List of works - Diego Bonatto

A network flow approach to predict protein targets and flavonoid backbones to treat respiratory syncytial virus infection.

scientific article

A systems biology analysis of protein-protein interactions between yeast superoxide dismutases and DNA repair pathways.

scientific article published on 16 May 2007

A systems pharmacology analysis of major chemotherapy combination regimens used in gastric cancer treatment: predicting potential new protein targets and drugs

scientific article published in September 2011

ATP-dependent chromatin remodeling and histone acetyltransferases in 5-FU cytotoxicity in Saccharomyces cerevisiae.

scientific article published on 26 April 2013

Aging as a consequence of intracellular water volume and density

scientific article published on 07 September 2011

Aging defined by a chronologic-replicative protein network in Saccharomyces cerevisiae: an interactome analysis.

scientific article published on 9 May 2009

Antioxidant activity and phenolic and mineral content of rose grape juice

scientific article

Antioxidant protection of resveratrol and catechin in Saccharomyces cerevisiae

scientific article published on 20 May 2008

Biocontainment Techniques and Applications for Yeast Biotechnology ⬇️

scientific article published on 29 March 2023

Combining small molecules for cell reprogramming through an interatomic analysis.

scientific article

Comparative study of the protein profiles of Sunki mandarin and Rangpur lime plants in response to water deficit

scientific article published on 3 March 2015

Cross-talk between redox regulation and the ubiquitin-proteasome system in mammalian cell differentiation.

scientific article

Detecting fluoride using a plant species as a bioindicator, evaluating the relationship of endocrine and nerve ganglia in small intestine function, and discovering the effects of protein malnourishment and probiotic supplementation in the digestive

scientific article published on 01 September 2012

Development and aging: two opposite but complementary phenomena

scientific article

Diauxic shift-induced stress resistance against hydroperoxides in Saccharomyces cerevisiae is not an adaptive stress response and does not depend on functional mitochondria

scientific article published in May 2001

Evaluation of cytotoxic and cytostatic effects in Saccharomyces cerevisiae by poissoner quantitative drop test

scientific article published in January 2009

Evaluation of heavy metal toxicity in eukaryotes using a simple functional assay.

scientific article

Fetal alcohol syndrome, chemo-biology and OMICS: ethanol effects on vitamin metabolism during neurodevelopment as measured by systems biology analysis

scientific article

Horizontal gene transfer building prokaryote genomes: genes related to exchange between cell and environment are frequently transferred ⬇️

scholarly article

Importance of the trans-sulfuration pathway in cancer prevention and promotion.

scientific article published on 16 December 2006

In silico analyses of Fsf1 sequences, a new group of fungal proteins orthologous to the metazoan sideroblastic anemia-related sideroflexin family

scientific article published on 16 December 2006

In silico analyses of a new group of fungal and plant RecQ4-homologous proteins.

scientific article published on 11 July 2008

In silico identification and analysis of new Artemis/Artemis-like sequences from fungal and metazoan species

scientific article published in August 2005

In silico identification of a new group of specific bacterial and fungal nitroreductases-like proteins.

scientific article

Influence of transcriptional variants on metastasis

scientific article published on 24 July 2018

Inhibition of HDAC increases the senescence induced by natural polyphenols in glioma cells

scientific article

Low cytotoxicity of ecteinascidin 743 in yeast lacking the major endonucleolytic enzymes of base and nucleotide excision repair pathways

scientific article published in July 2005

Mesenchymal stromal cells from unconventional model organisms

scientific article published on 08 October 2013

Mineral content is related to antioxidant and antimutagenic properties of grape juice

scientific article published on 03 September 2012

Molecular characterization of propolis-induced cell death in Saccharomyces cerevisiae.

scientific article published on 30 December 2010

New features on Pso2 protein family in DNA interstrand cross-link repair and in the maintenance of genomic integrity in Saccharomyces cerevisiae

scientific article

New insights into the Ca2+-ATPases that contribute to cadmium tolerance in yeast

Overview of xeroderma pigmentosum proteins architecture, mutations and post-translational modifications.

scientific article

Phenolic content and antioxidant activities of white and purple juices manufactured with organically- or conventionally-produced grapes

scientific article published on 28 June 2007

Polyhydroxyalkanoates production by actinobacteria isolated from soil

scientific article published in July 2009

Protein disulfide isomerase is required for platelet-derived growth factor-induced vascular smooth muscle cell migration, Nox1 NADPH oxidase expression, and RhoGTPase activation.

scientific article published on 6 July 2012

Psoralen-sensitive mutant pso9-1 of Saccharomyces cerevisiae contains a mutant allele of the DNA damage checkpoint gene MEC3.

scientific article

Relationship between endoplasmic reticulum- and Golgi-associated calcium homeostasis and 4-NQO-induced DNA repair in Saccharomyces cerevisiae

scientific article published on 9 February 2010

Relationships among carbohydrate intermediate metabolites and DNA damage and repair in yeast from a systems biology perspective

scientific article published on 24 April 2008

Role of PSO genes in repair of DNA damage of Saccharomyces cerevisiae

scientific article published on November 2003

Sak1 kinase interacts with Pso2 nuclease in response to DNA damage induced by interstrand crosslink-inducing agents in Saccharomyces cerevisiae.

scientific article

The Pmr1 protein, the major yeast Ca2+-ATPase in the Golgi, regulates intracellular levels of the cadmium ion

scientific article published on 28 May 2008

The developmental aging and origins of health and disease hypotheses explained by different protein networks.

scientific article published on 5 March 2011

The eukaryotic Pso2p/Snm1p family revisited: in silico analyses of Pso2p A, B and Plasmodium groups

scientific article published on 11 November 2005

The function of Alr1p of Saccharomyces cerevisiae in cadmium detoxification: insights from phylogenetic studies and particle-induced X-ray emission.

scientific article published in February 2005

The importance of sphingolipids and reactive oxygen species in cardiovascular development.

scientific article published on 28 April 2014

The role of the yeast ATP-binding cassette Ycf1p in glutathione and cadmium ion homeostasis during respiratory metabolism.

scientific article published on 29 May 2008

Toxicological effects of the different substances in tobacco smoke on human embryonic development by a systems chemo-biology approach

scientific article

Transcriptional profiling of Brazilian Saccharomyces cerevisiae strains selected for semi-continuous fermentation of sugarcane must.

scientific article published on 20 February 2013

Transcriptomics and systems biology analysis in identification of specific pathways involved in cacao resistance and susceptibility to witches' broom disease.

scientific article published on 28 February 2012

List of works by Diego Bonatto

A network flow approach to predict protein targets and flavonoid backbones to treat respiratory syncytial virus infection.

A systems biology analysis of protein-protein interactions between yeast superoxide dismutases and DNA repair pathways.

A systems pharmacology analysis of major chemotherapy combination regimens used in gastric cancer treatment: predicting potential new protein targets and drugs

ATP-dependent chromatin remodeling and histone acetyltransferases in 5-FU cytotoxicity in Saccharomyces cerevisiae.

Aging as a consequence of intracellular water volume and density

Aging defined by a chronologic-replicative protein network in Saccharomyces cerevisiae: an interactome analysis.

Antioxidant activity and phenolic and mineral content of rose grape juice

Antioxidant protection of resveratrol and catechin in Saccharomyces cerevisiae

Biocontainment Techniques and Applications for Yeast Biotechnology ⬇️

Combining small molecules for cell reprogramming through an interatomic analysis.

Comparative study of the protein profiles of Sunki mandarin and Rangpur lime plants in response to water deficit

Cross-talk between redox regulation and the ubiquitin-proteasome system in mammalian cell differentiation.

Detecting fluoride using a plant species as a bioindicator, evaluating the relationship of endocrine and nerve ganglia in small intestine function, and discovering the effects of protein malnourishment and probiotic supplementation in the digestive

Development and aging: two opposite but complementary phenomena

Diauxic shift-induced stress resistance against hydroperoxides in Saccharomyces cerevisiae is not an adaptive stress response and does not depend on functional mitochondria

Evaluation of cytotoxic and cytostatic effects in Saccharomyces cerevisiae by poissoner quantitative drop test

Evaluation of heavy metal toxicity in eukaryotes using a simple functional assay.

Fetal alcohol syndrome, chemo-biology and OMICS: ethanol effects on vitamin metabolism during neurodevelopment as measured by systems biology analysis

Horizontal gene transfer building prokaryote genomes: genes related to exchange between cell and environment are frequently transferred ⬇️

Importance of the trans-sulfuration pathway in cancer prevention and promotion.

In silico analyses of Fsf1 sequences, a new group of fungal proteins orthologous to the metazoan sideroblastic anemia-related sideroflexin family

In silico analyses of a new group of fungal and plant RecQ4-homologous proteins.

In silico identification and analysis of new Artemis/Artemis-like sequences from fungal and metazoan species

In silico identification of a new group of specific bacterial and fungal nitroreductases-like proteins.

Influence of transcriptional variants on metastasis

Inhibition of HDAC increases the senescence induced by natural polyphenols in glioma cells

Low cytotoxicity of ecteinascidin 743 in yeast lacking the major endonucleolytic enzymes of base and nucleotide excision repair pathways

Mesenchymal stromal cells from unconventional model organisms

Mineral content is related to antioxidant and antimutagenic properties of grape juice

Molecular characterization of propolis-induced cell death in Saccharomyces cerevisiae.

New features on Pso2 protein family in DNA interstrand cross-link repair and in the maintenance of genomic integrity in Saccharomyces cerevisiae

New insights into the Ca2+-ATPases that contribute to cadmium tolerance in yeast

Overview of xeroderma pigmentosum proteins architecture, mutations and post-translational modifications.

Phenolic content and antioxidant activities of white and purple juices manufactured with organically- or conventionally-produced grapes

Polyhydroxyalkanoates production by actinobacteria isolated from soil

Protein disulfide isomerase is required for platelet-derived growth factor-induced vascular smooth muscle cell migration, Nox1 NADPH oxidase expression, and RhoGTPase activation.

Psoralen-sensitive mutant pso9-1 of Saccharomyces cerevisiae contains a mutant allele of the DNA damage checkpoint gene MEC3.

Relationship between endoplasmic reticulum- and Golgi-associated calcium homeostasis and 4-NQO-induced DNA repair in Saccharomyces cerevisiae

Relationships among carbohydrate intermediate metabolites and DNA damage and repair in yeast from a systems biology perspective

Role of PSO genes in repair of DNA damage of Saccharomyces cerevisiae

Sak1 kinase interacts with Pso2 nuclease in response to DNA damage induced by interstrand crosslink-inducing agents in Saccharomyces cerevisiae.

The Pmr1 protein, the major yeast Ca2+-ATPase in the Golgi, regulates intracellular levels of the cadmium ion

The developmental aging and origins of health and disease hypotheses explained by different protein networks.

The eukaryotic Pso2p/Snm1p family revisited: in silico analyses of Pso2p A, B and Plasmodium groups

The function of Alr1p of Saccharomyces cerevisiae in cadmium detoxification: insights from phylogenetic studies and particle-induced X-ray emission.

The importance of sphingolipids and reactive oxygen species in cardiovascular development.

The role of the yeast ATP-binding cassette Ycf1p in glutathione and cadmium ion homeostasis during respiratory metabolism.

Toxicological effects of the different substances in tobacco smoke on human embryonic development by a systems chemo-biology approach

Transcriptional profiling of Brazilian Saccharomyces cerevisiae strains selected for semi-continuous fermentation of sugarcane must.

Transcriptomics and systems biology analysis in identification of specific pathways involved in cacao resistance and susceptibility to witches' broom disease.