List of works by Blagoy Blagoev

A draft genome sequence of the elusive giant squid, Architeuthis dux

scientific article published on 01 January 2020

A mass spectrometry–friendly database for cSNP identification

scholarly article by Søren Schandorff et al published June 2007 in Nature Methods

A proteomic approach for identification of secreted proteins during the differentiation of 3T3-L1 preadipocytes to adipocytes.

scientific article published on March 2002

A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling

scientific article

A rapid screening method to monitor expression of recombinant proteins from various prokaryotic and eukaryotic expression systems using matrix-assisted laser desorption ionization-time-of-flight mass spectrometry

scientific article

Actin homolog MreB and RNA polymerase interact and are both required for chromosome segregation in Escherichia coli

scientific article

Adipose MDM2 regulates systemic insulin sensitivity

Agonism and antagonism at the insulin receptor

scientific article

Analysis of receptor signaling pathways by mass spectrometry: identification of vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors

scientific article

Analysis of secreted proteins using SILAC.

scientific article

Cellular Proteome Dynamics during Differentiation of Human Primary Myoblasts.

scientific article published on 29 June 2015

Changes in Gab2 phosphorylation and interaction partners in response to interleukin (IL)-2 stimulation in T-lymphocytes

scientific article published on 30 March 2016

Characterization of Receptor-Associated Protein Complex Assembly in Interleukin (IL)-2- and IL-15-Activated T-Cell Lines.

scientific article published on 27 July 2016

Characterization of ubiquitination dependent dynamics in growth factor receptor signaling by quantitative proteomics

scientific article published on 28 September 2011

Cloning of MASK, a novel member of the mammalian germinal center kinase III subfamily, with apoptosis-inducing properties

scientific article

Common pitfalls in bioinformatics-based analyses: look before you leap

scientific article published on 01 September 2001

Cylindromatosis Tumor Suppressor Protein (CYLD) Deubiquitinase is Necessary for Proper Ubiquitination and Degradation of the Epidermal Growth Factor Receptor.

scientific article published on June 2017

Data on interleukin (IL)-2- and IL-15-dependent changes in IL-2Rβ and IL-2Rγ complexes

scientific article

Data on mass spectrometry-based proteomics for studying the involvement of CYLD in the ubiquitination events downstream of EGFR activation.

scientific article published on 25 April 2018

Deubiquitinating enzymes and the proteasome regulate preferential sets of ubiquitin substrates

scientific article published on 18 May 2022

Dissection of the insulin signaling pathway via quantitative phosphoproteomics

scholarly article

Dynamics of the skeletal muscle secretome during myoblast differentiation

scientific article

Functional proteomics defines the molecular switch underlying FGF receptor trafficking and cellular outputs.

scientific article

Fundamental constraints in synchronous muscle limit superfast motor control in vertebrates.

scientific article published on 22 November 2017

GABAB receptor constituents revealed by tandem affinity purification from transgenic mice

scientific article published on 20 April 2010

GProX, a user-friendly platform for bioinformatics analysis and visualization of quantitative proteomics data

scientific article

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

scientific article

Human Proteinpedia enables sharing of human protein data

scientific article

Identification of a novel immunoreceptor tyrosine-based activation motif-containing molecule, STAM2, by mass spectrometry and its involvement in growth factor and cytokine receptor signaling pathways

scientific article (publication date: 8 December 2000)

Inactivation of effector caspases through nondegradative polyubiquitylation

scientific article

Inhibition of adipocyte differentiation by resistin-like molecule alpha. Biochemical characterization of its oligomeric nature

scientific article

Interleukin-2 signaling pathway analysis by quantitative phosphoproteomics

scientific article published on 23 June 2011

JMJD1C demethylates MDC1 to regulate the RNF8 and BRCA1-mediated chromatin response to DNA breaks

scientific article published on 17 November 2013

MDM2 facilitates adipocyte differentiation through CRTC-mediated activation of STAT3

scientific article published on 30 June 2016

MSQuant, an open source platform for mass spectrometry-based quantitative proteomics

scientific article published on January 2010

Mapping Protein–Protein Interactions by Quantitative Proteomics

scientific article published on January 1, 2010

Mdm2 controls CREB-dependent transactivation and initiation of adipocyte differentiation.

scientific article

Mechanism of divergent growth factor effects in mesenchymal stem cell differentiation

scientific article

Microarrays go live--new prospects for proteomics

scientific article published on 01 November 2001

Multi-omics characterization of a diet-induced obese model of non-alcoholic steatohepatitis

scientific article published on 24 January 2020

Multilayered proteomics reveals molecular switches dictating ligand-dependent EGFR trafficking

scientific article published on 2 May 2016

Nuclear Phosphoproteomic Screen Uncovers ACLY as Mediator of IL-2-induced Proliferation of CD4+ T lymphocytes.

scientific article published on 11 April 2016

PPARγ ligand production is tightly linked to clonal expansion during initiation of adipocyte differentiation

scientific article published on 13 October 2014

PTP1B targets the endosomal sorting machinery: dephosphorylation of regulatory sites on the endosomal sorting complex required for transport component STAM2.

scientific article published on 26 May 2010

Phosphoproteomic and Functional Analyses Reveal Sperm-specific Protein Changes Downstream of Kappa Opioid Receptor in Human Spermatozoa

scientific article published on 08 January 2019

Phosphoproteomic profiling reveals a defined genetic program for osteoblastic lineage commitment of human bone marrow-derived stromal stem cells

scientific article published on 12 December 2019

Phosphorylation site dynamics of early T-cell receptor signaling

scientific article

Proteome-wide quantitation by SILAC.

scientific article published on January 2010

Quantitative analysis of HGF and EGF-dependent phosphotyrosine signaling networks

scientific article published on May 2010

Quantitative phosphoproteomics to characterize signaling networks

scientific article published on 05 June 2012

Quantitative proteomic assessment of very early cellular signaling events

Quantitative proteomics to study mitogen-activated protein kinases

scientific article published on November 2006

Receptor tyrosine kinase signaling: a view from quantitative proteomics

scientific article

Regulation of epidermal growth factor receptor trafficking by lysine deacetylase HDAC6

scientific article

Regulation of ubiquitin-binding proteins by monoubiquitination

scientific article

S -nitrosylation of the Mitochondrial Chaperone TRAP1 Sensitizes Hepatocellular Carcinoma Cells to Inhibitors of Succinate Dehydrogenase

article published in 2016

SILAC-Based Temporal Phosphoproteomics

SILAC-based quantification of changes in protein tyrosine phosphorylation induced by Interleukin-2 (IL-2) and IL-15 in T-lymphocytes

scientific article published on 22 August 2015

Separate developmental programs for HLA-A and -B cell surface expression during differentiation from embryonic stem cells to lymphocytes, adipocytes and osteoblasts

scientific article

Signal transduction by growth factor receptors: signaling in an instant

scientific article published on 20 September 2007

Simultaneous dissection and comparison of IL-2 and IL-15 signaling pathways by global quantitative phosphoproteomics

scientific article published on 30 September 2014

Specificity in Toll-like receptor signalling through distinct effector functions of TRAF3 and TRAF6

scientific journal article

StUbEx PLUS-A Modified Stable Tagged Ubiquitin Exchange System for Peptide Level Purification and In-Depth Mapping of Ubiquitination Sites

scientific article published in November 2017

StUbEx: Stable tagged ubiquitin exchange system for the global investigation of cellular ubiquitination

scientific article

Stable isotope labeling by amino acids in cell culture (SILAC) and quantitative comparison of the membrane proteomes of self-renewing and differentiating human embryonic stem cells

scientific article published on 17 January 2009

Stable isotope labelling with amino acids in cell culture for human embryonic stem cell proteomic analysis

scientific article published on 01 January 2012

System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation

scientific article published on 15 March 2011

Systematic in vivo RNAi analysis identifies IAPs as NEDD8-E3 ligases

scientific article published in December 2010

Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics

scientific article

The chromatin scaffold protein SAFB1 renders chromatin permissive for DNA damage signaling

scientific article published on 19 September 2013

The glucocorticoid receptor associates with the cohesin loader NIPBL to promote long-range gene regulation

scientific article published on 30 March 2022

The multifunctional role of SPANX-A/D protein subfamily in the promotion of pro-tumoural processes in human melanoma

scientific article published on 11 February 2021

Time-Resolved Systems Medicine Reveals Viral Infection-Modulating Host Targets

scientific article published on 28 March 2019

UbiSite approach for comprehensive mapping of lysine and N-terminal ubiquitination sites

scientific article published on 02 July 2018

p53 regulates expression of uncoupling protein 1 through binding and repression of PPARγ coactivator-1α.

scientific article published on 17 November 2015