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List of works by Ramu Anandakrishnan

A Partition Function Approximation Using Elementary Symmetric Functions ⬇️

scientific article published on December 12, 2012

Abundance of ethnically biased microsatellites in human gene regions

scientific article published on 12 December 2019

An N log N approximation based on the natural organization of biomolecules for speeding up the computation of long range interactions

scientific article published on March 2010

An n log n Generalized Born Approximation

scientific article

Analysis of basic clustering algorithms for numerical estimation of statistical averages in biomolecules

scientific article

Application of machine learning method in genomics and proteomics

scientific article published on 19 April 2015

Author Correction: Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations

scientific article published on 09 December 2019

Biophysical comparison of ATP synthesis mechanisms shows a kinetic advantage for the rotary process.

scientific article published on 19 September 2016

Biophysical comparison of ATP-driven proton pumping mechanisms suggests a kinetic advantage for the rotary process depending on coupling ratio

scientific article

Building Water Models: A Different Approach ⬇️

scientific article published on 16 October 2014

CAGm: a repository of germline microsatellite variations in the 1000 genomes project

scientific article published on 01 January 2019

Crossing complexity of space-filling curves reveals entanglement of S-phase DNA

scientific article published on 31 August 2020

Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations

scientific article published in Scientific Reports

Estimating the number of genetic mutations (hits) required for carcinogenesis based on the distribution of somatic mutations

article

Functional bias in molecular evolution rate of Arabidopsis thaliana

scientific article

H++ 3.0: automating pK prediction and the preparation of biomolecular structures for atomistic molecular modeling and simulations

scientific article

Identifying multi-hit carcinogenic gene combinations: Scaling up a weighted set cover algorithm using compressed binary matrix representation on a GPU

scientific article published on 06 February 2020

Implicit Solvent Model for Million-Atom Atomistic Simulations: Insights into the Organization of 30-nm Chromatin Fiber

scientific article published on 17 October 2016

Modulation of nucleosomal DNA accessibility via charge-altering post-translational modifications in histone core

scientific article published on 16 March 2018

Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions ⬇️

scientific article published on July 4, 2013

Speed of conformational change: comparing explicit and implicit solvent molecular dynamics simulations

scientific article

ZDHHC3 as a Risk and Mortality Marker for Breast Cancer in African American Women

scientific article published on 13 December 2017

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