List of works - Marina Serebryakova

A Trojan-Horse Peptide-Carboxymethyl-Cytidine Antibiotic from Bacillus amyloliquefaciens

scientific article published on 29 November 2016

A major portion of DNA gyrase inhibitor microcin B17 undergoes an N,O-peptidyl shift during synthesis

scientific article published on 31 May 2011

A nascent proteome study combining click chemistry with 2DE

scientific article

Adaptation of mycoplasmas to adverse environments: Phytopathogenicity and peculiarities of protein expression of vegetative and nonculturable forms of Mycoplasma gallisepticum S6 cells

scientific article published on 01 September 2009

Alternative pyrimidine biosynthesis protein ApbE is a flavin transferase catalyzing covalent attachment of FMN to a threonine residue in bacterial flavoproteins.

scientific article

Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome

scientific article

Amyloid-β with isomerized Asp7 cytotoxicity is coupled to protein phosphorylation.

scientific article published on 23 February 2018

Application of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the study of Helicobacter pylori

scientific article

Architecture of Microcin B17 Synthetase: An Octameric Protein Complex Converting a Ribosomally Synthesized Peptide into a DNA Gyrase Poison

scientific article published on 17 January 2019

Autoantibodies to myelin basic protein catalyze site-specific degradation of their antigen

scientific article

Biosynthesis of Translation Inhibitor Klebsazolicin Proceeds through Heterocyclization and N-Terminal Amidine Formation Catalyzed by a Single YcaO Enzyme.

scientific article published on 30 March 2018

Byproduct with altered fluorescent properties is formed during standard deprotection step of hexachlorofluorescein labeled oligonucleotides.

scientific article published on 14 July 2009

Catalytically important flavin linked through a phosphoester bond in a eukaryotic fumarate reductase

scientific article published on 03 April 2018

Characterization of the 20S proteasome of the lepidopteran, Spodoptera frugiperda

scientific article published on 19 June 2019

Chemical polysialylation of human recombinant butyrylcholinesterase delivers a long-acting bioscavenger for nerve agents in vivo.

scientific article published on 7 January 2013

Cold co-extraction of hemagglutinin and matrix M1 protein from influenza virus A by a combination of non-ionic detergents allows for visualization of the raft-like nature of the virus envelope

scientific article published on 30 September 2008

Comparative analysis of proteome maps of Helicobacter pylori clinical isolates.

scientific article

Comparative proteomic characteristic of mycoplasmas (Mollicutes)

scientific article published on 01 January 2011

Complete Genome and Proteome of Acholeplasma laidlawii ⬇️

scientific article published on July 22, 2011

Conformational changes in inter-α-trypsin inhibitor heavy chain 4 activate its tumor-specific activity in mice with B16 melanoma.

scientific article

Core proteome of the minimal cell: comparative proteomics of three mollicute species

scientific article

Database search post-processing by neural network: Advanced facilities for identification of components in protein mixtures using mass spectrometric peptide mapping.

scientific article

Differential S-Acylation of Enveloped Viruses

scientific article published on 01 January 2019

Dimerization of Tyr136Cys alpha-synuclein prevents amyloid transformation of wild type alpha-synuclein.

scientific article published on 06 December 2016

Dipeptidyl peptidase 4 - An important digestive peptidase in Tenebrio molitor larvae

scientific article published on 6 July 2016

Direct incorporation of 18O isotopes into peptides and proteins for quantative analysis by mass spectrometry method

scientific article

Domain organization of the N-terminal portion of hordeivirus movement protein TGBp1.

scientific article published on 12 August 2009

Effect of methylglyoxal modification on the structure and properties of human small heat shock protein HspB6 (Hsp20)

scientific article

Enzymatic Synthesis and Functional Characterization of Bioactive Microcin C-Like Compounds with Altered Peptide Sequence and Length

scientific article published on 20 July 2015

Enzymatic synthesis of bioinformatically predicted microcin C-like compounds encoded by diverse bacteria

scientific article

Escherichia coli ItaT is a type II toxin that inhibits translation by acetylating isoleucyl-tRNAIle

Functional degradation of myelin basic protein. Proteomic approach

scientific article published in January 2011

Glutenase and collagenase activities of wheat cysteine protease Triticain-α: feasibility for enzymatic therapy assays

scientific article published on 10 March 2015

Identification in the rat olfactory epithelium new subgroup YM-1 chitinase-like protein

scientific article

Influenza A hemagglutinin C-terminal anchoring peptide: identification and mass spectrometric study

scientific article

Influenza A virus M1 protein structure probed by in situ limited proteolysis with bromelain.

scientific article

Influenza virus hemagglutinin spike neck architectures and interaction with model enzymes evaluated by MALDI-TOF mass spectrometry and bioinformatics tools.

scientific article

Inhibition of the GTPase dynamin or actin depolymerisation initiates outward plasma membrane tubulation/vesiculation (cytoneme formation) in neutrophils.

scientific article published on 16 March 2015

Isolated Potato Virus A coat protein possesses unusual properties and forms different short virus-like particles

scientific article published on 24 May 2017

Isolation and characterization of a novel indigenous intestinal N4-related coliphage vB_EcoP_G7C.

scientific article published on 15 February 2012

Isolation of influenza virus A hemagglutinin C-terminal domain by hemagglutinin proteolysis in octylglucoside micelles

scientific article

Klebsazolicin inhibits 70S ribosome by obstructing the peptide exit tunnel. ⬇️

scientific article published on 28 August 2017

Light-induced disulfide dimerization of recoverin under ex vivo and in vivo conditions

scientific article published on 12 March 2015

Linker and/or transmembrane regions of influenza A/Group-1, A/Group-2, and type B virus hemagglutinins are packed differently within trimers

scientific article

Mass spectrometric approaches to study enveloped viruses: New possibilities for structural biology and prophylactic medicine ⬇️

scientific article published on August 1, 2012

Mass spectrometric sequencing and acylation character analysis of C-terminal anchoring segment from Influenza A hemagglutinin

scientific article published in January 2006

Mass spectrometry analysis of influenza virus reassortant clones does not reveal an influence of other viral proteins on S-acylation of hemagglutinin.

scientific article published on 12 October 2012

Mechanisms of perioperative corneal abrasions: alterations in tear film proteome

scientific article published in November 2016

Modification by glyceraldehyde-3-phosphate prevents amyloid transformation of alpha-synuclein

scientific article published on 10 January 2019

Modified nucleotides m(2)G966/m(5)C967 of Escherichia coli 16S rRNA are required for attenuation of tryptophan operon.

scientific article

Mold Alkaloid Cytochalasin D Modifies the Morphology and Secretion of fMLP-, LPS-, or PMA-Stimulated Neutrophils upon Adhesion to Fibronectin

scientific article published on 27 June 2017

Mutational robustness and resilience of a replicative cis-element of RNA virus: Promiscuity, limitations, relevance

scientific article published on 21 October 2015

Mycoplasma gallisepticum produces a histone-like protein that recognizes base mismatches in DNA.

scientific article

N-Terminal segment of potato virus X coat protein subunits is glycosylated and mediates formation of a bound water shell on the virion surface

scientific article

Naturally occurring disulfide-bound dimers of three-fingered toxins: a paradigm for biological activity diversification

scientific article

Neutrophils Release Metalloproteinases during Adhesion in the Presence of Insulin, but Cathepsin G in the Presence of Glucagon.

scientific article

Non-stressful death of 23S rRNA mutant G2061C defective in puromycin reaction.

scientific article

NqrM (DUF539) Protein Is Required for Maturation of Bacterial Na+-Translocating NADH:Quinone Oxidoreductase

scientific article published on 07 December 2015

Oligomeric protein complexes of apolipoproteins stabilize the internal fluid environment of organism in redfins of the Tribolodon genus [Pisces; Cypriniformes, Cyprinidae].

scientific article published in March 2017

Orthologues of a plant-specific At-4/1 gene in the genus Nicotiana and the structural properties of bacterially expressed 4/1 protein

scientific article

Ovarian cancer marker of 11.7 kDa detected by proteomics is a serum amyloid A1.

scientific article

Palmitoylation of influenza virus proteins

scientific article published on 01 February 2013

Peculiarities of hemoglobin interaction with serum proteins of mice with Ehrlich carcinoma.

scientific article

Peptides from puff adder Bitis arietans venom, novel inhibitors of nicotinic acetylcholine receptors

scientific article

Phytaspase-mediated precursor processing and maturation of the wound hormone systemin

scientific article published on 13 April 2017

Possible Role of Escherichia coli Protein YbgI

scientific article published on 01 March 2018

Proteome analysis identified human neutrophil membrane tubulovesicular extensions (cytonemes, membrane tethers) as bactericide trafficking

scientific article published on 2 July 2012

Proteomic characterization of Mycoplasma gallisepticum nanoforming

scientific article published on 01 October 2010

Proteomics of the 26S proteasome in Spodoptera frugiperda cells infected with the nucleopolyhedrovirus, AcMNPV.

scientific article

Purification and functional analysis of recombinant Acholeplasma laidlawii histone-like HU protein

scientific article published on 01 April 2011

Purification and primary structure of novel lipid transfer proteins from germinated lentil (Lens culinaris) seeds.

scientific article published in April 2007

Reorganization of low-molecular-weight fraction of plasma proteins in the annual cycle of cyprinidae.

scientific article published in February 2015

Responses of Acholeplasma laidlawii PG8 cells to cold shock and oxidative stress: Proteomic analysis and stress-reactive mycoplasma proteins

article

Routes to covalent catalysis by reactive selection for nascent protein nucleophiles

scientific article

S acylation of the hemagglutinin of influenza viruses: mass spectrometry reveals site-specific attachment of stearic acid to a transmembrane cysteine.

scientific article

S-Acylation of Proteins

scientific article published on 01 January 2019

S-glutathionylation of glyceraldehyde-3-phosphate dehydrogenase induces formation of C150-C154 intrasubunit disulfide bond in the active site of the enzyme

scientific article

Scorpion toxins interact with nicotinic acetylcholine receptors

scientific article published on 18 July 2019

Site-specific S-acylation of influenza virus hemagglutinin: the location of the acylation site relative to the membrane border is the decisive factor for attachment of stearate.

scientific article

Site-specific attachment of palmitate or stearate to cytoplasmic versus transmembrane cysteines is a common feature of viral spike proteins

scientific article published on 16 December 2009

Sorting Out Antibiotics' Mechanisms of Action: a Double Fluorescent Protein Reporter for High-Throughput Screening of Ribosome and DNA Biosynthesis Inhibitors

scientific article published on 10 October 2016

Spatial structure peculiarities of influenza A virus matrix M1 protein in an acidic solution that simulates the internal lysosomal medium

scientific article

Stearic acid blunts growth-factor signaling via oleoylation of GNAI proteins

scientific article published on 28 July 2021

Structural investigation of influenza virus hemagglutinin membrane-anchoring peptide

scientific article

Structure of ribosome-bound azole-modified peptide phazolicin rationalizes its species-specific mode of bacterial translation inhibition

scientific article published on 08 October 2019

Substrate Specificity and Possible Heterologous Targets of Phytaspase, a Plant Cell Death Protease

scientific article published on 17 August 2015

Surface characterization of the thermal remodeling helical plant virus

scientific article published on 31 May 2019

Synthesis of New Polyazamacrocycles Incorporating the Pyridine Moiety

The C-terminal part of microcin B is crucial for DNA gyrase inhibition and antibiotic uptake by sensitive cells

scientific article published on 21 February 2014

The GAR domain integrates functions that are necessary for the proper localization of fibrillarin (FBL) inside eukaryotic cells

scientific article published on 28 April 2020

The Origins of Specificity in the Microcin-Processing Protease TldD/E.

scientific article

The Product of Yersinia pseudotuberculosis mcc Operon Is a Peptide-Cytidine Antibiotic Activated Inside Producing Cells by the TldD/E Protease

scientific article

The acylation state of surface lipoproteins of mollicute Acholeplasma laidlawii

scientific article published on 3 May 2011

The last rRNA methyltransferase of E. coli revealed: the yhiR gene encodes adenine-N6 methyltransferase specific for modification of A2030 of 23S ribosomal RNA.

scientific article published on 30 July 2012

The mechanism of microcin C resistance provided by the MccF peptidase

scientific article

The molecular mechanism of aminopropylation of peptide-nucleotide antibiotic microcin C.

scientific article

The obtaining and analysis of physiological activity of secreted proteins of Noggin family

scientific article

The role of intracellular glutathione in the progression of Chlamydia trachomatis infection

scientific article published on 29 September 2010

The ybiN gene of Escherichia coli encodes adenine-N6 methyltransferase specific for modification of A1618 of 23 S ribosomal RNA, a methylated residue located close to the ribosomal exit tunnel

scientific article

The yfiC gene of E. coli encodes an adenine-N6 methyltransferase that specifically modifies A37 of tRNA1Val(cmo5UAC)

scientific article

Thrombin-Mediated Degradation of Human Cardiac Troponin T.

scientific article published on 20 April 2017

Trastuzumab and Pertuzumab Plant Biosimilars: Modification of Asn297-linked Glycan of the mAbs Produced in a Plant with Fucosyltransferase and Xylosyltransferase Gene Knockouts

scientific article

Tritium planigraphy study of structural alterations in the coat protein of Potato virus X induced by binding of its triple gene block 1 protein to virions.

scientific article

Two-dimensional electrophoretic proteome study of serum thermostable fraction from patients with various tumor conditions.

scientific article published in April 2006

Vietnamese Heterometrus laoticus scorpion venom: evidence for analgesic and anti-inflammatory activity and isolation of new polypeptide toxin acting on Kv1.3 potassium channel.

scientific article

codes for a mitochondrial peptide linking respiration and lipid metabolism

scientific article published on 22 February 2019

eIF4G2 balances its own mRNA translation via a PCBP2-based feedback loop

scientific article published on 22 April 2019

List of works by Marina Serebryakova

A Trojan-Horse Peptide-Carboxymethyl-Cytidine Antibiotic from Bacillus amyloliquefaciens

A major portion of DNA gyrase inhibitor microcin B17 undergoes an N,O-peptidyl shift during synthesis

A nascent proteome study combining click chemistry with 2DE

Adaptation of mycoplasmas to adverse environments: Phytopathogenicity and peculiarities of protein expression of vegetative and nonculturable forms of Mycoplasma gallisepticum S6 cells

Alternative pyrimidine biosynthesis protein ApbE is a flavin transferase catalyzing covalent attachment of FMN to a threonine residue in bacterial flavoproteins.

Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome

Amyloid-β with isomerized Asp7 cytotoxicity is coupled to protein phosphorylation.

Application of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the study of Helicobacter pylori

Architecture of Microcin B17 Synthetase: An Octameric Protein Complex Converting a Ribosomally Synthesized Peptide into a DNA Gyrase Poison

Autoantibodies to myelin basic protein catalyze site-specific degradation of their antigen

Biosynthesis of Translation Inhibitor Klebsazolicin Proceeds through Heterocyclization and N-Terminal Amidine Formation Catalyzed by a Single YcaO Enzyme.

Byproduct with altered fluorescent properties is formed during standard deprotection step of hexachlorofluorescein labeled oligonucleotides.

Catalytically important flavin linked through a phosphoester bond in a eukaryotic fumarate reductase

Characterization of the 20S proteasome of the lepidopteran, Spodoptera frugiperda

Chemical polysialylation of human recombinant butyrylcholinesterase delivers a long-acting bioscavenger for nerve agents in vivo.

Cold co-extraction of hemagglutinin and matrix M1 protein from influenza virus A by a combination of non-ionic detergents allows for visualization of the raft-like nature of the virus envelope

Comparative analysis of proteome maps of Helicobacter pylori clinical isolates.

Comparative proteomic characteristic of mycoplasmas (Mollicutes)

Complete Genome and Proteome of Acholeplasma laidlawii ⬇️

Conformational changes in inter-α-trypsin inhibitor heavy chain 4 activate its tumor-specific activity in mice with B16 melanoma.

Core proteome of the minimal cell: comparative proteomics of three mollicute species

Database search post-processing by neural network: Advanced facilities for identification of components in protein mixtures using mass spectrometric peptide mapping.

Differential S-Acylation of Enveloped Viruses

Dimerization of Tyr136Cys alpha-synuclein prevents amyloid transformation of wild type alpha-synuclein.

Dipeptidyl peptidase 4 - An important digestive peptidase in Tenebrio molitor larvae

Direct incorporation of 18O isotopes into peptides and proteins for quantative analysis by mass spectrometry method

Domain organization of the N-terminal portion of hordeivirus movement protein TGBp1.

Effect of methylglyoxal modification on the structure and properties of human small heat shock protein HspB6 (Hsp20)

Enzymatic Synthesis and Functional Characterization of Bioactive Microcin C-Like Compounds with Altered Peptide Sequence and Length

Enzymatic synthesis of bioinformatically predicted microcin C-like compounds encoded by diverse bacteria

Escherichia coli ItaT is a type II toxin that inhibits translation by acetylating isoleucyl-tRNAIle

Functional degradation of myelin basic protein. Proteomic approach

Glutenase and collagenase activities of wheat cysteine protease Triticain-α: feasibility for enzymatic therapy assays

Identification in the rat olfactory epithelium new subgroup YM-1 chitinase-like protein

Influenza A hemagglutinin C-terminal anchoring peptide: identification and mass spectrometric study

Influenza A virus M1 protein structure probed by in situ limited proteolysis with bromelain.

Influenza virus hemagglutinin spike neck architectures and interaction with model enzymes evaluated by MALDI-TOF mass spectrometry and bioinformatics tools.

Inhibition of the GTPase dynamin or actin depolymerisation initiates outward plasma membrane tubulation/vesiculation (cytoneme formation) in neutrophils.

Isolated Potato Virus A coat protein possesses unusual properties and forms different short virus-like particles

Isolation and characterization of a novel indigenous intestinal N4-related coliphage vB_EcoP_G7C.

Isolation of influenza virus A hemagglutinin C-terminal domain by hemagglutinin proteolysis in octylglucoside micelles

Klebsazolicin inhibits 70S ribosome by obstructing the peptide exit tunnel. ⬇️

Light-induced disulfide dimerization of recoverin under ex vivo and in vivo conditions

Linker and/or transmembrane regions of influenza A/Group-1, A/Group-2, and type B virus hemagglutinins are packed differently within trimers

Mass spectrometric approaches to study enveloped viruses: New possibilities for structural biology and prophylactic medicine ⬇️

Mass spectrometric sequencing and acylation character analysis of C-terminal anchoring segment from Influenza A hemagglutinin

Mass spectrometry analysis of influenza virus reassortant clones does not reveal an influence of other viral proteins on S-acylation of hemagglutinin.

Mechanisms of perioperative corneal abrasions: alterations in tear film proteome

Modification by glyceraldehyde-3-phosphate prevents amyloid transformation of alpha-synuclein

Modified nucleotides m(2)G966/m(5)C967 of Escherichia coli 16S rRNA are required for attenuation of tryptophan operon.

Mold Alkaloid Cytochalasin D Modifies the Morphology and Secretion of fMLP-, LPS-, or PMA-Stimulated Neutrophils upon Adhesion to Fibronectin

Mutational robustness and resilience of a replicative cis-element of RNA virus: Promiscuity, limitations, relevance

Mycoplasma gallisepticum produces a histone-like protein that recognizes base mismatches in DNA.

N-Terminal segment of potato virus X coat protein subunits is glycosylated and mediates formation of a bound water shell on the virion surface

Naturally occurring disulfide-bound dimers of three-fingered toxins: a paradigm for biological activity diversification

Neutrophils Release Metalloproteinases during Adhesion in the Presence of Insulin, but Cathepsin G in the Presence of Glucagon.

Non-stressful death of 23S rRNA mutant G2061C defective in puromycin reaction.

NqrM (DUF539) Protein Is Required for Maturation of Bacterial Na+-Translocating NADH:Quinone Oxidoreductase

Oligomeric protein complexes of apolipoproteins stabilize the internal fluid environment of organism in redfins of the Tribolodon genus [Pisces; Cypriniformes, Cyprinidae].

Orthologues of a plant-specific At-4/1 gene in the genus Nicotiana and the structural properties of bacterially expressed 4/1 protein

Ovarian cancer marker of 11.7 kDa detected by proteomics is a serum amyloid A1.

Palmitoylation of influenza virus proteins

Peculiarities of hemoglobin interaction with serum proteins of mice with Ehrlich carcinoma.

Peptides from puff adder Bitis arietans venom, novel inhibitors of nicotinic acetylcholine receptors

Phytaspase-mediated precursor processing and maturation of the wound hormone systemin

Possible Role of Escherichia coli Protein YbgI

Proteome analysis identified human neutrophil membrane tubulovesicular extensions (cytonemes, membrane tethers) as bactericide trafficking

Proteomic characterization of Mycoplasma gallisepticum nanoforming

Proteomics of the 26S proteasome in Spodoptera frugiperda cells infected with the nucleopolyhedrovirus, AcMNPV.

Purification and functional analysis of recombinant Acholeplasma laidlawii histone-like HU protein

Purification and primary structure of novel lipid transfer proteins from germinated lentil (Lens culinaris) seeds.

Reorganization of low-molecular-weight fraction of plasma proteins in the annual cycle of cyprinidae.

Responses of Acholeplasma laidlawii PG8 cells to cold shock and oxidative stress: Proteomic analysis and stress-reactive mycoplasma proteins

Routes to covalent catalysis by reactive selection for nascent protein nucleophiles

S acylation of the hemagglutinin of influenza viruses: mass spectrometry reveals site-specific attachment of stearic acid to a transmembrane cysteine.

S-Acylation of Proteins

S-glutathionylation of glyceraldehyde-3-phosphate dehydrogenase induces formation of C150-C154 intrasubunit disulfide bond in the active site of the enzyme

Scorpion toxins interact with nicotinic acetylcholine receptors

Site-specific S-acylation of influenza virus hemagglutinin: the location of the acylation site relative to the membrane border is the decisive factor for attachment of stearate.