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List of works by Bart C. Weimer

100K Pathogen Genome Project

scientific article published on 13 July 2017

100K Pathogen Genome Project: 306 Listeria Draft Genome Sequences for Food Safety and Public Health

scientific article published on 9 February 2017

A Syst-OMICS Approach to Ensuring Food Safety and Reducing the Economic Burden of Salmonellosis.

scientific article

A novel approach to identify bovine sperm membrane proteins that interact with receptors on the vitelline membrane of bovine oocytes

scientific article published in April 2008

Amylases and Their Importance during Glycan Degradation: Genome Sequence Release of Salmonella Amylase Knockout Strains.

scientific article published on 18 May 2017

Analyses of publicly available <i>Hungatella hathewayi</i> genomes revealed genetic distances indicating they belong to more than one species

scientific article published on 01 December 2021

Analytical methodologies for broad metabolite coverage of exhaled breath condensate

scientific article published on 27 June 2017

Assessment Impacts of Ozone on Salmonella Typhimurium and Escherichia coli O157:H7 in Liquid Dairy Waste

scientific article published in 2022

Automation of PacBio SMRTbell NGS library preparation for bacterial genome sequencing

scientific article published on 23 March 2017

Bacteroides in the infant gut consume milk oligosaccharides via mucus-utilization pathways

scientific article published on 27 October 2011

Biodiversity in microbial communities: system scale patterns and mechanisms

scientific article

Broad conservation of milk utilization genes in Bifidobacterium longum subsp. infantis as revealed by comparative genomic hybridization.

scientific article

CESA TRAFFICKING INHIBITOR inhibits cellulose deposition and interferes with the trafficking of cellulose synthase complexes and their associated proteins KORRIGAN1 and POM2/CELLULOSE SYNTHASE INTERACTIVE PROTEIN1.

scientific article published on 22 December 2014

Carbohydrate starvation causes a metabolically active but nonculturable state in Lactococcus lactis

scientific article published on 9 February 2007

Comparative Genomics Reveals the Diversity of Restriction-Modification Systems and DNA Methylation Sites in Listeria monocytogenes

scientific article published on 11 November 2016

Comparative analysis of Campylobacter isolates from wild birds and chickens using MALDI-TOF MS, biochemical testing, and DNA sequencing.

scientific article

Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth

scientific article

Comparative genomics of the lactic acid bacteria

scientific article

Complete Genome Sequences of a Clinical Isolate and an Environmental Isolate of Vibrio parahaemolyticus.

scientific article

Consumption of lysozyme-rich milk can alter microbial fecal populations.

scientific article

Contribution of impaired myocardial insulin signaling to mitochondrial dysfunction and oxidative stress in the heart.

scientific article published on 23 February 2009

Cross-talk between E. coli strains and a human colorectal adenocarcinoma-derived cell line

scientific article published on 04 December 2013

Cytosporone B is an agonist for nuclear orphan receptor Nur77.

scientific article

DNA Macroarray profiling of Lactococcus lactis subsp. lactis IL1403 gene expression during environmental stresses.

scientific article published on November 2004

Development of larval Schistosoma japonicum blocked in Oncomelania hupensis by pre-infection with larval Exorchis sp.

scientific article published in December 2009

Diazotrophic bacteria from maize exhibit multifaceted plant growth promotion traits in multiple hosts

scientific article published on 14 September 2020

Diversity of sulfur compound production in lactic acid bacteria

scientific article published on 01 December 2000

Draft Genome Sequence of Bacillus velezensis CE2, Which Genetically Encodes a Novel Multicomponent Lantibiotic

Draft Genome Sequence of Multidrug-Resistant Abortive Campylobacter jejuni from Northern California

scientific article published on 13 April 2017

Draft Genome Sequences of 1,183 Salmonella Strains from the 100K Pathogen Genome Project.

scientific article published on 13 July 2017

Draft Genome Sequences of Campylobacter jejuni Strains That Cause Abortion in Livestock.

scientific article published on December 2016

Draft Genome Sequences of Salmonella Lysozyme Gene Knockout Mutants

scientific article published on 8 June 2017

Draft Genome Sequences of Salmonella enterica Serovar Typhimurium LT2 with Deleted Chitinases That Are Emerging Virulence Factors.

scientific article

Effect of temperature control on the metabolite content in exhaled breath condensate.

scientific article published on 30 December 2017

Enhanced cardiac Akt/protein kinase B signaling contributes to pathological cardiac hypertrophy in part by impairing mitochondrial function via transcriptional repression of mitochondrion-targeted nuclear genes.

scientific article

Enhanced non-invasive respiratory sampling from bottlenose dolphins for breath metabolomics measurements.

scientific article published on 30 September 2016

Exhaled breath condensate methods adapted from human studies using longitudinal metabolomics for predicting early health alterations in dolphins

scientific article

Exploring bacterial epigenomics in the next-generation sequencing era: a new approach for an emerging frontier

scientific article published on 08 April 2014

Fallacy of the Unique Genome: Sequence Diversity within Single Helicobacter pylori Strains

scientific article published on 21 February 2017

Fatty acid production from amino acids and alpha-keto acids by Brevibacterium linens BL2.

scientific article

Food authentication from shotgun sequencing reads with an application on high protein powders

scientific article published on 19 November 2019

Functional biogeography as evidence of gene transfer in hypersaline microbial communities

scientific article

Gastrointestinal microbes interact with canine adipose-derived mesenchymal stem cells in vitro and enhance immunomodulatory functions.

scientific article

Genetic loss of insulin receptors worsens cardiac efficiency in diabetes.

scientific article published on 9 February 2012

Genetic mechanisms underlying the pathogenicity of cold-stressed Salmonella enterica serovar typhimurium in cultured intestinal epithelial cells

scientific article published on 5 September 2014

Genomic Comparison of Campylobacter spp. and Their Potential for Zoonotic Transmission between Birds, Primates, and Livestock

scientific article published on 07 October 2016

Genomic characterization of a diazotrophic microbiota associated with maize aerial root mucilage

scientific article published on 28 September 2020

Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages

scientific article

Glycosylation of human milk lactoferrin exhibits dynamic changes during early lactation enhancing its role in pathogenic bacteria-host interactions

scientific article

Gut microbiota-produced succinate promotes C. difficile infection after antibiotic treatment or motility disturbance

scientific article published on December 2014

Human breath metabolomics using an optimized non-invasive exhaled breath condensate sampler.

scientific article published on 22 December 2016

Identification of Nitrogen Fixation Genes in <i>Lactococcus</i> Isolated from Maize Using Population Genomics and Machine Learning

scientific article published on 20 December 2020

Implication of Sialidases in Salmonella Infection: Genome Release of Sialidase Knockout Strains from Salmonella enterica Serovar Typhimurium LT2.

scientific article published on 11 May 2017

Influence of Host Ecology and Behavior on Campylobacter jejuni Prevalence and Environmental Contamination Risk in a Synanthropic Wild Bird Species.

scientific article published on 03 June 2016

Influence of a poly-ethylene glycol spacer on antigen capture by immobilized antibodies

scientific article published on 01 September 2000

Insulin receptor substrate signaling suppresses neonatal autophagy in the heart.

scientific article published on November 2013

Intraspecies variation in the emergence of hyperinfectious bacterial strains in nature

scientific article

Isolation and characterization of a protease from Pseudomonas fluorescens RO98

scientific article published on 01 August 2000

Isolation and characterization of acid- and bile-tolerant isolates from strains of Lactobacillus acidophilus

scientific article

Large-Scale Release of Campylobacter Draft Genomes: Resources for Food Safety and Public Health from the 100K Pathogen Genome Project

scientific article published on 5 January 2017

Metabolome searcher: a high throughput tool for metabolite identification and metabolic pathway mapping directly from mass spectrometry and using genome restriction

scientific article published on 25 February 2015

Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens

scientific article published on September 2013

Mycoepoxydiene, a fungal polyketide, induces cell cycle arrest at the G2/M phase and apoptosis in HeLa cells.

scientific article published on 25 September 2010

Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota

scientific article published on 7 August 2018

Pandemic dynamics of COVID-19 using epidemic stage, instantaneous reproductive number and pathogen genome identity (GENI) score: modeling molecular epidemiology

scientific article published on 20 March 2020

Preadaptation to cold stress in Salmonella enterica serovar Typhimurium increases survival during subsequent acid stress exposure

scientific article published on 20 September 2013

Prebiotic Oligosaccharides Potentiate Host Protective Responses against L. Monocytogenes Infection

scientific article published on 19 December 2017

Probiotic bacteria survive in Cheddar cheese and modify populations of other lactic acid bacteria

scientific article published on 17 March 2014

Prolonged drought imparts lasting compositional changes to the rice root microbiome

scientific article published on 22 July 2021

Proteomic remodelling of mitochondrial oxidative pathways in pressure overload-induced heart failure

scientific article published on 19 October 2009

Quantification of antibiotic resistance genes and mobile genetic in dairy manure

scientific article published on 23 December 2021

Role of aminotransferase IlvE in production of branched-chain fatty acids by Lactococcus lactis subsp. lactis.

scientific article published on January 2004

Salmonella Degrades the Host Glycocalyx Leading to Altered Infection and Glycan Remodeling

scientific article published on 08 July 2016

Salmonella Typhimurium Enzymatically Landscapes the Host Intestinal Epithelial Cell (IEC) Surface Glycome to Increase Invasion.

scientific article

Shigella Draft Genome Sequences: Resources for Food Safety and Public Health.

scientific article published on 20 April 2017

SigTree: A Microbial Community Analysis Tool to Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree

scientific article published on 6 July 2017

Specific integrin subunits in bovine oocytes, including novel sequences for alpha 6 and beta 3 subunits

scientific article published in May 2007

Study of biochemical pathways and enzymes involved in pyrene degradation by Mycobacterium sp. strain KMS.

scientific article

The Bacterial Mobile Resistome Transfer Network Connecting the Animal and Human Microbiomes

scientific article published on 09 September 2016

Tissue-specific remodeling of the mitochondrial proteome in type 1 diabetic akita mice.

scientific article published on 19 June 2009

Tryptophan catabolism in Brevibacterium linens as a potential cheese flavor adjunct.

scientific article published in August 2001

Whole Cell Cross-Linking to Discover Host-Microbe Protein Cognate Receptor/Ligand Pairs

scientific article published on 19 July 2018

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