List of works - Edi Prifti

A reference gene catalogue of the pig gut microbiome

scientific article published on 19 September 2016

Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology

scientific article

Alterations of the human gut microbiome in liver cirrhosis

scientific article

An integrated catalog of reference genes in the human gut microbiome

scientific article

Author Correction: Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology

scientific article published on 21 December 2020

Capturing the most wanted taxa through cross-sample correlations

scientific article published on 04 March 2016

Corrigendum: Dietary intervention impact on gut microbial gene richness

scientific article published in Nature

Deep learning analysis of electrocardiogram for risk prediction of drug-induced arrhythmias and diagnosis of long QT syndrome

scientific article

Deep learning methods in metagenomics: a review

scientific article published on 17 April 2024

Dietary intervention impact on gut microbial gene richness

scientific article

Dietary modulation of the gut microbiota--a randomised controlled trial in obese postmenopausal women

scientific article

Differential effects of macronutrient content in 2 energy-restricted diets on cardiovascular risk factors and adipose tissue cell size in moderately obese individuals: a randomized controlled trial

scientific article published on 14 December 2011

Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

scientific article published on 2 December 2015

Effect of genome and environment on metabolic and inflammatory profiles

scientific article

Efficient global network learning from local reconstructions

From correlation to causality: the case of <i>Subdoligranulum</i>

scientific article published on 01 November 2020

FunNet: an integrative tool for exploring transcriptional interactions

scientific article published in 2008

Gut Microbiota Profile of Obese Diabetic Women Submitted to Roux-en-Y Gastric Bypass and Its Association with Food Intake and Postoperative Diabetes Remission

scientific article published on 21 January 2020

Human gut microbes impact host serum metabolome and insulin sensitivity

scientific article

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

scientific article published on 6 July 2014

Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology

scientific article published on 18 November 2020

Increased Basement Membrane Components in Adipose Tissue During Obesity: Links With TGFβ and Metabolic Phenotypes.

scientific article

Interactional and functional centrality in transcriptional co-expression networks

scientific article published on 19 October 2010

Interpretable and accurate prediction models for metagenomics data

Macrophage gene expression in adipose tissue is associated with insulin sensitivity and serum lipid levels independent of obesity.

scientific article published on 13 June 2013

Microbiome and metabolome features of the cardiometabolic disease spectrum

scientific article published on 17 February 2022

Qin et al. reply

scientific article published in September 2015

Richness of human gut microbiome correlates with metabolic markers

scientific article (publication date: 29 August 2013)

Serum lipidomics reveals early differential effects of gastric bypass compared with banding on phospholipids and sphingolipids independent of differences in weight loss.

scientific article

Specific gut microbiota features and metabolic markers in postmenopausal women with obesity

scientific article published on 15 June 2015

Spectral consensus strategy for accurate reconstruction of large biological networks

scientific article

Statin therapy is associated with lower prevalence of gut microbiota dysbiosis

scientific article published on 06 May 2020

Structural and inflammatory heterogeneity in subcutaneous adipose tissue: relation with liver histopathology in morbid obesity

scientific article

Towards a Deep Learning-Powered Herbarium Image Analysis Platform

scientific article published in 2024

List of works by Edi Prifti

A reference gene catalogue of the pig gut microbiome

Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology

Alterations of the human gut microbiome in liver cirrhosis

An integrated catalog of reference genes in the human gut microbiome

Author Correction: Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology

Capturing the most wanted taxa through cross-sample correlations

Corrigendum: Dietary intervention impact on gut microbial gene richness

Deep learning analysis of electrocardiogram for risk prediction of drug-induced arrhythmias and diagnosis of long QT syndrome

Deep learning methods in metagenomics: a review

Dietary intervention impact on gut microbial gene richness

Dietary modulation of the gut microbiota--a randomised controlled trial in obese postmenopausal women

Differential effects of macronutrient content in 2 energy-restricted diets on cardiovascular risk factors and adipose tissue cell size in moderately obese individuals: a randomized controlled trial

Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

Effect of genome and environment on metabolic and inflammatory profiles

Efficient global network learning from local reconstructions

From correlation to causality: the case of <i>Subdoligranulum</i>

FunNet: an integrative tool for exploring transcriptional interactions

Gut Microbiota Profile of Obese Diabetic Women Submitted to Roux-en-Y Gastric Bypass and Its Association with Food Intake and Postoperative Diabetes Remission

Human gut microbes impact host serum metabolome and insulin sensitivity

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology

Increased Basement Membrane Components in Adipose Tissue During Obesity: Links With TGFβ and Metabolic Phenotypes.

Interactional and functional centrality in transcriptional co-expression networks

Interpretable and accurate prediction models for metagenomics data

Macrophage gene expression in adipose tissue is associated with insulin sensitivity and serum lipid levels independent of obesity.

Microbiome and metabolome features of the cardiometabolic disease spectrum

Qin et al. reply

Richness of human gut microbiome correlates with metabolic markers

Serum lipidomics reveals early differential effects of gastric bypass compared with banding on phospholipids and sphingolipids independent of differences in weight loss.

Specific gut microbiota features and metabolic markers in postmenopausal women with obesity

Spectral consensus strategy for accurate reconstruction of large biological networks

Statin therapy is associated with lower prevalence of gut microbiota dysbiosis

Structural and inflammatory heterogeneity in subcutaneous adipose tissue: relation with liver histopathology in morbid obesity

Towards a Deep Learning-Powered Herbarium Image Analysis Platform