List of works - Elizabeth Yuriev

'HELPA': a rapid means of student evaluation of lecturing performance in higher education

5,5′-(Piperazine-1,4-diyl)bis(8-chloropyrido[2,3-b][1,5]benzoxazepine)

8-Chloro-5-(4-phenethylpiperazin-1--yl)pyrido[2,3-b][1,5]benzoxazepine

scientific article published on 6 September 2008

A computational approach for exploring carbohydrate recognition by lectins in innate immunity

scientific article published on 28 June 2011

A double mutation of MBP83–99 peptide induces IL-4 responses and antagonizes IFN-γ responses

article

A glycopeptide in complex with MHC class I uses the GalNAc residue as an anchor

scientific article

Adopting an active learning approach to teaching in a research-intensive higher education context transformed staff teaching attitudes and behaviours

Altered peptide ligands of myelin basic protein ( MBP87-99 ) conjugated to reduced mannan modulate immune responses in mice

article

Antibody recognition of aberrant glycosylation on the surface of cancer cells

scientific article published on 4 November 2016

Antibody recognition of cancer-related gangliosides and their mimics investigated using in silico site mapping

scientific article

Antibody-Carbohydrate Recognition from Docked Ensembles Using the AutoMap Procedure

scientific article published on January 2015

Antibody–ligand docking: insights into peptide–carbohydrate mimicry

AutoMap: a tool for analyzing protein-ligand recognition using multiple ligand binding modes.

scientific article published on 8 January 2013

Carbohydrate residues downstream of the terminal Galalpha(1,3)Gal epitope modulate the specificity of xenoreactive antibodies.

scientific article published on 28 August 2007

Carbohydrate-mimetic peptides: structural aspects of mimicry and therapeutic implications.

scientific article published on February 2011

Carbohydrates in Cyberspace

scientific article published on 10 June 2015

Challenges and advances in computational docking: 2009 in review

scientific article published on 23 October 2010

Challenges and advances in structure-based virtual screening

scientific article published in January 2014

Characterization of the N-Methyltransferase Activities of the Multifunctional Polypeptide Cyclosporin Synthetase

scientific article published on 01 April 2011

Computational Approaches for Studying Carbohydrate-Lectin Interactions in Infection

Conformational Analysis of Drug Molecules: A Practical Exercise in the Medicinal Chemistry Course

Crossword puzzles for chemistry education: learning goals beyond vocabulary

Detection and Prevention of Aggregation-based False Positives in STD-NMR-based Fragment Screening

article

Editorial: Structural and Computational Glycobiology - Immunity and Infection.

scientific article

Flipped Classroom Implementation: A Case Report of Two Higher Education Institutions in the United States and Australia

article

Free Ig light chains interact with sphingomyelin and are found on the surface of myeloma plasma cells in an aggregated form

scientific article

Gas phase supramolecular cluster ions of deoxyguanosine induced by binding to (2,2':6'2''-terpyridine)-platinum(II) and (diethylenetriamine)-platinum(II).

scientific article published on 19 January 2009

Gas-phase formation and reactions of radical cations of guanosine, deoxyguanosine and their homodimers and heterodimers

article published in 2011

Geometric forms of 8-chloro-11-[4-(8-chloro-5H-dibenzo[b,e][1,4]diazepin-11-yl)piperazin-1-yl]-5H-dibenzo[b,e][1,4]diazepine–acetone–pentane (2/1/1)

Homobivalent ligands of the atypical antipsychotic clozapine: design, synthesis, and pharmacological evaluation.

scientific article published on 2 February 2012

Homology Modeling and Docking Evaluation of Human Muscarinic Acetylcholine Receptors

Homology modeling and docking evaluation of aminergic G protein-coupled receptors

scientific article published in April 2010

Homology modeling of human muscarinic acetylcholine receptors

scientific article

Identification of preferred carbohydrate binding modes in xenoreactive antibodies by combining conformational filters and binding site maps

scientific article published on 22 February 2010

Improvements, trends, and new ideas in molecular docking: 2012-2013 in review.

scientific article published on 21 March 2015

In silico analysis of antibody-carbohydrate interactions and its application to xenoreactive antibodies

scientific article published on 14 October 2009

Investigation of structure-activity relationships in a series of glibenclamide analogues.

scientific article published in October 2004

Latest developments in molecular docking: 2010-2011 in review

scientific article published on May 2013

Ligand Binding Pathways of Clozapine and Haloperidol in the Dopamine D2 and D3 Receptors.

scientific article published on 2 February 2016

Mannosylation of mutated MBP83-99 peptides diverts immune responses from Th1 to Th2.

scientific article published on 9 June 2008

Mcg light chain dimer as a model system for ligand design: a docking study

article

Molecular Characterisation of the Haemagglutinin Glycan-Binding Specificity of Egg-Adapted Vaccine Strains of the Pandemic 2009 H1N1 Swine Influenza A Virus.

scientific article

Molecular Characterization of Lipopolysaccharide Binding to Human α-1-Acid Glycoprotein

scientific article published on 20 December 2012

Molecular Docking of Carbohydrate Ligands to Antibodies: Structural Validation against Crystal Structures

scientific article published on 01 December 2009

Molecular Modelling: Advances in Biomolecular and Materials Modelling

scientific article published in 2011

Molecular Simulations of Carbohydrates with a Fucose-Binding Burkholderia ambifaria Lectin Suggest Modulation by Surface Residues Outside the Fucose-Binding Pocket

scientific article

New hybrids of clozapine and haloperidol and their isosteric analogues: synthesis, X-ray crystallography, conformational analysis and preliminary pharmacological evaluation

scholarly article by Ben Capuano et al published 5 February 2010 in Structural Chemistry

Novel adenosine A(2A) receptor ligands: a synthetic, functional and computational investigation of selected literature adenosine A(2A) receptor antagonists for extending into extracellular space

scientific article published on 2 April 2013

Peptide inhibitors of xenoreactive antibodies mimic the interaction profile of the native carbohydrate antigens

scientific article published on 01 January 2011

Probing the environment of nascent RNA in Escherichia coli transcription elongation complexes utilizing a new fluorescent ribonucleotide analog

scientific article published on March 1999

Recognition of IgG-Derived Peptides by a Human IgM with an Unusual Combining Site

scientific article published on 01 March 2002

Reply to ‘Response to Milland et al. : Carbohydrate residues downstream of the terminal galα(1,3)gal epitope modulate the specificity of xenoreactive antibodies’

Scaffolding the development of problem-solving skills in chemistry: guiding novice students out of dead ends and false starts

article

Sterically restrictive metal complexes. The synthesis and structural characterization of (1, 2-bis(6-methylpyridin-2-yl)ethane-N,N′)- (malonato)palladium(II) trihydrate. Proton NMR binding studies to cytosine and guanine derivatives

Structural Glycobiology of Antibody Recognition in Xenotransplantation and Cancer Immunotherapy

Structural basis for antibody targeting of the broadly expressed microbial polysaccharide poly-N-acetyl glucosamine.

scientific article published on 15 February 2018

Structural biology of antibody recognition of carbohydrate epitopes and potential uses for targeted cancer immunotherapies

scientific article

Synthesis, molecular structure, NMR spectroscopic and computational analysis of a selective adenosine A2A antagonist, ZM 241385

article published in 2012

Ten Simple Rules for Developing a MOOC

scientific article (publication date: October 2016)

The Acid/Base Profile of the Human Metabolome and Natural Products

scientific article published on 15 May 2013

The Synthesis and Preliminary Pharmacological Evaluation of a Series of Substituted 4'-Phenoxypropyl Analogues of the Atypical Antipsychotic Clozapine

scholarly article by Ben Capuano et al published 2010 in Australian Journal of Chemistry

The carbohydrate-binding promiscuity of Euonymus europaeus lectin is predicted to involve a single binding site.

scientific article published on 10 September 2014

The cationic small molecule GW4869 is cytotoxic to high phosphatidylserine-expressing myeloma cells

scientific article published on 17 February 2017

The design, synthesis and biological evaluation of novel URB602 analogues as potential monoacylglycerol lipase inhibitors

scientific article published on 18 September 2011

The significance of acid/base properties in drug discovery

scientific article published on January 2013

Three-dimensional structures of carbohydrate determinants of Lewis system antigens: implications for effective antibody targeting of cancer

scientific article

Toward activated homology models of the human M1 muscarinic acetylcholine receptor

scientific article published on 25 February 2014

Using the β2-Adrenoceptor for Structure-Based Drug Design

Virtual Screening Against Carbohydrate-Binding Proteins: Evaluation and Application to Bacterial Burkholderia ambifaria Lectin

scientific article published on 04 September 2018

List of works by Elizabeth Yuriev

'HELPA': a rapid means of student evaluation of lecturing performance in higher education

5,5′-(Piperazine-1,4-diyl)bis(8-chloropyrido[2,3-b][1,5]benzoxazepine)

8-Chloro-5-(4-phenethylpiperazin-1--yl)pyrido[2,3-b][1,5]benzoxazepine

A computational approach for exploring carbohydrate recognition by lectins in innate immunity

A double mutation of MBP83–99 peptide induces IL-4 responses and antagonizes IFN-γ responses

A glycopeptide in complex with MHC class I uses the GalNAc residue as an anchor

Adopting an active learning approach to teaching in a research-intensive higher education context transformed staff teaching attitudes and behaviours

Altered peptide ligands of myelin basic protein ( MBP87-99 ) conjugated to reduced mannan modulate immune responses in mice

Antibody recognition of aberrant glycosylation on the surface of cancer cells

Antibody recognition of cancer-related gangliosides and their mimics investigated using in silico site mapping

Antibody-Carbohydrate Recognition from Docked Ensembles Using the AutoMap Procedure

Antibody–ligand docking: insights into peptide–carbohydrate mimicry

AutoMap: a tool for analyzing protein-ligand recognition using multiple ligand binding modes.

Carbohydrate residues downstream of the terminal Galalpha(1,3)Gal epitope modulate the specificity of xenoreactive antibodies.

Carbohydrate-mimetic peptides: structural aspects of mimicry and therapeutic implications.

Carbohydrates in Cyberspace

Challenges and advances in computational docking: 2009 in review

Challenges and advances in structure-based virtual screening

Characterization of the N-Methyltransferase Activities of the Multifunctional Polypeptide Cyclosporin Synthetase

Computational Approaches for Studying Carbohydrate-Lectin Interactions in Infection

Conformational Analysis of Drug Molecules: A Practical Exercise in the Medicinal Chemistry Course

Crossword puzzles for chemistry education: learning goals beyond vocabulary

Detection and Prevention of Aggregation-based False Positives in STD-NMR-based Fragment Screening

Editorial: Structural and Computational Glycobiology - Immunity and Infection.

Flipped Classroom Implementation: A Case Report of Two Higher Education Institutions in the United States and Australia

Free Ig light chains interact with sphingomyelin and are found on the surface of myeloma plasma cells in an aggregated form

Gas phase supramolecular cluster ions of deoxyguanosine induced by binding to (2,2':6'2''-terpyridine)-platinum(II) and (diethylenetriamine)-platinum(II).

Gas-phase formation and reactions of radical cations of guanosine, deoxyguanosine and their homodimers and heterodimers

Geometric forms of 8-chloro-11-[4-(8-chloro-5H-dibenzo[b,e][1,4]diazepin-11-yl)piperazin-1-yl]-5H-dibenzo[b,e][1,4]diazepine–acetone–pentane (2/1/1)

Homobivalent ligands of the atypical antipsychotic clozapine: design, synthesis, and pharmacological evaluation.

Homology Modeling and Docking Evaluation of Human Muscarinic Acetylcholine Receptors

Homology modeling and docking evaluation of aminergic G protein-coupled receptors

Homology modeling of human muscarinic acetylcholine receptors

Identification of preferred carbohydrate binding modes in xenoreactive antibodies by combining conformational filters and binding site maps

Improvements, trends, and new ideas in molecular docking: 2012-2013 in review.

In silico analysis of antibody-carbohydrate interactions and its application to xenoreactive antibodies

Investigation of structure-activity relationships in a series of glibenclamide analogues.

Latest developments in molecular docking: 2010-2011 in review

Ligand Binding Pathways of Clozapine and Haloperidol in the Dopamine D2 and D3 Receptors.

Mannosylation of mutated MBP83-99 peptides diverts immune responses from Th1 to Th2.

Mcg light chain dimer as a model system for ligand design: a docking study

Molecular Characterisation of the Haemagglutinin Glycan-Binding Specificity of Egg-Adapted Vaccine Strains of the Pandemic 2009 H1N1 Swine Influenza A Virus.

Molecular Characterization of Lipopolysaccharide Binding to Human α-1-Acid Glycoprotein

Molecular Docking of Carbohydrate Ligands to Antibodies: Structural Validation against Crystal Structures

Molecular Modelling: Advances in Biomolecular and Materials Modelling

Molecular Simulations of Carbohydrates with a Fucose-Binding Burkholderia ambifaria Lectin Suggest Modulation by Surface Residues Outside the Fucose-Binding Pocket

New hybrids of clozapine and haloperidol and their isosteric analogues: synthesis, X-ray crystallography, conformational analysis and preliminary pharmacological evaluation

Novel adenosine A(2A) receptor ligands: a synthetic, functional and computational investigation of selected literature adenosine A(2A) receptor antagonists for extending into extracellular space

Peptide inhibitors of xenoreactive antibodies mimic the interaction profile of the native carbohydrate antigens

Probing the environment of nascent RNA in Escherichia coli transcription elongation complexes utilizing a new fluorescent ribonucleotide analog

Recognition of IgG-Derived Peptides by a Human IgM with an Unusual Combining Site

Reply to ‘Response to Milland et al. : Carbohydrate residues downstream of the terminal galα(1,3)gal epitope modulate the specificity of xenoreactive antibodies’

Scaffolding the development of problem-solving skills in chemistry: guiding novice students out of dead ends and false starts

Sterically restrictive metal complexes. The synthesis and structural characterization of (1, 2-bis(6-methylpyridin-2-yl)ethane-N,N′)- (malonato)palladium(II) trihydrate. Proton NMR binding studies to cytosine and guanine derivatives

Structural Glycobiology of Antibody Recognition in Xenotransplantation and Cancer Immunotherapy

Structural basis for antibody targeting of the broadly expressed microbial polysaccharide poly-N-acetyl glucosamine.

Structural biology of antibody recognition of carbohydrate epitopes and potential uses for targeted cancer immunotherapies

Synthesis, molecular structure, NMR spectroscopic and computational analysis of a selective adenosine A2A antagonist, ZM 241385

Ten Simple Rules for Developing a MOOC

The Acid/Base Profile of the Human Metabolome and Natural Products

The Synthesis and Preliminary Pharmacological Evaluation of a Series of Substituted 4'-Phenoxypropyl Analogues of the Atypical Antipsychotic Clozapine

The carbohydrate-binding promiscuity of Euonymus europaeus lectin is predicted to involve a single binding site.

The cationic small molecule GW4869 is cytotoxic to high phosphatidylserine-expressing myeloma cells

The design, synthesis and biological evaluation of novel URB602 analogues as potential monoacylglycerol lipase inhibitors

The significance of acid/base properties in drug discovery

Three-dimensional structures of carbohydrate determinants of Lewis system antigens: implications for effective antibody targeting of cancer

Toward activated homology models of the human M1 muscarinic acetylcholine receptor

Using the β2-Adrenoceptor for Structure-Based Drug Design

Virtual Screening Against Carbohydrate-Binding Proteins: Evaluation and Application to Bacterial Burkholderia ambifaria Lectin