Search filters

List of works by Marian Walhout

A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity.

scientific article published on September 2008

A Caenorhabditis elegans Genome-Scale Metabolic Network Model

scientific article

A Delicate Balance between Bacterial Iron and Reactive Oxygen Species Supports Optimal C. elegans Development

scientific article published on 20 August 2019

A Persistence Detector for Metabolic Network Rewiring in an Animal

A compendium of Caenorhabditis elegans RNA binding proteins predicts extensive regulation at multiple levels

scientific article published on February 2013

A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks ⬇️

scientific article published on 30 December 2005

A first version of the Caenorhabditis elegans Promoterome

scientific article published on October 2004

A gateway-compatible yeast one-hybrid system.

scientific article

A gene-centered C. elegans protein-DNA interaction network

scientific article

A model of elegance

scientific article published in October 1998

A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors

scientific article

A regulatory cascade of three transcription factors in a single specific neuron, DVC, in Caenorhabditis elegans.

scientific article

A stele-enriched gene regulatory network in the Arabidopsis root

scientific article

Bacterial Metabolism Affects the C. elegans Response to Cancer Chemotherapeutics.

scientific article

C. elegans 14-3-3 proteins regulate life span and interact with SIR-2.1 and DAF-16/FOXO.

scientific article published on 24 July 2006

C. elegans methionine/S-adenosylmethionine cycle activity is sensed and adjusted by a nuclear hormone receptor

scientific article published on 05 October 2020

Caenorhabditis elegans metabolic gene regulatory networks govern the cellular economy

scientific article

Chromatin immunoprecipitation (ChIP) coupled to detection by quantitative real-time PCR to study transcription factor binding to DNA in Caenorhabditis elegans.

scientific article published on January 2008

Chromosome-biased binding and gene regulation by the Caenorhabditis elegans DRM complex

scientific article (publication date: May 2011)

Colony Lift Colorimetric Assay for β-Galactosidase Activity

scientific article

Complex expression dynamics and robustness in C. elegans insulin networks

scientific article published on 28 March 2013

Determination and inference of eukaryotic transcription factor sequence specificity

scientific article

Diet-induced developmental acceleration independent of TOR and insulin in C. elegans

scientific article

EDGEdb: a transcription factor-DNA interaction database for the analysis of C. elegans differential gene expression.

scientific article

Enhanced Y1H assays for Arabidopsis.

scientific article published on 30 October 2011

Enhanced yeast one-hybrid assays for high-throughput gene-centered regulatory network mapping.

scientific article published on 30 October 2011

Erratum: Evidence for dynamically organized modularity in the yeast protein–protein interaction network

scientific article published in Nature

Evolved bacterial resistance against fluoropyrimidines can lower chemotherapy impact in the Caenorhabditis elegans host

scientific article published on 30 November 2020

Functional conservation of a developmental switch in mammals since the Jurassic age

article

Functional modularity of nuclear hormone receptors in a Caenorhabditis elegans metabolic gene regulatory network

scientific article

Gateway Recombinational Cloning

scientific article published on 2 January 2018

Gateway-Compatible Yeast One-Hybrid and Two-Hybrid Assays

scientific article published on 02 July 2018

Gateway-compatible yeast one-hybrid screens

scientific article published on 01 October 2006

Gene regulatory networks and the role of robustness and stochasticity in the control of gene expression

scientific article

Gene-Centered Yeast One-Hybrid Assays

scientific article

Gene-centered regulatory network mapping

scientific article

Gene-centered regulatory networks.

scientific article

Gene-centered yeast one-hybrid assays.

scientific article published in January 2012

Generating Bait Strains for Yeast One-Hybrid Assays

scientific article

Generating Yeast One-Hybrid DNA-Bait Strains

scientific article published on 02 July 2018

Generating Yeast Two-Hybrid Bait Strains

scientific article published on 02 July 2018

Generating an Open Reading Frame (ORF) Entry Clone and Destination Clone

scientific article published on 2 January 2018

Genetic adaptation to diet preserves longevity

scientific article published on February 2014

Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity

scientific article published on 3 November 2008

Genomics in 2011: challenges and opportunities

scientific article published on 28 December 2011

Getting an edge on human disease

scientific article published on 3 November 2009

High-Efficiency Yeast Transformation

scientific article published on 02 July 2018

Human gene-centered transcription factor networks for enhancers and disease variants

scientific article published on April 2015

Identification of critical domains and putative partners for the Caenorhabditis elegans spindle component LIN-5.

scientific article published on 12 May 2004

Identifying Interactors from an Activation Domain Prey Library

scientific article published on 02 July 2018

If two deletions don't stop growth, try three

scientific article published on 01 April 2018

Insight into transcription factor gene duplication from Caenorhabditis elegans Promoterome-driven expression patterns.

scientific article published on 23 January 2007

Integrated version of reverse two-hybrid system for the postproteomic era

scientific article published on 01 January 2002

Integrating 'omic' information: a bridge between genomics and systems biology

scientific article published on October 2003

Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline

scientific article

Integration of metabolic and gene regulatory networks modulates the C. elegans dietary response

scientific article published on March 2013

Interspecies Systems Biology Uncovers Metabolites Affecting C. elegans Gene Expression and Life History Traits

scientific article published on 13 March 2014

Interspecies systems biology uncovers metabolites affecting C. elegans gene expression and life history traits

scientific article

MEX-3 interacting proteins link cell polarity to asymmetric gene expression in Caenorhabditis elegans

scientific article published in February 2002

Many transcription factors contribute to C. elegans growth and fat storage

scientific article published on 08 August 2017

Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities.

scientific article published on 23 April 2015

Marian Walhout: transcriptional mapmaker. Interviewed by Ben Short

scientific article published on July 2009

Matrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping

scientific article

Modeling tissue-relevant Caenorhabditis elegans metabolism at network, pathway, reaction, and metabolite levels

scientific article published on 01 October 2020

Multiple transcription factors directly regulate Hox gene lin-39 expression in ventral hypodermal cells of the C. elegans embryo and larva, including the hypodermal fate regulators LIN-26 and ELT-6.

scientific article

Networking at the second Interactome Meeting

scientific article published on 01 October 2006

PRIMA: a gene-centered, RNA-to-protein method for mapping RNA-protein interactions

scientific article published on 28 February 2017

Performing Yeast One-Hybrid Library Screens

scientific article

Propagating Gateway Vectors

scientific article published on 2 January 2018

Protein interaction maps for model organisms

scientific article

RNA Interference in Caenorhabditis elegans.

scientific article

The C. elegans Snail homolog CES-1 can activate gene expression in vivo and share targets with bHLH transcription factors

scientific article published on 16 April 2009

The FLYWCH transcription factors FLH-1, FLH-2, and FLH-3 repress embryonic expression of microRNA genes in C. elegans

scientific article

The Oxidative Stress Response Requires the NHR-49 Transcription Factor

article

The Oxidative Stress Response in Caenorhabditis elegans Requires the GATA Transcription Factor ELT-3 and SKN-1/Nrf2.

scientific article

The interplay between transcription factors and microRNAs in genome-scale regulatory networks

scientific article

Transcription factor binding to Caenorhabditis elegans first introns reveals lack of redundancy with gene promoters.

scientific article published on 24 September 2013

Transcription factor functionality and transcription regulatory networks

scientific article published on 21 February 2008

Transcription factor modularity in a gene-centered C. elegans core neuronal protein-DNA interaction network

scientific article published on 18 May 2007

Understanding Metabolic Regulation at a Systems Level: Metabolite Sensing, Mathematical Predictions, and Model Organisms.

scientific article

Unraveling transcription regulatory networks by protein-DNA and protein-protein interaction mapping.

scientific article published on 19 October 2006

Using Multisite LR Cloning to Generate a Destination Clone

scientific article published on 2 January 2018

Using a structural and logics systems approach to infer bHLH-DNA binding specificity determinants

scientific article

Using networks to measure similarity between genes: association index selection

scientific article published on December 2013

What does biologically meaningful mean? A perspective on gene regulatory network validation ⬇️

scientific article published on April 11, 2011

Widespread macromolecular interaction perturbations in human genetic disorders

scientific journal article

WormCat: An Online Tool for Annotation and Visualization of Caenorhabditis elegans Genome-Scale Data

scientific article published on 06 December 2019

WormPaths: <i>Caenorhabditis elegans</i> metabolic pathway annotation and visualization

scientific article published on 23 December 2020

Worms, bacteria, and micronutrients: an elegant model of our diet

scientific article

Yeast one-hybrid assays for gene-centered human gene regulatory network mapping.

scientific article published on 30 October 2011

Zymolyase-Treatment and Polymerase Chain Reaction Amplification from Genomic and Plasmid Templates from Yeast

scientific article

lin-8, which antagonizes Caenorhabditis elegans Ras-mediated vulval induction, encodes a novel nuclear protein that interacts with the LIN-35 Rb protein

scientific article

Paulina is supported by:

About Paulina

Help