Search filters

List of works by Willem van Schaik

<i>Enterobacteriaceae</i> and <i>Bacteroidaceae</i> provide resistance to travel-associated intestinal colonization by multi-drug resistant <i>Escherichia coli</i>

scientific article published in 2022

A LacI-family regulator activates maltodextrin metabolism of Enterococcus faecium ⬇️

scientific article

A genetic element present on megaplasmids allows Enterococcus faecium to use raffinose as carbon source.

scientific article published on 15 October 2010

A multiresistance megaplasmid pLG1 bearing a hylEfm genomic island in hospital Enterococcus faecium isolates

scientific article published on 15 October 2010

A pilot integrative analysis of colonic gene expression, gut microbiota and immune infiltration in primary sclerosing cholangitis-inflammatory bowel disease: association of disease with bile acid pathways

scientific article published on 04 February 2020

Antibiotic resistant enterococci-tales of a drug resistance gene trafficker

scientific article published on 08 March 2013

AsrR is an oxidative stress sensing regulator modulating Enterococcus faecium opportunistic traits, antimicrobial resistance, and pathogenicity.

scientific article

Challenges and opportunities for whole-genome sequencing-based surveillance of antibiotic resistance

scientific article

Characterization of Enterococcus Isolates Colonizing the Intestinal Tract of Intensive Care Unit Patients Receiving Selective Digestive Decontamination

scientific article published on 28 August 2017

CodY regulation is required for full virulence and heme iron acquisition in Bacillus anthracis

Comparative gut microbiota and resistome profiling of intensive care patients receiving selective digestive tract decontamination and healthy subjects

scientific article published on 14 August 2017

Complement resistance mechanisms of Klebsiella pneumoniae

scientific article

Conditionally essential genes for survival during starvation in Enterococcus faecium E745

scientific article published on 18 August 2020

Core Genome Multilocus Sequence Typing Scheme for High- Resolution Typing of Enterococcus faecium

scientific article

Deletions in a ribosomal protein-coding gene are associated with tigecycline resistance in Enterococcus faecium

scientific article published on 20 August 2015

Dissemination of cephalosporin resistance genes between Escherichia coli strains from farm animals and humans by specific plasmid lineages

scientific article (publication date: December 2014)

Do we really understand how faecal microbiota transplantation works?

scientific article published on 16 March 2019

Effects of early-life antibiotics on the developing infant gut microbiome and resistome: a randomized trial

scientific article published on 16 February 2022

Effects of selective digestive decontamination (SDD) on the gut resistome

scientific article

Emergence of epidemic multidrug-resistant Enterococcus faecium from animal and commensal strains

scientific article published on 20 August 2013

Enterococcus faecium genome dynamics during long-term asymptomatic patient gut colonization

scientific article published on 05 June 2019

Functional genomic analysis of bile salt resistance in Enterococcus faecium

scientific article

Genome-wide Screening Identifies Phosphotransferase System Permease BepA to Be Involved in Enterococcus faecium Endocarditis and Biofilm Formation

scientific article published on 16 March 2016

Genome-wide identification of ampicillin resistance determinants in Enterococcus faecium

scientific article

Genomic Characterization of Colistin Heteroresistance in Klebsiella pneumoniae during a Nosocomial Outbreak

scientific article published on 6 September 2016

Genomic transition of enterococci from gut commensals to leading causes of multidrug-resistant hospital infection in the antibiotic era

scientific article published on 5 February 2013

Global Emergence and Dissemination of Enterococci as Nosocomial Pathogens: Attack of the Clones?

scientific article

Harder, better, faster, stronger: Colistin resistance mechanisms in Escherichia coli

scientific article published on 07 January 2021

Hospital and community ampicillin-resistant Enterococcus faecium are evolutionarily closely linked but have diversified through niche adaptation

scientific article

IS element IS16 as a molecular screening tool to identify hospital-associated strains of Enterococcus faecium

scientific article

Identification of a genetic determinant in clinical Enterococcus faecium strains that contributes to intestinal colonization during antibiotic treatment

scientific article published on 27 February 2013

In-depth resistome analysis by targeted metagenomics.

scientific article

Investigating the mobilome in clinically important lineages of Enterococcus faecium and Enterococcus faecalis

scientific article published on 10 April 2015

Limited influence of hospital wastewater on the microbiome and resistome of wastewater in a community sewerage system

scientific article published on 01 July 2018

Loss of Antibiotic Tolerance in Sod-Deficient Mutants Is Dependent on the Energy Source and Arginine Catabolism in Enterococci.

scientific article published on 10 August 2015

Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions

scientific article published on 8 July 2015

On the (im)possibility of reconstructing plasmids from whole-genome short-read sequencing data

scientific article published on 18 August 2017

Prediction of the intestinal resistome by a three-dimensional structure-based method

scientific article published on 26 November 2018

RNA-seq and Tn-seq reveal fitness determinants of vancomycin-resistant Enterococcus faecium during growth in human serum

scientific article published on 21 November 2017

Rapid resistome mapping using nanopore sequencing

scientific article

Recent recombination events in the core genome are associated with adaptive evolution in Enterococcus faecium

scientific article published on January 2013

Restricted gene flow among hospital subpopulations of Enterococcus faecium.

scientific article

Tandem amplification of the vanM gene cluster drives vancomycin resistance in vancomycin-variable enterococci

scientific article published on 01 February 2020

The Enterococcus faecium enterococcal biofilm regulator, EbrB, regulates the esp operon and is implicated in biofilm formation and intestinal colonization

scientific article

The N-terminal domain of the thermo-regulated surface protein PrpA of Enterococcus faecium binds to fibrinogen, fibronectin and platelets.

scientific article published on 17 December 2015

The Two-Component System ChtRS Contributes to Chlorhexidine Tolerance in Enterococcus faecium

scientific article

The cell wall architecture of Enterococcus faecium: from resistance to pathogenesis.

scientific article published on August 2013

The human gut resistome

scientific article

The impact of host metapopulation structure on the population genetics of colonizing bacteria

scientific article

The recombinase IntA is required for excision of esp-containing ICEEfm1 in Enterococcus faecium.

scientific article published on 10 December 2010

Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis

scientific article published on October 2017

Paulina is supported by:

About Paulina

Help