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List of works by Robert J. Henry

A Highly Efficient and Reproducible Fusarium spp. Inoculation Method for Brachypodium distachyon.

scientific article published in January 2018

A comprehensive genetic map of sugarcane that provides enhanced map coverage and integrates high-throughput Diversity Array Technology (DArT) markers

scientific article

A high-throughput assay for rapid and simultaneous analysis of perfect markers for important quality and agronomic traits in rice using multiplexed MALDI-TOF mass spectrometry

scientific article

A method for discovery of genome-wide SNP between any two genotypes from whole-genome re-sequencing data

scientific article

A mosaic monoploid reference sequence for the highly complex genome of sugarcane.

scientific article published on 6 July 2018

A novel highly differentially expressed gene in wheat endosperm associated with bread quality

scientific article

A single nucleotide polymorphism (SNP) marker linked to the fragrance gene in rice (Oryza sativa L.)

article

A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing

scientific article

Abundant transcripts of malting barley identified by serial analysis of gene expression (SAGE).

scientific article

Adaptive climatic molecular evolution in wild barley at the Isa defense locus.

scholarly article

Advances in Molecular Genetics and Genomics of African Rice (Oryza glaberrima Steud)

scientific article published on 26 September 2019

Advances in genomics for the improvement of quality in coffee.

scientific article

Advances in understanding salt tolerance in rice

scientific article published on 13 February 2019

Aleurone and subaleurone morphology in native Australian wild cereal relatives

article

Allele expression biases in mixed-ploid sugarcane accessions

scientific article published on 24 May 2022

Amplification of a GC-rich sequence from barley by a two-step polymerase chain reaction in glycerol

An assay for glycosyltransferases using phenol partition and gas-liquid chromatography

scientific article published on 01 October 1978

An optimized ecotilling protocol for polyploids or pooled samples using a capillary electrophoresis system.

scientific article

Analysis of adaptive ribosomal gene diversity in wild plant populations from contrasting climatic environments

scientific article published on 14 May 2012

Analysis of grape ESTs: global gene expression patterns in leaf and berry

scientific article

Analysis of promoters in transgenic barley and wheat

scientific article published on 16 January 2009

Analysis of the diversity and tissue specificity of sucrose synthase genes in the long read transcriptome of sugarcane

article

Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus

article

Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects

scientific article (publication date: 2015)

Application of large-scale sequencing to marker discovery in plants

scientific article

Association of gene expression with biomass content and composition in sugarcane.

scientific article published on 17 August 2017

Association of variation in the sugarcane transcriptome with sugar content

scientific article published on 25 November 2017

Australia's Role in Feeding the World, The Future of Australian Agriculture, edited by TorHundloe, SarahBlagrove and HannahDitton (Eds). Published by CSIRO Publishing, Clayton, VIC, Australia, 2016, 288 pp, ISBN: 9781486305896, AU$ 59.95

article

Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome

scientific article

Betaine aldehyde dehydrogenase in plants.

scientific article published on March 2009

Biotic exchange leaves detectable genomic patterns in the Australian rain forest flora

scientific article published on 29 March 2020

Brachypodium as an emerging model for cereal-pathogen interactions

scientific article

Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree

scientific article

Characterisation of microsatellite markers from sugarcane (Saccharum sp.), a highly polyploid species.

scientific article

Characterisation of single nucleotide polymorphisms in sugarcane ESTs.

scientific article

Characterizing homologues of crop domestication genes in poorly described wild relatives by high-throughput sequencing of whole genomes.

scientific article

Chloroplast Genome of Novel Rice Germplasm Identified in Northern Australia

scientific article

Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice ⬇️

scientific article published on January 1, 2012

Chloroplast genome sequences from total DNA for plant identification.

scientific article published on 27 August 2010

Chloroplast phylogeography of AA genome rice species

scientific article published on 16 May 2018

Commentary: New evidence for grain specific C4 photosynthesis in wheat

scientific article published on 19 October 2016

Comparative Transcriptome Profiling of Resistant and Susceptible Sugarcane Cultivars in Response to Infection by Xanthomonas albilineans ⬇️

scientific article published on 05 December 2019

Comparative genomics analysis in Prunoideae to identify biologically relevant polymorphisms

scientific article published on 13 June 2013

Comparison of promoters in transgenic rice

scientific article published on 22 May 2008

Complete chloroplast genome sequence of Magnolia grandiflora and comparative analysis with related species

scientific article published on 18 January 2013

Conservation and utilization of African Oryza genetic resources.

scientific article

Contrasting breeding systems revealed in the rainforest genus Davidsonia (Cunoniaceae): can polyembryony turn the tables on rarity?

scientific article published in 2014

Corrigendum to “Fragrance in rice (Oryza sativa) is associated with reduced yield under salt treatment”

scholarly article published in Environmental and Experimental Botany

Crop wild relatives as a genetic resource for generating low-cyanide, drought-tolerant Sorghum

scientific article

Cyanogenesis in the Sorghum Genus: From Genotype to Phenotype

scientific article published on 14 January 2022

DNA banks and their role in facilitating the application of genomics to plant germplasm

article

DNA banks as a resource for SNP genotyping

DNA extraction from plant tissue

article

De novo assembly and characterizing of the culm-derived meta-transcriptome from the polyploid sugarcane genome based on coding transcripts.

scientific article

Dichloroaromatic phosphoguanidines are potent inhibitors but very poor substrates for cytosolic creatine kinase

scientific article published in June 1997

Differential expression in leaves of Saccharum genotypes contrasting in biomass production provides evidence of genes involved in carbon partitioning

scientific article published on 29 September 2020

Direct chloroplast sequencing: comparison of sequencing platforms and analysis tools for whole chloroplast barcoding

scientific article

Discovery of polymorphisms in starch-related genes in rice germplasm by amplification of pooled DNA and deeply parallel sequencing.

scientific article published on 7 June 2011

Diversity and evolution of rice progenitors in Australia.

scientific article

Does C4 Photosynthesis Occur in Wheat Seeds?

scientific article

Domestication to Crop Improvement: Genetic Resources for Sorghum and Saccharum (Andropogoneae)

scientific article (publication date: September 2007)

Dormancy breaking procedures and the breeding of white-grained wheat with resistance to pre-harvest sprouting

Editorial: Biomass Modification, Characterization, and Process Monitoring Analytics to Support Biofuel and Biomaterial Production

scientific article

Effects of genotype and temperature on accumulation of plant secondary metabolites in Canadian and Australian wheat grown under controlled environments

scientific article published on 22 August 2017

Endonucleolytic mutation analysis by internal labeling (EMAIL)

scientific article published on 01 March 2008

Endosperm and starch granule morphology in wild cereal relatives

article published in 2008

Enrichment of genomic DNA for polymorphism detection in a non-model highly polyploid crop plant.

scientific article

Eucalypts as a biofuel feedstock

article

Evaluating the potential of SSR flanking regions for examining taxonomic relationships in the Vitaceae

scientific article published in January 2002

Evaluating the sensory properties of unpolished Australian wild rice

scientific article published on 21 October 2017

Evaluation of Relationships between Growth Rate, Tree Size, Lignocellulose Composition, and Enzymatic Saccharification in Interspecific Corymbia Hybrids and Parental Taxa

scientific article

Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.

scientific article published on 12 June 2019

Evaluation of methods for the assessment of malting quality in barley breeding

Evaluation of plant biomass resources available for replacement of fossil oil

scientific article (publication date: April 2010)

Evolution of an intermediate C4 photosynthesis in the non-foliar tissues of the Poaceae

scientific article published on 01 June 2022

Exogenous putrescine attenuates the negative impact of drought stress by modulating physio-biochemical traits and gene expression in sugar beet (Beta vulgaris L.)

scientific article published in 2022

Exploring and Exploiting Pan-genomics for Crop Improvement

scientific article published on 28 December 2018

Fasciclin-like arabinogalactan protein gene expression is associated with yield of flour in the milling of wheat

scientific article published on 2 October 2017

Fragrance in rice (Oryza sativa) is associated with reduced yield under salt treatment

Functional cereals for production in new and variable climates

scientific article

Future prospects for plant genotyping

article

Gas chromatography-mass spectrometry and gas chromatography-tandem mass spectrometry of cyclic fatty acid monomers isolated from heated fats

scientific article published on 01 January 1991

Gelatinization temperature of rice explained by polymorphisms in starch synthase

scientific article published on 01 January 2006

Gene expression in the developing aleurone and starchy endosperm of wheat

scientific article published on 5 June 2012

Genes associated with the end of dormancy in grapes.

scientific article

Genetic Structure of Wild Germplasm of Macadamia: Species Assignment, Diversity and Phylogeographic Relationships

scientific article published on 03 June 2020

Genetic control of monoterpene composition in the essential oil of Melaleuca alternifolia (Cheel).

scientific article published on August 2002

Genetic maps for Pinus elliottii var. elliottii and P. caribaea var. hondurensis using AFLP and microsatellite markers

scientific article published on 08 February 2003

Genetics and Genomics of African Rice (Oryza glaberrima Steud) Domestication

scientific article published on 07 January 2021

Genome and transcriptome sequencing characterises the gene space of Macadamia integrifolia (Proteaceae)

scientific article

Genome diversity in wild grasses under environmental stress.

scientific article published on 15 December 2011

Genome-wide DNA polymorphisms in eliteindicarice inbreds discovered by whole-genome sequencing

scientific article published on 06 January 2012

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza.

scientific article

Genomics as a Tool for Cereal Chemistry

article

Genomics of crop wild relatives: expanding the gene pool for crop improvement

scientific article

Genomics strategies for germplasm characterization and the development of climate resilient crops

scientific article (publication date: 2014)

Genotyping by allele-specific PCR

Genotyping for rice eating qualities

Geographic variation in the essential oils and morphology of natural populations of Melaleuca alternifolia (Myrtaceae)

article published in 2002

Geographical and historical determinants of microsatellite variation in Eucalyptus pilularis

Global agricultural intensification during climate change: a role for genomics

scientific article published in April 2016

High-throughput prediction of eucalypt lignin syringyl/guaiacyl content using multivariate analysis: a comparison between mid-infrared, near-infrared, and Raman spectroscopies for model development

scientific article (publication date: 2014)

High-throughput sequencing and mutagenesis to accelerate the domestication of Microlaena stipoides as a new food crop

scientific article (publication date: 2013)

Highly sex specific gene expression in Jojoba

scientific article published in 2023

Identification and mapping of polymorphic SSR markers from expressed gene sequences of barley and wheat

Identification of new volatile thiols in the aroma ofVitis vinifera L. var. Sauvignon blanc wines

article by Takatoshi Tominaga et al published May 1998 in Flavour and Fragrance Journal

Identification of the creatine binding domain of creatine kinase by photoaffinity labeling

scientific article published on 01 September 1998

Identifying new volatile compounds in toasted oak

scientific article published on 01 April 1999

Inactivation of an aminoaldehyde dehydrogenase is responsible for fragrance in rice.

scientific article published on 13 August 2008

Influence of Gene Expression on Hardness in Wheat

scientific article

Interspecific amplification of tea tree (Melaleuca alternifolia-Myrtaceae) microsatellite loci-potential implications for conservation studies

article by M. Rossetto et al published 2000 in Australian Journal of Botany

Ion-pair high-performance liquid chromatography of bile salt conjugates: application to pig bile

scientific article published on 01 August 1991

Isolation of genes involved in secondary metabolism from Melaleuca alternifolia (Cheel) using expressed sequence tags (ESTs)

article

Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging

scientific article

Locked nucleic acids for optimizing displacement probes for quantitative real-time PCR

scientific article published on 15 November 2005

Long-read sequencing of the coffee bean transcriptome reveals the diversity of full-length transcripts.

scientific article published on 30 August 2017

Measurement of green fluorescent protein concentration in single cells by image analysis

scientific article published on November 2002

Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar content

scientific article published on 11 November 2020

Microsatellite analysis of genetic structure in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicenniaceae).

scientific article published in November 2000

Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to erianthus and sorghum

scientific article

Microsatellite variation and assessment of genetic structure in tea tree (Melaleuca alternifolia- Myrtaceae)

scientific article published on 01 April 1999

Modifying plants for biofuel and biomaterial production

scientific article

Molecular and Morphological Divergence of Australian Wild Rice

scientific article published on 10 February 2020

Molecular cloning and characterization of a novel bi-functional α-amylase/subtilisin inhibitor from Hevea brasiliensis.

scientific article published on 26 January 2016

Molecular relationships between Australian annual wild rice, Oryza meridionalis, and two related perennial forms.

scientific article published on 28 October 2013

Molecular structures and properties of starches of Australian wild rice

scientific article published on 19 May 2017

Mutation screening

N-dibenzylphospho-N'-3-(2,6-dichlorophenyl)propyl-guanidine is a bisubstrate-analog for creatine kinase.

scientific article published in September 1997

Nanotechnology: the future of cost-effective plant genotyping

article

Natural variation in the essential oil content of Melaleuca alternifolia Cheel (Myrtaceae)

scientific article published on 01 April 2000

New evidence for grain specific C4 photosynthesis in wheat

scientific article

New tools for single nucleotide polymorphism (SNP) discovery and analysis accelerating plant biotechnology

article

Next-Generation Technologies to Determine Plastid Genome Sequences

scientific article published on 01 January 2014

Next-generation sequencing for understanding and accelerating crop domestication.

scientific article published on 23 October 2011

Nuclear ribosomal pseudogenes resolve a corroborated monophyly of the eucalypt genus Corymbia despite misleading hypotheses at functional ITS paralogs

scientific article published on 6 May 2007

Origin and evolution of qingke barley in Tibet

scientific article published in Nature Communications

PCR-based molecular markers for the fragrance gene in rice (Oryza sativa. L.)

article

Pathways of Photosynthesis in Non-Leaf Tissues

scientific article published on 02 December 2020

Pectin Methylesterase genes influence solid wood properties of Eucalyptus pilularis

article

Phylogeny and Molecular Evolution of miR820 and miR396 microRNA Families in Oryza AA Genomes

scholarly article by Amit Kumar Singh et al published 26 December 2017 in Tropical Plant Biology

Plant DNA barcoding: from gene to genome.

scientific article published on 26 March 2014

Pollen flow in Eucalyptus grandis determined by paternity analysis using microsatellite markers

article

Polymorphisms in the α-amy1 gene of wild and cultivated barley revealed by the polymerase chain reaction

scientific article published on 01 October 1994

Preface: advances in DNA sequencing accelerating plant biotechnology

article

Prospects of breeding high-quality rice using post-genomic tools

scientific article published on 21 May 2015

Protocol: a simple method for extracting next-generation sequencing quality genomic DNA from recalcitrant plant species

scientific article

Publisher Correction: Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

scholarly article published in Nature Genetics

Random amplified polymorphic DNA (RAPD) detection of dwarf off-types in micropropagated Cavendish (Musa spp. AAA) bananas

scientific article published on 01 November 1996

Rare SNP discovery with endonucleases

Re-sequencing Resources to Improve Starch and Grain Quality in Rice

Relationship between sugarcane culm and leaf biomass composition and saccharification efficiency

scientific article published on 17 October 2019

Relationships between Iraqi Rice Varieties at the Nuclear and Plastid Genome Levels

scientific article published on 07 November 2019

Relationships of wild and domesticated rices (Oryza AA genome species) based upon whole chloroplast genome sequences

scientific article

Robust allele-specific polymerase chain reaction markers developed for single nucleotide polymorphisms in expressed barley sequences

scientific article published on 19 November 2005

Role of genomics in promoting the utilization of plant genetic resources in genebanks.

scientific article

Roles of GBSSI and SSIIa in determining amylose fine structure

scientific article published on 4 April 2015

SAGE of the developing wheat caryopsis

scientific article

SNP discovery in plants

article

SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids

scientific article

SNP in starch biosynthesis genes associated with nutritional and functional properties of rice.

scientific article

Segregation Distortion Observed in the Progeny of Crosses Between Oryza sativa and O. meridionalis Caused by Abortion During Seed Development

scientific article published on 08 October 2019

Sensitivity of random amplified polymorphic DNA analysis to detect genetic change in sugarcane during tissue culture

article

Sequence Variants Linked to Key Traits in Interspecific Crosses between African and Asian Rice

scientific article published on 26 November 2020

Sequence polymorphisms in the flanking regions of microsatellite markers

Sequencing of Australian wild rice genomes reveals ancestral relationships with domesticated rice

scientific article

Sequencing of bulks of segregants allows dissection of genetic control of amylose content in rice.

scientific article published on 12 May 2017

Single-nucleotide polymorphism detection in plants using a single-stranded pyrosequencing protocol with a universal biotinylated primer

article

Snp discovery by ecotilling using capillary electrophoresis

Sorghum

article

Structural and chemical characterization of hardwood from tree species with applications as bioenergy feedstocks

scientific article

Sugarcane microsatellites for the assessment of genetic diversity in sugarcane germplasm

scientific article published in 2003

Supporting in situ conservation of the genetic diversity of crop wild relatives using genomic technologies

scientific article published in 2022

Sustainable Utilization of TCM Resources

scientific article

Synthesis and differential properties of creatine analogues as inhibitors for human creatine kinase isoenzymes

scientific article published on 01 June 1996

THE GENOMICS OF FRUIT QUALITY

Target prediction of candidate miRNAs from Oryza sativa for silencing the RYMV genome

scientific article published on 13 September 2019

Targeted single nucleotide polymorphism (SNP) discovery in a highly polyploid plant species using 454 sequencing.

scientific article published in May 2009

The Fusarium crown rot pathogen Fusarium pseudograminearum triggers a suite of transcriptional and metabolic changes in bread wheat (Triticum aestivum L.).

scientific article published on 10 December 2016

The Nagoya Protocol and historical collections of plants

scientific article published on 01 May 2020

The biosynthesis, structure and gelatinization properties of starches from wild and cultivated African rice species (Oryza barthii and Oryza glaberrima).

scientific article published on 4 May 2015

The coffee bean transcriptome explains the accumulation of the major bean components through ripening

scientific article published in Scientific Reports

The coffee genome provides insight into the convergent evolution of caffeine biosynthesis.

scientific article

The defence-associated transcriptome of hexaploid wheat displays homoeolog expression and induction bias

scientific article published on 13 October 2016

The effect of salt on betaine aldehyde dehydrogenase transcript levels and 2-acetyl-1-pyrroline concentration in fragrant and non-fragrant rice (Oryza sativa)

scientific article published in 2008

The gene for fragrance in rice

article

The new use of Sorghum bicolor-derived SSR markers to evaluate genetic diversity in 17 Australian Sorghum species

article

The promoter of the asi gene directs expression in the maternal tissues of the seed in transgenic barley

scientific article published in July 2003

The role of plant biotechnology in bio-energy production

article

The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

scientific article published on 11 October 2017

The use of bulk segregant analysis to identify a RAPD marker linked to leaf rust resistance in barley.

scientific article published in July 1995

The use of microsatellite polymorphisms for the identification of Australian breeding lines of rice (Oryza sativa L.)

scholarly article

The wheat Em promoter drives reporter gene expression in embryo and aleurone tissue of transgenic barley and rice

scientific article published in July 2005

Thirty-three years of 2-acetyl-1-pyrroline, a principal basmati aroma compound in scented rice (Oryza sativa L.): a status review

scientific article

Towards universal loci for plant genotyping

article

Transcript profiles of wild and domesticated sorghum under water-stressed conditions and the differential impact on dhurrin metabolism

scientific article published on 27 January 2022

Transcriptome analysis highlights key differentially expressed genes involved in cellulose and lignin biosynthesis of sugarcane genotypes varying in fiber content

scientific article published in Scientific Reports

Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat

scientific article

Transcriptome changes in the developing sugarcane culm associated with high yield and early-season high sugar content

scientific article published on 27 February 2022

Transpecific microsatellites for hard pines

scientific article published in April 2002

Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice production

scientific article published on 14 October 2020

Use of DNA from dry leaves for PCR and RAPD analysis

article

Use of a draft genome of coffee (Coffea arabica) to identify SNPs associated with caffeine content.

scientific article published on 6 March 2018

Variation in amylose fine structure of starches from different botanical sources.

scientific article

Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots

scientific article published on 09 December 2020

Wheat Genomics for Grain Quality Improvement

Wheat seed transcriptome reveals genes controlling key traits for human preference and crop adaptation

article

Whole grain morphology of Australian rice species

article

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