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List of works by Mikael Rørdam Andersen

A Consensus Genome-scale Reconstruction of Chinese Hamster Ovary Cell Metabolism.

scientific article published on November 2016

A Scandcleft randomised trials of primary surgery for unilateral cleft lip and palate: 1. Planning and management

scientific article published in February 2017

A community-driven reconstruction of the metabolic network

scientific article published on 26 September 2018

A comparative genomics study of 23 Aspergillus species from section Flavi

scientific article published on 27 February 2020

A multi-pronged investigation into the effect of glucose starvation and culture duration on fed-batch CHO cell culture

scientific article published on 20 April 2015

A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species

scholarly article

A versatile system for USER cloning-based assembly of expression vectors for mammalian cell engineering

scientific article

Accurate prediction of secondary metabolite gene clusters in filamentous fungi ⬇️

scientific article

Aggressive dereplication using UHPLC-DAD-QTOF: screening extracts for up to 3000 fungal secondary metabolites

scientific article

Alcohol dehydrogenase gene ADH3 activates glucose alcoholic fermentation in genetically engineered Dekkera bruxellensis yeast.

scientific article published on 8 January 2016

Amino acid and glucose metabolism in fed-batch CHO cell culture affects antibody production and glycosylation

scientific article published on 10 October 2014

An Integrated Metabolomic and Genomic Mining Workflow To Uncover the Biosynthetic Potential of Bacteria

scientific article (publication date: 3 May 2016)

An Online Compendium of CHO RNA-Seq Data Allows Identification of CHO Cell Line-Specific Transcriptomic Signatures

scientific article published on 05 July 2018

Analysis of genetic variation and potential applications in genome-scale metabolic modeling

scientific article

Antibody Cross-Reactivity in Antivenom Research

scholarly article by Line Ledsgaard et al published 27 September 2018 in Toxins

Application of a curated genome-scale metabolic model of CHO DG44 to an industrial fed-batch process

scientific article published on 15 September 2018

Application of a genome-scale model in tandem with enzyme assays for identification of metabolic signatures of high and low CHO cell producers

scientific article published on 01 August 2019

Aspergillus nidulans synthesize insect juvenile hormones upon expression of a heterologous regulatory protein and in response to grazing by Drosophila melanogaster larvae

scientific article

BCAT1 and BCAT2 disruption in CHO cells has cell line-dependent effects

scientific article published on 26 August 2019

CRISPR/Cas9-Multiplexed Editing of Chinese Hamster Ovary B4Gal-T1, 2, 3, and 4 Tailors N-Glycan Profiles of Therapeutics and Secreted Host Cell Proteins

article

Cell Factory Engineering

scientific article published on March 2017

Characterization of glutathione proteome in CHO cells and its relationship with productivity and cholesterol synthesis

scientific article published on 14 July 2020

Chemical Diversity of Locked Nucleic Acid-Modified Antisense Oligonucleotides Allows Optimization of Pharmaceutical Properties

scientific article published on 18 December 2019

Combining Stable Isotope Labeling and Molecular Networking for Biosynthetic Pathway Characterization

scientific article published on 9 June 2015

Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88 ⬇️

scientific article

Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

scientific article

Cross-recognition of a pit viper (Crotalinae) polyspecific antivenom explored through high-density peptide microarray epitope mapping

scientific article published on 14 July 2017

Current challenges of research on filamentous fungi in relation to human welfare and a sustainable bio-economy: a white paper.

scientific article published on 31 August 2016

Current state of genome-scale modeling in filamentous fungi

scientific article

Deciphering the signaling mechanisms of the plant cell wall degradation machinery in Aspergillus oryzae

scientific article

Deep sequencing reveals different compositions of mRNA transcribed from the F8 gene in a panel of FVIII-producing CHO cell lines

scientific article published on 26 May 2015

Elucidation of primary metabolic pathways in Aspergillus species: orphaned research in characterizing orphan genes.

scientific article

Endoplasmic reticulum-directed recombinant mRNA displays subcellular localization equal to endogenous mRNA during transient expression in CHO cells

scientific article published on 14 September 2016

Engineer Medium and Feed for Modulating N-Glycosylation of Recombinant Protein Production in CHO Cell Culture

scientific article published in January 2017

Erratum to: Alcohol dehydrogenase gene ADH3 activates glucose alcoholic fermentation in genetically engineered Dekkera bruxellensis yeast

scientific article published on 6 February 2016

Essential pathway identification: from in silico analysis to potential antifungal targets in Aspergillus fumigatus

scientific article published on 27 February 2009

Fed-Batch CHO Cell Culture for Lab-Scale Antibody Production

scientific article published in January 2018

Full transcriptome analysis of Chinese Hamster Ovary cell lines producing a dynamic range of Coagulation Factor VIII.

scientific article published on 4 December 2013

FunGeneClusterS: Predicting fungal gene clusters from genome and transcriptome data.

scientific article published on 23 February 2016

Genetic engineering approaches to improve posttranslational modification of biopharmaceuticals in different production platforms

scientific article published on 21 July 2019

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

scientific article

Genus level analysis of PKS-NRPS and NRPS-PKS hybrids reveals their origin in Aspergilli

scientific article published on 13 November 2019

Glyco-engineered CHO cell lines producing alpha-1-antitrypsin and C1 esterase inhibitor with fully humanized N-glycosylation profiles

scientific article published on 01 December 2018

Glycoengineering in CHO cells: Advances in systems biology.

scientific article published on 5 January 2018

Glycoengineering of Chinese hamster ovary cells for enhanced erythropoietin N-glycan branching and sialylation

scientific article

Glycoprofiling effects of media additives on IgG produced by CHO cells in fed-batch bioreactors

scientific article published on 29 July 2015

High-throughput immuno-profiling of mamba (Dendroaspis) venom toxin epitopes using high-density peptide microarrays

scientific article

Hydrophobins from Aspergillus species cannot be clearly divided into two classes

scientific article

Identification of a transcription factor controlling pH-dependent organic acid response in Aspergillus niger

scientific article

Impact of CHO Metabolism on Cell Growth and Protein Production: An Overview of Toxic and Inhibiting Metabolites and Nutrients.

scientific article published on 2 February 2018

Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri

article

Linker Flexibility Facilitates Module Exchange in Fungal Hybrid PKS-NRPS Engineering

scientific article

Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species ⬇️

scientific article published on 9 January 2018

Mapping the polysaccharide degradation potential of Aspergillus niger

scientific article

Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger

scientific article

Minimizing Clonal Variation during Mammalian Cell Line Engineering for Improved Systems Biology Data Generation

scientific article published on 16 August 2018

Model-based analysis of N-glycosylation in Chinese hamster ovary cells

scientific article

Multi-omic profiling -of EPO-producing Chinese hamster ovary cell panel reveals metabolic adaptation to heterologous protein production

scientific article published on 20 May 2015

Network reconstruction of the mouse secretory pathway applied on CHO cell transcriptome data

scientific article

Novofumigatonin biosynthesis involves a non-heme iron-dependent endoperoxide isomerase for orthoester formation.

scientific article published on 3 July 2018

Overexpression of isocitrate lyase-glyoxylate bypass influence on metabolism in Aspergillus niger

scientific article published in March 2009

Oxidative stress-alleviating strategies to improve recombinant protein production in CHO cells

scientific article published on 20 December 2019

Pitfalls to avoid when using phage display for snake toxins.

scientific article

Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae

scientific article published on March 2009

Pros and cons of different therapeutic antibody formats for recombinant antivenom development

article

Proteome analysis of Aspergillus niger: lactate added in starch-containing medium can increase production of the mycotoxin fumonisin B2 by modifying acetyl-CoA metabolism

scientific article

Recombinant snakebite antivenoms: A cost-competitive solution to a neglected tropical disease?

scientific article published on 3 February 2017

Reprogramming AA catabolism in CHO cells with CRISPR/Cas9 genome editing improves cell growth and reduces byproduct secretion

scientific article published on 14 September 2019

Resistance Gene-Directed Genome Mining of 50 Species

article

Ribosome profiling-guided depletion of an mRNA increases cell growth rate and protein secretion

scientific article published on 16 January 2017

Scandcleft Project, Trial 1: Comparison of Speech Outcome in Relation to Timing of Hard Palate Closure in 5-Year-Olds With UCLP

scientific article published on 12 June 2019

Sequencing the CHO DXB11 genome reveals regional variations in genomic stability and haploidy

scientific article published on 8 March 2015

Strategies to establish the link between biosynthetic gene clusters and secondary metabolites

scientific article published on 10 June 2019

Studies of the production of fungal polyketides in Aspergillus nidulans by using systems biology tools

scientific article published on 23 January 2009

Supercluster takes a walk on the wild side

scientific article published on 14 November 2013

Systematic Evaluation of Site-Specific Recombinant Gene Expression for Programmable Mammalian Cell Engineering

scientific article published on 12 March 2019

Systemic analysis of the response of Aspergillus niger to ambient pH.

scientific article published on May 2009

Systems analysis unfolds the relationship between the phosphoketolase pathway and growth in Aspergillus nidulans

scientific article

The 2008 update of the Aspergillus nidulans genome annotation: a community effort

scientific article

The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line

scientific article

The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi

scientific article published on 01 September 2018

Toward genome-scale models of the Chinese hamster ovary cells: incentives, status and perspectives

article

Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication

scientific article published in Scientific Reports

Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysis

scientific article

Using Titer and Titer Normalized to Confluence Are Complementary Strategies for Obtaining Chinese Hamster Ovary Cell Lines with High Volumetric Productivity of Etanercept

scientific article published on 23 January 2018

Versatile microscale screening platform for improving recombinant protein productivity in Chinese hamster ovary cells

scientific article

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