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List of works by Sebastian Deorowicz

Author Correction: FQSqueezer: k-mer-based compression of sequencing data

scientific article published on 21 February 2020

CoMSA: compression of protein multiple sequence alignment files

scientific article published on 01 January 2019

CoMeta: classification of metagenomes using k-mers

scientific article published on 17 April 2015

Comment on: 'ERGC: an efficient referential genome compression algorithm'.

scientific article published on 28 November 2015

Compression of DNA sequence reads in FASTQ format.

scientific article published on 19 January 2011

Correction: Indexes of Large Genome Collections on a PC.

scientific article published on 8 May 2015

DSRC 2--Industry-oriented compression of FASTQ files.

scientific article

Data compression for sequencing data

scientific article

Disk-based compression of data from genome sequencing

scientific article

Disk-based k-mer counting on a PC.

scientific article

Environmental metagenome classification for constructing a microbiome fingerprint

scientific article published on 13 November 2019

FAMSA: Fast and accurate multiple sequence alignment of huge protein families ⬇️

scientific article published on 27 September 2016

FQSqueezer: k-mer-based compression of sequencing data

scientific article published on 17 January 2020

FaStore - a space-saving solution for raw sequencing data.

scientific article

GDC 2: Compression of large collections of genomes ⬇️

scientific article published on 25 June 2015

GTC: how to maintain huge genotype collections in a compressed form.

scientific article published on 16 January 2018

GTShark: genotype compression in large projects

scientific article published on 01 November 2019

Genome compression: a novel approach for large collections.

scientific article published on 21 August 2013

Indexes of large genome collections on a PC. ⬇️

scientific article

Indexing Arbitrary-Length k-Mers in Sequencing Reads. ⬇️

scientific article published on 16 July 2015

Inter-population Differences in Retrogene Loss and Expression in Humans.

scientific article published on 16 October 2015

KMC 2: fast and resource-frugal k-mer counting ⬇️

scientific article

KMC 3: counting and manipulating k -mer statistics.

scientific article published on 4 May 2017

Kmer-db: instant evolutionary distance estimation

scientific article published on 01 January 2019

QuickProbs 2: Towards rapid construction of high-quality alignments of large protein families. ⬇️

scientific article published on 31 January 2017

QuickProbs--a fast multiple sequence alignment algorithm designed for graphics processors

scientific article

RECKONER: read error corrector based on KMC. ⬇️

scientific article published on 5 January 2017

Robust relative compression of genomes with random access ⬇️

scientific article published on September 5, 2011

Whisper: Read sorting allows robust mapping of DNA sequencing data

scientific article published on 01 June 2019

miRNEST database: an integrative approach in microRNA search and annotation

scientific article

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