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List of works by Pablo Minguez

A function-centric approach to the biological interpretation of microarray time-series

scientific article published in January 2006

A global map of associations between types of protein posttranslational modifications and human genetic diseases

scientific article published on 30 July 2021

A major role of TWEAK/Fn14 axis as a therapeutic target for post-angioplasty restenosis

scientific article published on 05 August 2019

An evaluation of pipelines for DNA variant detection can guide a reanalysis protocol to increase the diagnostic ratio of genetic diseases

scientific article published on 27 January 2022

Annotation of the M. tuberculosis hypothetical orfeome: adding functional information to more than half of the uncharacterized proteins

scientific article

Assessing the biological significance of gene expression signatures and co-expression modules by studying their network properties

scientific article

Asthma diagnosis using integrated analysis of eosinophil microRNAs

scientific article published on 11 October 2018

Autocrine CCL5 effect mediates trastuzumab resistance by ERK pathway activation in HER2-positive breast cancer

scientific article published on 13 May 2020

BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments.

scientific article

BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments.

scientific article published on July 2006

Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments

scientific article published on 31 May 2008

Bioinformatics Analysis of Functional Associations of PTMs.

scientific article published in January 2017

CSVS, a crowdsourcing database of the Spanish population genetic variability

scientific article published on 29 September 2020

Colon cancer modulation by a diabetic environment: A single institutional experience

scientific article

Combining targeted panel-based resequencing and copy-number variation analysis for the diagnosis of inherited syndromic retinopathies and associated ciliopathies.

scientific article published on 27 March 2018

Controlled ovarian stimulation induces a functional genomic delay of the endometrium with potential clinical implications

scientific article

Deciphering a global network of functionally associated post-translational modifications

scientific article

Diabetes-mediated promotion of colon mucosa carcinogenesis is associated with mitochondrial dysfunction

scientific article published on 27 July 2019

Enhanced anti-inflammatory effects of mesenchymal stromal cells mediated by the transient ectopic expression of CXCR4 and IL10

scientific article published on 12 February 2021

FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments

scientific article

From genes to functional classes in the study of biological systems

scientific article

Functional genomics and networks: new approaches in the extraction of complex gene modules

scientific article published on February 2010

Functional profiling of microarray experiments using text-mining derived bioentities

scientific article published on 13 September 2007

GEPAS, a web-based tool for microarray data analysis and interpretation

scientific article

GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data

scientific article

Gene set internal coherence in the context of functional profiling

scientific article

MicroRNA-31 Emerges as a Predictive Biomarker of Pathological Response and Outcome in Locally Advanced Rectal Cancer

scientific article published on 3 June 2016

Molecular evidence of field cancerization initiated by diabetes in colon cancer patients

scientific article published on 16 February 2019

Next station in microarray data analysis: GEPAS.

scientific article

OGEE: an online gene essentiality database

scientific article published on 10 November 2011

Operon structure and cotranslational subunit association direct protein assembly in bacteria.

scientific article published on 24 September 2015

P-041IKAROS: a potential prognostic marker in pancreatic ductal adenocarcinoma.

scientific article

PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins

scientific article published on 31 October 2014

PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins

scientific article

Prioritizing Molecular Biomarkers in Asthma and Respiratory Allergy Using Systems Biology

scientific article published on 15 April 2021

SARS-CoV-2 Mutant Spectra at Different Depth Levels Reveal an Overwhelming Abundance of Low Frequency Mutations

scientific article published on 8 June 2022

SARS-CoV-2 Point Mutation and Deletion Spectra and Their Association with Different Disease Outcomes

scientific article published on 29 March 2022

STRING v9.1: protein-protein interaction networks, with increased coverage and integration

scientific article (publication date: 2013)

Selection upon genome architecture: conservation of functional neighborhoods with changing genes

scientific article

Systematic identification of phosphorylation-mediated protein interaction switches

scientific article

The Hippo Pathway Transducers YAP1/TEAD Induce Acquired Resistance to Trastuzumab in HER2-Positive Breast Cancer

scientific article published on 29 April 2020

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

scientific article

Toward the Mutational Landscape of Autosomal Dominant Retinitis Pigmentosa: A Comprehensive Analysis of 258 Spanish Families

article

Understanding disease mechanisms with models of signaling pathway activities.

scientific article

Unravelling the pathogenic role and genotype-phenotype correlation of the USH2A p.(Cys759Phe) variant among Spanish families.

scientific article published on 18 June 2018

Urine Haptoglobin and Haptoglobin-Related Protein Predict Response to Spironolactone in Patients With Resistant Hypertension

scientific article published on 01 April 2019

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