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List of works by Romain Koszul

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Genome evolution in yeasts

scientific article
Total synthesis of a functional designer eukaryotic chromosome.

scientific article
Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga

scientific article
Segmental duplications arise from Pol32-dependent repair of broken forks through two alternative replication-based mechanisms

scientific article
Meiotic chromosomes move by linkage to dynamic actin cables with transduction of force through the nuclear envelope

scientific article published on June 2008
Eucaryotic genome evolution through the spontaneous duplication of large chromosomal segments

scientific article
Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging.

scientific article published in August 2015
Dynamic chromosome movements during meiosis: a way to eliminate unwanted connections?

scientific article
A Predictive Computational Model of the Dynamic 3D Interphase Yeast Nucleus

article
Normalization of a chromosomal contact map.

scientific article
Csm4, in collaboration with Ndj1, mediates telomere-led chromosome dynamics and recombination during yeast meiosis

scientific article
High-quality genome (re)assembly using chromosomal contact data

scientific article
Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms

scientific article
Deep functional analysis of synII, a 770-kilobase synthetic yeast chromosome

scientific article published on March 2017
A checkpoint control orchestrates the replication of the two chromosomes of Vibrio cholerae

scientific article
Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins.

scientific article published on 10 January 2018
The complete mitochondrial genome sequence of the pathogenic yeast Candida (Torulopsis) glabrata

scientific article published on January 2003
3D organization of synthetic and scrambled chromosomes.

scientific article published in March 2017
Evidence for a dual role of actin in regulating chromosome organization and dynamics in yeast

scientific article published on 13 January 2016
Spatial reorganization of telomeres in long-lived quiescent cells

scientific article
The 3D folding of metazoan genomes correlates with the association of similar repetitive elements

scientific article published on 24 November 2015
Stability of large segmental duplications in the yeast genome

scientific article
Scaffolding bacterial genomes and probing host-virus interactions in gut microbiome by proximity ligation (chromosome capture) assay

scientific article published on 17 February 2017
Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle

scientific article published on 20 July 2017
Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae

scientific article
Filling annotation gaps in yeast genomes using genome-wide contact maps

scientific article
Contact genomics: scaffolding and phasing (meta)genomes using chromosome 3D physical signatures

scientific article
A prominent role for segmental duplications in modeling eukaryotic genomes

scientific article published on 02 December 2008
Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi-C.

scientific article published on 16 July 2018
Gateway to genetic exchange? DNA double-strand breaks in the bdelloid rotifer Adineta vaga submitted to desiccation

scientific article
Dynamic Processing of Displacement Loops during Recombinational DNA Repair

scientific article published on 05 February 2019
Proximity ligation scaffolding and comparison of two Trichoderma reesei strains genomes

scientific article
Metagenome Analysis Exploiting High-Throughput Chromosome Conformation Capture (3C) Data

scientific article published on November 19, 2015
The centenary of Janssens's chiasmatype theory

scientific article
Purification of G1 daughter cells from different Saccharomycetes species through an optimized centrifugal elutriation procedure

scientific article published on 26 March 2014
Generation and Analysis of Chromosomal Contact Maps of Yeast Species

scientific article published on January 2016
The chiasmatype theory. A new interpretation of the maturation divisions. 1909.

scientific article
Regulation of Cohesin-Mediated Chromosome Folding by Eco1 and Other Partners

scientific article published on 06 February 2020
Real-time imaging of meiotic chromosomes in Saccharomyces cerevisiae

scientific article published on January 2009
Genome-wide replication landscape of Candida glabrata

scientific article published on 2 September 2015
Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin

scientific article published in Nature Communications
Kinetic Signature of Cooperativity in the Irreversible Collapse of a Polymer

scientific article published in Physical Review Letters
A Proximity Ligation-Based Method for Quantitative Measurement of D-Loop Extension in S. cerevisiae

Generation of a Metagenomics Proximity Ligation 3C Library of a Mammalian Gut Microbiota

scientific article published on 18 September 2018
Condensin-Mediated Chromosome Folding and Internal Telomeres Drive Dicentric Severing by Cytokinesis

scientific article published on 13 June 2019
Beyond the bounds of evolution: Synthetic chromosomes… How and what for?

scientific article
instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder

scientific article published on 18 June 2020
Filling the gap: Micro-C accesses the nucleosomal fiber at 100-1000 bp resolution

scientific article published on 21 August 2015
FACT mediates cohesin function on chromatin

scientific article published on 03 October 2019
MetaTOR: A Computational Pipeline to Recover High-Quality Metagenomic Bins From Mammalian Gut Proximity-Ligation (meta3C) Libraries

scientific article published on 20 August 2019

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