List of works - Andreas H. Farnleitner

A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters.

scientific article published on 25 May 2017

A novel triplex quantitative PCR strategy for quantification of toxigenic and nontoxigenic Vibrio cholerae in aquatic environments

scientific article

A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area

scientific article

A sensitive and robust method for automated on-line monitoring of enzymatic activities in water and water resources

scientific article

Acid phosphatase test proves superior to standard phenotypic identification procedure for Clostridium perfringens strains isolated from water

scientific article published on 18 August 2011

Antibiotic Resistance Patterns of Pseudomonas spp. Isolated from the River Danube.

scientific article

Applicability of solid-phase cytometry and epifluorescence microscopy for rapid assessment of the microbiological quality of dialysis water.

scientific article

Application of single-strand conformation polymorphism and denaturing gradient gel electrophoresis for fla sequence typing of Campylobacter jejuni

scientific article published on 01 March 2003

Attachment and Detachment Behavior of Human Adenovirus and Surrogates in Fine Granular Limestone Aquifer Material

scientific article published on September 2015

Automated Sampling Procedures Supported by High Persistence of Bacterial Fecal Indicators and Bacteroidetes Genetic Microbial Source Tracking Markers in Municipal Wastewater during Short-Term Storage at 5°C

scientific article published on 22 May 2015

Bacterial diversity along a 2600 km river continuum

scientific article published on 29 April 2015

Bacterial dynamics in spring water of alpine karst aquifers indicates the presence of stable autochthonous microbial endokarst communities.

scientific article published in August 2005

Biotin- and Glycoprotein-Coated Microspheres as Surrogates for Studying Filtration Removal of Cryptosporidium parvum in a Granular Limestone Aquifer Medium

scientific article published on 17 April 2015

Comparison of PCR and quantitative real-time PCR methods for the characterization of ruminant and cattle fecal pollution sources.

scientific article published on 5 July 2013

Detection of the 35S promoter in transgenic maize via various isothermal amplification techniques: a practical approach.

scientific article published in June 2014

Detection of the food allergen celery via loop-mediated isothermal amplification technique.

scientific article published in June 2014

Determination of Escherichia coli contamination with chromocult coliform agar showed a high level of discrimination efficiency for differing fecal pollution levels in tropical waters of Kampala, Uganda.

scientific article

Determination of the sources of nitrate and the microbiological sources of pollution in the Sava River Basin.

scientific article published on 10 August 2016

Development and evaluation of a self-cleaning custom-built auto sampler controlled by a low-cost RaspberryPi microcomputer for online enzymatic activity measurements.

scientific article published on 12 October 2016

Development of a Scorpion probe-based real-time PCR for the sensitive quantification of Bacteroides sp. ribosomal DNA from human and cattle origin and evaluation in spring water matrices.

scientific article published on 30 May 2006

Development of a new CARD-FISH protocol for quantification of Legionella pneumophila and its application in two hospital cooling towers.

scientific article

Development of a novel amplified fragment length polymorphism (AFLP) typing method for enterococci isolates from cattle faeces and evaluation of the single versus pooled faecal sampling approach.

scientific article published on 7 July 2006

Development of the bacterial compartment along the Danube River: a continuum despite local influences

scientific article published on 16 November 2010

Discrimination efficacy of fecal pollution detection in different aquatic habitats of a high-altitude tropical country, using presumptive coliforms, Escherichia coli, and Clostridium perfringens spores.

scientific article published on January 2005

Dynamics of Vibrio cholerae abundance in Austrian saline lakes, assessed with quantitative solid-phase cytometry

scientific article published on 02 April 2015

Dynamics of natural prokaryotes, viruses, and heterotrophic nanoflagellates in alpine karstic groundwater

scientific article

Enterobacteriaceae Isolated from the River Danube: Antibiotic Resistances, with a Focus on the Presence of ESBL and Carbapenemases

scientific article

Enterococcus and Escherichia coli fecal source apportionment with microbial source tracking genetic markers--is it feasible?

scientific article published on 11 July 2013

Enumerating Microorganism Surrogates for Groundwater Transport Studies Using Solid-Phase Cytometry.

scientific article published on 03 January 2014

Escherichia coli and enterococci are sensitive and reliable indicators for human, livestock and wildlife faecal pollution in alpine mountainous water resources.

scientific article

Eubacterial 16S-rDNA amplicon profiling: a rapid technique for comparison and differentiation of heterotrophic plate count communities from drinking water.

scientific article published in May 2004

Evaluation of Genotoxic Pressure along the Sava River

scientific article

Extremely productive microbial communities in shallow saline pools respond immediately to changing meteorological conditions

scientific article published in September 2002

Factors controlling extremely productive heterotrophic bacterial communities in shallow soda pools.

scientific article published on 13 May 2003

Global Distribution of Human-Associated Fecal Genetic Markers in Reference Samples from Six Continents

scientific article published on 23 March 2018

Growth response of soda lake bacterial communities to simulated rainfall

scientific article published on 06 July 2007

Holy springs and holy water: underestimated sources of illness?

scientific article

Hydrolysis of 4-methylumbelliferyl-beta-D-glucuronide in differing sample fractions of river waters and its implication for the detection of fecal pollution

scientific article published in February 2002

Integral strategy for evaluation of fecal indicator performance in bird-influenced saline inland waters.

scientific article published on December 2004

Microbiological monitoring and automated event sampling at karst springs using LEO-satellites.

scientific article published on January 2008

Microbiological water quality along the Danube River: integrating data from two whole-river surveys and a transnational monitoring network.

scientific article published on 29 May 2009

Occurrence of human-associated Bacteroidetes genetic source tracking markers in raw and treated wastewater of municipal and domestic origin and comparison to standard and alternative indicators of faecal pollution

scientific article

Performance characteristics of qPCR assays targeting human- and ruminant-associated bacteroidetes for microbial source tracking across sixteen countries on six continents.

scientific article published on 10 July 2013

Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study

scientific article published on 5 July 2013

Potential applications of next generation DNA sequencing of 16S rRNA gene amplicons in microbial water quality monitoring.

scientific article published on November 2015

Primers containing universal bases reduce multiple amoA gene specific DGGE band patterns when analysing the diversity of beta-ammonia oxidizers in the environment

scientific article

Prokaryotic community analysis with CARD-FISH in comparison with FISH in ultra-oligotrophic ground- and drinking water.

scientific article published on October 2007

QMRAcatch: Human-Associated Fecal Pollution and Infection Risk Modeling for a River/Floodplain Environment

scientific article published on July 2016

QMRAcatch: Microbial Quality Simulation of Water Resources including Infection Risk Assessment

scientific article published on September 2015

Quantification of Fusarium graminearum in infected wheat by species specific real-time PCR applying a TaqMan Probe

scientific article

Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions.

scientific article published on August 2006

Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics.

scientific article published on 28 June 2008

Rapid and sensitive quantification of Vibrio cholerae and Vibrio mimicus cells in water samples by use of catalyzed reporter deposition fluorescence in situ hybridization combined with solid-phase cytometry

scientific article published on 10 August 2012

Rapid enzymatic detection of Escherichia coli contamination in polluted river water

scientific article

Rapid growth of planktonic Vibrio cholerae non-O1/non-O139 strains in a large alkaline lake in Austria: dependence on temperature and dissolved organic carbon quality.

scientific article published on February 2008

Real-time monitoring of beta-d-glucuronidase activity in sediment laden streams: A comparison of prototypes

scientific article published on 27 May 2016

Response to letter to the editor regarding "detection of the 35S promoter in transgenic maize via various isothermal amplification techniques: a practical approach".

scientific article published on 30 October 2014

Sanitary inspection of wells using risk-of-contamination scoring indicates a high predictive ability for bacterial faecal pollution in the peri-urban tropical lowlands of Dar es Salaam, Tanzania

scientific article published on June 2012

Setback distances between small biological wastewater treatment systems and drinking water wells against virus contamination in alluvial aquifers.

scientific article published on 25 August 2016

Specific detection of Fusarium langsethiae and related species by DGGE and ARMS-PCR of a beta-tubulin (tub1) gene fragment.

scientific article published in September 2004

The Hydrological Open Air Laboratory (HOAL) in Petzenkirchen: a hypothesis-driven observatory

The development of a multiplex real-time PCR to quantify Fusarium DNA of trichothecene and fumonisin producing strains in maize

article

The spectral absorption coefficient at 254 nm as a real-time early warning proxy for detecting faecal pollution events at alpine karst water resources ⬇️

scientific article published on January 1, 2010

Use of faecal pollution indicators to estimate pathogen die off conditions in source separated faeces in Kathmandu Valley, Nepal

scientific article published in March 2009

List of works by Andreas H. Farnleitner

A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters.

A novel triplex quantitative PCR strategy for quantification of toxigenic and nontoxigenic Vibrio cholerae in aquatic environments

A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area

A sensitive and robust method for automated on-line monitoring of enzymatic activities in water and water resources

Acid phosphatase test proves superior to standard phenotypic identification procedure for Clostridium perfringens strains isolated from water

Antibiotic Resistance Patterns of Pseudomonas spp. Isolated from the River Danube.

Applicability of solid-phase cytometry and epifluorescence microscopy for rapid assessment of the microbiological quality of dialysis water.

Application of single-strand conformation polymorphism and denaturing gradient gel electrophoresis for fla sequence typing of Campylobacter jejuni

Attachment and Detachment Behavior of Human Adenovirus and Surrogates in Fine Granular Limestone Aquifer Material

Automated Sampling Procedures Supported by High Persistence of Bacterial Fecal Indicators and Bacteroidetes Genetic Microbial Source Tracking Markers in Municipal Wastewater during Short-Term Storage at 5°C

Bacterial diversity along a 2600 km river continuum

Bacterial dynamics in spring water of alpine karst aquifers indicates the presence of stable autochthonous microbial endokarst communities.

Biotin- and Glycoprotein-Coated Microspheres as Surrogates for Studying Filtration Removal of Cryptosporidium parvum in a Granular Limestone Aquifer Medium

Comparison of PCR and quantitative real-time PCR methods for the characterization of ruminant and cattle fecal pollution sources.

Detection of the 35S promoter in transgenic maize via various isothermal amplification techniques: a practical approach.

Detection of the food allergen celery via loop-mediated isothermal amplification technique.

Determination of Escherichia coli contamination with chromocult coliform agar showed a high level of discrimination efficiency for differing fecal pollution levels in tropical waters of Kampala, Uganda.

Determination of the sources of nitrate and the microbiological sources of pollution in the Sava River Basin.

Development and evaluation of a self-cleaning custom-built auto sampler controlled by a low-cost RaspberryPi microcomputer for online enzymatic activity measurements.

Development of a Scorpion probe-based real-time PCR for the sensitive quantification of Bacteroides sp. ribosomal DNA from human and cattle origin and evaluation in spring water matrices.

Development of a new CARD-FISH protocol for quantification of Legionella pneumophila and its application in two hospital cooling towers.

Development of a novel amplified fragment length polymorphism (AFLP) typing method for enterococci isolates from cattle faeces and evaluation of the single versus pooled faecal sampling approach.

Development of the bacterial compartment along the Danube River: a continuum despite local influences

Discrimination efficacy of fecal pollution detection in different aquatic habitats of a high-altitude tropical country, using presumptive coliforms, Escherichia coli, and Clostridium perfringens spores.

Dynamics of Vibrio cholerae abundance in Austrian saline lakes, assessed with quantitative solid-phase cytometry

Dynamics of natural prokaryotes, viruses, and heterotrophic nanoflagellates in alpine karstic groundwater

Enterobacteriaceae Isolated from the River Danube: Antibiotic Resistances, with a Focus on the Presence of ESBL and Carbapenemases

Enterococcus and Escherichia coli fecal source apportionment with microbial source tracking genetic markers--is it feasible?

Enumerating Microorganism Surrogates for Groundwater Transport Studies Using Solid-Phase Cytometry.

Escherichia coli and enterococci are sensitive and reliable indicators for human, livestock and wildlife faecal pollution in alpine mountainous water resources.

Eubacterial 16S-rDNA amplicon profiling: a rapid technique for comparison and differentiation of heterotrophic plate count communities from drinking water.

Evaluation of Genotoxic Pressure along the Sava River

Extremely productive microbial communities in shallow saline pools respond immediately to changing meteorological conditions

Factors controlling extremely productive heterotrophic bacterial communities in shallow soda pools.

Global Distribution of Human-Associated Fecal Genetic Markers in Reference Samples from Six Continents

Growth response of soda lake bacterial communities to simulated rainfall

Holy springs and holy water: underestimated sources of illness?

Hydrolysis of 4-methylumbelliferyl-beta-D-glucuronide in differing sample fractions of river waters and its implication for the detection of fecal pollution

Integral strategy for evaluation of fecal indicator performance in bird-influenced saline inland waters.

Microbiological monitoring and automated event sampling at karst springs using LEO-satellites.

Microbiological water quality along the Danube River: integrating data from two whole-river surveys and a transnational monitoring network.

Occurrence of human-associated Bacteroidetes genetic source tracking markers in raw and treated wastewater of municipal and domestic origin and comparison to standard and alternative indicators of faecal pollution

Performance characteristics of qPCR assays targeting human- and ruminant-associated bacteroidetes for microbial source tracking across sixteen countries on six continents.

Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study

Potential applications of next generation DNA sequencing of 16S rRNA gene amplicons in microbial water quality monitoring.

Primers containing universal bases reduce multiple amoA gene specific DGGE band patterns when analysing the diversity of beta-ammonia oxidizers in the environment

Prokaryotic community analysis with CARD-FISH in comparison with FISH in ultra-oligotrophic ground- and drinking water.

QMRAcatch: Human-Associated Fecal Pollution and Infection Risk Modeling for a River/Floodplain Environment

QMRAcatch: Microbial Quality Simulation of Water Resources including Infection Risk Assessment

Quantification of Fusarium graminearum in infected wheat by species specific real-time PCR applying a TaqMan Probe

Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions.

Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics.

Rapid and sensitive quantification of Vibrio cholerae and Vibrio mimicus cells in water samples by use of catalyzed reporter deposition fluorescence in situ hybridization combined with solid-phase cytometry

Rapid enzymatic detection of Escherichia coli contamination in polluted river water

Rapid growth of planktonic Vibrio cholerae non-O1/non-O139 strains in a large alkaline lake in Austria: dependence on temperature and dissolved organic carbon quality.

Real-time monitoring of beta-d-glucuronidase activity in sediment laden streams: A comparison of prototypes

Response to letter to the editor regarding "detection of the 35S promoter in transgenic maize via various isothermal amplification techniques: a practical approach".

Sanitary inspection of wells using risk-of-contamination scoring indicates a high predictive ability for bacterial faecal pollution in the peri-urban tropical lowlands of Dar es Salaam, Tanzania

Setback distances between small biological wastewater treatment systems and drinking water wells against virus contamination in alluvial aquifers.

Specific detection of Fusarium langsethiae and related species by DGGE and ARMS-PCR of a beta-tubulin (tub1) gene fragment.

The Hydrological Open Air Laboratory (HOAL) in Petzenkirchen: a hypothesis-driven observatory

The development of a multiplex real-time PCR to quantify Fusarium DNA of trichothecene and fumonisin producing strains in maize

The spectral absorption coefficient at 254 nm as a real-time early warning proxy for detecting faecal pollution events at alpine karst water resources ⬇️

Use of faecal pollution indicators to estimate pathogen die off conditions in source separated faeces in Kathmandu Valley, Nepal