of a 16S rRNA microarray approach for the monitoring of rhizosphere Pseudomonas populations associated with the decline of take-all disease of wheat

article

Development of bacterial community during spontaneous succession on spoil heaps after brown coal mining

scientific article

Distribution of 2,4-Diacetylphloroglucinol Biosynthetic Genes among the Pseudomonas spp. Reveals Unexpected Polyphyletism.

scientific article

Draft Genome Sequence of Plant Growth-Promoting Bacillus altitudinis Strain PAE4

scientific article published on 04 October 2018

Duplication of plasmid-borne nitrite reductase gene nirK in the wheat-associated plant growth-promoting rhizobacterium Azospirillum brasilense Sp245.

scientific article

Effect of Clay Mineralogy on Iron Bioavailability and Rhizosphere Transcription of 2,4-Diacetylphloroglucinol Biosynthetic Genes in Biocontrol Pseudomonas protegens

article

Effect of long-term vineyard monoculture on rhizosphere populations of pseudomonads carrying the antimicrobial biosynthetic genes phlD and/or hcnAB.

scientific article

Effect of stress on the ability of a phlA-based quantitative competitive PCR assay to monitor biocontrol strain Pseudomonas fluorescens CHA0

scientific article published in January 2003

Effects of Azospirillum brasilense with genetically modified auxin biosynthesis gene ipdC upon the diversity of the indigenous microbiota of the wheat rhizosphere

scientific article

Environmental mycobacteria closely related to the pathogenic species evidenced in an acidic forest wetland

Evaluation of rhizobacterial indicators of tobacco black root rot suppressiveness in farmers' fields.

scientific article

Evolutionary history of synthesis pathway genes for phloroglucinol and cyanide antimicrobials in plant-associated fluorescent pseudomonads.

scientific article published on 8 March 2012

Exploitation of genetically modified inoculants for industrial ecology applications.

scientific article

Expression on roots and contribution to maize phytostimulation of 1-aminocyclopropane-1-decarboxylate deaminase gene acdS in Pseudomonas fluorescens F113

article

Fluorescent Pseudomonas Strains with only Few Plant-Beneficial Properties Are Favored in the Maize Rhizosphere.

scientific article published on 25 August 2016

Frequent, independent transfers of a catabolic gene from bacteria to contrasted filamentous eukaryotes.

scientific article

Genetic diversity and biocontrol potential of fluorescent pseudomonads producing phloroglucinols and hydrogen cyanide from Swiss soils naturally suppressive or conducive to Thielaviopsis basicola-mediated black root rot of tobacco

scientific article published in March 2006

Genomic, phylogenetic and catabolic re-assessment of the Pseudomonas putida clade supports the delineation of Pseudomonas alloputida sp. nov., Pseudomonas inefficax sp. nov., Pseudomonas persica sp. nov., and Pseudomonas shirazica sp. nov

scientific article published on 02 May 2019

Horizontal Acquisition of Prokaryotic Genes for Eukaryote Functioning and Niche Adaptation

article

Host plant secondary metabolite profiling shows a complex, strain-dependent response of maize to plant growth-promoting rhizobacteria of the genus Azospirillum

article

Impact of inoculation with the phytostimulatory PGPR Azospirillum lipoferum CRT1 on the genetic structure of the rhizobacterial community of field-grown maize

Inactivation of the regulatory gene algU or gacA can affect the ability of biocontrol Pseudomonas fluorescens CHA0 to persist as culturable cells in nonsterile soil

scientific article published on April 2002

Is diversification history of maize influencing selection of soil bacteria by roots?

scientific article published on 29 November 2011

Is plant evolutionary history impacting recruitment of diazotrophs and nifH expression in the rhizosphere?

scientific article

Is the ability of biocontrol fluorescent pseudomonads to produce the antifungal metabolite 2,4-diacetylphloroglucinol really synonymous with higher plant protection?

scientific article published on 01 January 2007

Let the Core Microbiota Be Functional.

scientific article

Microbial ecology of tourist Paleolithic caves

scientific article published in 2022

Molecular characterization and PCR detection of a nitrogen-fixing Pseudomonas strain promoting rice growth

Multilocus sequence analysis of biocontrol fluorescent Pseudomonas spp. producing the antifungal compound 2,4-diacetylphloroglucinol

scientific article published on 01 August 2007

Persistence and cell culturability of biocontrol strain Pseudomonas fluorescens CHA0 under plough pan conditions in soil and influence of the anaerobic regulator gene anr

scientific article published on 01 February 2003

Persistence of culturable Escherichia coli fecal contaminants in dairy alpine grassland soils

scientific article published on 23 October 2008

Phase variation and genomic architecture changes in Azospirillum.

scientific article published on August 2006

Phylogenetic diversity and antagonistic traits of root and rhizosphere pseudomonads of a bean from Iran for controlling Rhizoctonia solani.

scientific article published on 26 August 2017

Phylogeny of HCN synthase-encoding hcnBC genes in biocontrol fluorescent pseudomonads and its relationship with host plant species and HCN synthesis ability

scientific article

Phylogeny of the 1-aminocyclopropane-1-carboxylic acid deaminase-encoding gene acdS in phytobeneficial and pathogenic Proteobacteria and relation with strain biogeography

scientific article published in June 2006

Physical organization and phylogenetic analysis of acdR as leucine-responsive regulator of the 1-aminocyclopropane-1-carboxylate deaminase gene acdS in phytobeneficial Azospirillum lipoferum 4B and other Proteobacteria.

scientific article published on 9 April 2008

Physical organization of phytobeneficial genes nifH and ipdC in the plant growth-promoting rhizobacterium Azospirillum lipoferum 4VI.

scientific article

Plant growth-promoting rhizobacteria and root system functioning

scientific article published on 17 September 2013

Potential of a 16S rRNA-based taxonomic microarray for analyzing the rhizosphere effects of maize on Agrobacterium spp. and bacterial communities

scientific article

Prevalence of fluorescent pseudomonads producing antifungal phloroglucinols and/or hydrogen cyanide in soils naturally suppressive or conducive to tobacco black root rot.

scientific article published in May 2003

Prevalence of type III secretion system in effective biocontrol pseudomonads

scientific article published on 12 April 2014

Promoter-trap identification of wheat seed extract-induced genes in the plant-growth-promoting rhizobacterium Azospirillum brasilense Sp245.

scientific article

Pseudomonas protegens sp. nov., widespread plant-protecting bacteria producing the biocontrol compounds 2,4-diacetylphloroglucinol and pyoluteorin

scientific article

Rhizosphere ecology and phytoprotection in soils naturally suppressive to Thielaviopsis black root rot of tobacco.

scientific article published on 17 April 2014

Rock substrate rather than black stain alterations drives microbial community structure in the passage of Lascaux Cave

scientific article published on 05 December 2018

Root microbiome relates to plant host evolution in maize and other Poaceae

scientific article

The Pseudomonas secondary metabolite 2,4-diacetylphloroglucinol is a signal inducing rhizoplane expression of Azospirillum genes involved in plant-growth promotion

scientific article published in February 2011

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

article by Jos M. Raaijmakers et al published 23 February 2008 in Plant and Soil

The role of the antimicrobial compound 2,4-diacetylphloroglucinol in the impact of biocontrol Pseudomonas fluorescens F113 on Azospirillum brasilense phytostimulators

scientific article published on 27 January 2011

The type III secretion system of biocontrol Pseudomonas fluorescens KD targets the phytopathogenic Chromista Pythium ultimum and promotes cucumber protection

scientific article published on 01 September 2005

Unexpected phytostimulatory behavior for Escherichia coli and Agrobacterium tumefaciens model strains

scientific article published in May 2013

Variation of secondary metabolite levels in maize seedling roots induced by inoculation with Azospirillum, Pseudomonas and Glomus consortium under field conditions

article

List of works by Yvan Moënne-Loccoz

1-Aminocyclopropane-1-carboxylate deaminase producers associated to maize and other Poaceae species.

A new DGGE protocol targeting 2,4-diacetylphloroglucinol biosynthetic gene phlD from phylogenetically contrasted biocontrol pseudomonads for assessment of disease-suppressive soils

Actinobacterial community dominated by a distinct clade in acidic soil of a waterlogged deciduous forest.

Analysis of genes contributing to plant-beneficial functions in Plant Growth-Promoting Rhizobacteria and related Proteobacteria

Ancient wheat varieties have a higher ability to interact with plant growth-promoting rhizobacteria

Anthropization level of Lascaux Cave microbiome shown by regional-scale comparisons of pristine and anthropized caves

Bacterial, archaeal and micro-eukaryotic communities characterize a disease-suppressive or conducive soil and a cultivar resistant or susceptible to common scab

Cell culturability of Pseudomonas protegens CHA0 depends on soil pH

Co-occurrence of rhizobacteria with nitrogen fixation and/or 1-aminocyclopropane-1-carboxylate deamination abilities in the maize rhizosphere

Comparison of <i>Actinobacteria</i> communities from human‐impacted and pristine karst caves

Comparison of ATPase-encoding type III secretion system hrcN genes in biocontrol fluorescent Pseudomonads and in phytopathogenic proteobacteria

Comparison of barley succession and take-all disease as environmental factors shaping the rhizobacterial community during take-all decline

Comparison of prominent Azospirillum strains in Azospirillum-Pseudomonas-Glomus consortia for promotion of maize growth

Comparison of rhizobacterial community composition in soil suppressive or conducive to tobacco black root rot disease

Comparison of sandy soils suppressive or conducive to ectoparasitic nematode damage on sugarcane

Construction of a recA mutant of Azospirillum lipoferum and involvement of recA in phase variation

Control of the Cooperation Between Plant Growth-Promoting Rhizobacteria and Crops by Rhizosphere Signals

Cosmopolitan distribution of phlD-containing dicotyledonous crop-associated biocontrol pseudomonads of worldwide origin

Dark-zone alterations expand throughout Paleolithic Lascaux Cave despite spatial heterogeneity of the cave microbiome

Development and validation of a prototype 16S rRNA-based taxonomic microarray for Alphaproteobacteria

Development of a 16S rRNA gene-based prototype microarray for the detection of selected actinomycetes genera.

Development of a 16S rRNA microarray approach for the monitoring of rhizosphere Pseudomonas populations associated with the decline of take-all disease of wheat

Development of bacterial community during spontaneous succession on spoil heaps after brown coal mining

Distribution of 2,4-Diacetylphloroglucinol Biosynthetic Genes among the Pseudomonas spp. Reveals Unexpected Polyphyletism.

Draft Genome Sequence of Plant Growth-Promoting Bacillus altitudinis Strain PAE4

Duplication of plasmid-borne nitrite reductase gene nirK in the wheat-associated plant growth-promoting rhizobacterium Azospirillum brasilense Sp245.

Effect of Clay Mineralogy on Iron Bioavailability and Rhizosphere Transcription of 2,4-Diacetylphloroglucinol Biosynthetic Genes in Biocontrol Pseudomonas protegens

Effect of long-term vineyard monoculture on rhizosphere populations of pseudomonads carrying the antimicrobial biosynthetic genes phlD and/or hcnAB.

Effect of stress on the ability of a phlA-based quantitative competitive PCR assay to monitor biocontrol strain Pseudomonas fluorescens CHA0

Effects of Azospirillum brasilense with genetically modified auxin biosynthesis gene ipdC upon the diversity of the indigenous microbiota of the wheat rhizosphere

Environmental mycobacteria closely related to the pathogenic species evidenced in an acidic forest wetland

Evaluation of rhizobacterial indicators of tobacco black root rot suppressiveness in farmers' fields.

Evolutionary history of synthesis pathway genes for phloroglucinol and cyanide antimicrobials in plant-associated fluorescent pseudomonads.

Exploitation of genetically modified inoculants for industrial ecology applications.

Expression on roots and contribution to maize phytostimulation of 1-aminocyclopropane-1-decarboxylate deaminase gene acdS in Pseudomonas fluorescens F113

Fluorescent Pseudomonas Strains with only Few Plant-Beneficial Properties Are Favored in the Maize Rhizosphere.

Frequent, independent transfers of a catabolic gene from bacteria to contrasted filamentous eukaryotes.

Genetic diversity and biocontrol potential of fluorescent pseudomonads producing phloroglucinols and hydrogen cyanide from Swiss soils naturally suppressive or conducive to Thielaviopsis basicola-mediated black root rot of tobacco

Genomic, phylogenetic and catabolic re-assessment of the Pseudomonas putida clade supports the delineation of Pseudomonas alloputida sp. nov., Pseudomonas inefficax sp. nov., Pseudomonas persica sp. nov., and Pseudomonas shirazica sp. nov

Horizontal Acquisition of Prokaryotic Genes for Eukaryote Functioning and Niche Adaptation

Host plant secondary metabolite profiling shows a complex, strain-dependent response of maize to plant growth-promoting rhizobacteria of the genus Azospirillum

Impact of inoculation with the phytostimulatory PGPR Azospirillum lipoferum CRT1 on the genetic structure of the rhizobacterial community of field-grown maize

Inactivation of the regulatory gene algU or gacA can affect the ability of biocontrol Pseudomonas fluorescens CHA0 to persist as culturable cells in nonsterile soil

Is diversification history of maize influencing selection of soil bacteria by roots?

Is plant evolutionary history impacting recruitment of diazotrophs and nifH expression in the rhizosphere?

Is the ability of biocontrol fluorescent pseudomonads to produce the antifungal metabolite 2,4-diacetylphloroglucinol really synonymous with higher plant protection?

Let the Core Microbiota Be Functional.

Microbial ecology of tourist Paleolithic caves

Molecular characterization and PCR detection of a nitrogen-fixing Pseudomonas strain promoting rice growth

Multilocus sequence analysis of biocontrol fluorescent Pseudomonas spp. producing the antifungal compound 2,4-diacetylphloroglucinol

Persistence and cell culturability of biocontrol strain Pseudomonas fluorescens CHA0 under plough pan conditions in soil and influence of the anaerobic regulator gene anr

Persistence of culturable Escherichia coli fecal contaminants in dairy alpine grassland soils

Phase variation and genomic architecture changes in Azospirillum.

Phylogenetic diversity and antagonistic traits of root and rhizosphere pseudomonads of a bean from Iran for controlling Rhizoctonia solani.

Phylogeny of HCN synthase-encoding hcnBC genes in biocontrol fluorescent pseudomonads and its relationship with host plant species and HCN synthesis ability

Phylogeny of the 1-aminocyclopropane-1-carboxylic acid deaminase-encoding gene acdS in phytobeneficial and pathogenic Proteobacteria and relation with strain biogeography

Physical organization and phylogenetic analysis of acdR as leucine-responsive regulator of the 1-aminocyclopropane-1-carboxylate deaminase gene acdS in phytobeneficial Azospirillum lipoferum 4B and other Proteobacteria.

Physical organization of phytobeneficial genes nifH and ipdC in the plant growth-promoting rhizobacterium Azospirillum lipoferum 4VI.

Plant growth-promoting rhizobacteria and root system functioning

Potential of a 16S rRNA-based taxonomic microarray for analyzing the rhizosphere effects of maize on Agrobacterium spp. and bacterial communities

Prevalence of fluorescent pseudomonads producing antifungal phloroglucinols and/or hydrogen cyanide in soils naturally suppressive or conducive to tobacco black root rot.

Prevalence of type III secretion system in effective biocontrol pseudomonads

Promoter-trap identification of wheat seed extract-induced genes in the plant-growth-promoting rhizobacterium Azospirillum brasilense Sp245.

Pseudomonas protegens sp. nov., widespread plant-protecting bacteria producing the biocontrol compounds 2,4-diacetylphloroglucinol and pyoluteorin

Rhizosphere ecology and phytoprotection in soils naturally suppressive to Thielaviopsis black root rot of tobacco.

Rock substrate rather than black stain alterations drives microbial community structure in the passage of Lascaux Cave

Root microbiome relates to plant host evolution in maize and other Poaceae

The Pseudomonas secondary metabolite 2,4-diacetylphloroglucinol is a signal inducing rhizoplane expression of Azospirillum genes involved in plant-growth promotion

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

The role of the antimicrobial compound 2,4-diacetylphloroglucinol in the impact of biocontrol Pseudomonas fluorescens F113 on Azospirillum brasilense phytostimulators

The type III secretion system of biocontrol Pseudomonas fluorescens KD targets the phytopathogenic Chromista Pythium ultimum and promotes cucumber protection

Unexpected phytostimulatory behavior for Escherichia coli and Agrobacterium tumefaciens model strains

Variation of secondary metabolite levels in maize seedling roots induced by inoculation with Azospirillum, Pseudomonas and Glomus consortium under field conditions