List of works - Darren M. Wells

A biomechanical model of anther opening reveals the roles of dehydration and secondary thickening

scientific article published on 21 September 2012

A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.

scientific article published on 12 April 2018

A novel sensor to map auxin response and distribution at high spatio-temporal resolution

scientific article published on 15 January 2012

Active Vision and Surface Reconstruction for 3D Plant Shoot Modelling

scientific article published on 25 April 2019

Adding a Piece to the Leaf Epidermal Cell Shape Puzzle

scientific article published in November 2017

Author Correction: A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.

scientific article published on 2 May 2018

Auxin fluxes through plasmodesmata modify root-tip auxin distribution

scientific article published on 30 March 2020

Auxin regulates aquaporin function to facilitate lateral root emergence

article

Biosensors for phytohormone quantification: challenges, solutions, and opportunities

scientific article published on 4 January 2013

Branching out in roots: uncovering form, function, and regulation

scientific article published on 18 August 2014

CellSeT: novel software to extract and analyze structured networks of plant cells from confocal images

scientific article

Characterization of Pearl Millet Root Architecture and Anatomy Reveals Three Types of Lateral Roots

scientific article published on 13 June 2016

Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large-scale genetic studies.

scientific article published on October 2017

Deep Machine Learning provides state-of-the-art performance in image-based plant phenotyping

article

Deep machine learning provides state-of-the-art performance in image-based plant phenotyping ⬇️

scientific article published on October 2017

Dual expression and anatomy lines allow simultaneous visualization of gene expression and anatomy

scientific article published on 29 October 2021

Feeling UPBEAT about Growth: Linking ROS Gradients and Cell Proliferation

scientific article published on 01 November 2010

Finite element modelling of cell wall properties for onion epidermis using a fibre-reinforced hyperelastic model

scientific article published on 25 August 2010

From jellyfish to biosensors: the use of fluorescent proteins in plants

scientific article published on January 2013

Glutaredoxin regulation of primary root growth is associated with early drought stress tolerance in pearl millet

scientific article published in 2024

High-throughput feature counting and measurement of roots

scientific article published on 12 March 2011

Identification of nitrogen-dependent QTL and underlying genes for root system architecture in hexaploid wheat

article

Identifying biological landmarks using a novel cell measuring image analysis tool: Cell-o-Tape. ⬇️

scientific article

Imaging and quantitative methods for studying cytoskeletal rearrangements during root development and gravitropism

scientific article

Linear discriminant analysis reveals differences in root architecture in wheat seedlings related to nitrogen uptake efficiency.

scientific article published in October 2017

Low-Cost Automated Vectors and Modular Environmental Sensors for Plant Phenotyping

scientific article published on 11 June 2020

Mechanical modelling quantifies the functional importance of outer tissue layers during root elongation and bending.

scientific article

Mechanical properties of epidermal cells of whole living roots of Arabidopsis thaliana: An atomic force microscopy study

scientific article published on 21 February 2012

MicroFilament Analyzer, an image analysis tool for quantifying fibrillar orientation, reveals changes in microtubule organization during gravitropism

scientific article

Multi-omics analysis identifies genes mediating the extension of cell walls in the Arabidopsis thaliana root elongation zone. ⬇️

scientific article published on 20 February 2015

Nitrate transport and signalling.

scientific article published on 22 May 2007

Non-invasive hydrodynamic imaging in plant roots at cellular resolution

scientific article published in 2021

Phenotyping pipeline reveals major seedling root growth QTL in hexaploid wheat.

scientific article published on 4 March 2015

Plant Phenotyping: An Active Vision Cell for Three-Dimensional Plant Shoot Reconstruction

article

Positioning the Root Elongation Zone Is Saltatory and Receives Input from the Shoot

scientific article published on 24 June 2020

Quantification of Fluorescent Reporters in Plant Cells

article

Quiescent center initiation in the Arabidopsis lateral root primordia is dependent on the SCARECROW transcription factor.

scientific article

Recovering the dynamics of root growth and development using novel image acquisition and analysis methods

scientific article published in June 2012

Rice plants overexpressing OsEPF1 show reduced stomatal density and increased root cortical aerenchyma formation

article

Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism

scientific article published on 5 March 2012

Root hydrotropism is controlled via a cortex-specific growth mechanism

scientific article

RootNav 2.0: Deep learning for automatic navigation of complex plant root architectures

scientific article published on 01 November 2019

RootNav: navigating images of complex root architectures

scientific article

Sequential induction of auxin efflux and influx carriers regulates lateral root emergence

scientific article published on 22 October 2013

Shaping 3D Root System Architecture

scientific article published in September 2017

Systems analysis of auxin transport in the Arabidopsis root apex

scientific article

Systems approaches reveal that ABCB and PIN proteins mediate co-dependent auxin efflux

The auxin signalling network translates dynamic input into robust patterning at the shoot apex

scientific article

The circadian clock rephases during lateral root organ initiation in Arabidopsis thaliana ⬇️

scientific article published on 6 July 2015

Time-profiling fluorescent reporters in the Arabidopsis root

scientific article published in January 2014

Uncovering the hidden half of plants using new advances in root phenotyping

article

List of works by Darren M. Wells

A biomechanical model of anther opening reveals the roles of dehydration and secondary thickening

A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.

A novel sensor to map auxin response and distribution at high spatio-temporal resolution

Active Vision and Surface Reconstruction for 3D Plant Shoot Modelling

Adding a Piece to the Leaf Epidermal Cell Shape Puzzle

Author Correction: A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.

Auxin fluxes through plasmodesmata modify root-tip auxin distribution

Auxin regulates aquaporin function to facilitate lateral root emergence

Biosensors for phytohormone quantification: challenges, solutions, and opportunities

Branching out in roots: uncovering form, function, and regulation

CellSeT: novel software to extract and analyze structured networks of plant cells from confocal images

Characterization of Pearl Millet Root Architecture and Anatomy Reveals Three Types of Lateral Roots

Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large-scale genetic studies.

Deep Machine Learning provides state-of-the-art performance in image-based plant phenotyping

Deep machine learning provides state-of-the-art performance in image-based plant phenotyping ⬇️

Dual expression and anatomy lines allow simultaneous visualization of gene expression and anatomy

Feeling UPBEAT about Growth: Linking ROS Gradients and Cell Proliferation

Finite element modelling of cell wall properties for onion epidermis using a fibre-reinforced hyperelastic model

From jellyfish to biosensors: the use of fluorescent proteins in plants

Glutaredoxin regulation of primary root growth is associated with early drought stress tolerance in pearl millet

High-throughput feature counting and measurement of roots

Identification of nitrogen-dependent QTL and underlying genes for root system architecture in hexaploid wheat

Identifying biological landmarks using a novel cell measuring image analysis tool: Cell-o-Tape. ⬇️

Imaging and quantitative methods for studying cytoskeletal rearrangements during root development and gravitropism

Linear discriminant analysis reveals differences in root architecture in wheat seedlings related to nitrogen uptake efficiency.

Low-Cost Automated Vectors and Modular Environmental Sensors for Plant Phenotyping

Mechanical modelling quantifies the functional importance of outer tissue layers during root elongation and bending.

Mechanical properties of epidermal cells of whole living roots of Arabidopsis thaliana: An atomic force microscopy study

MicroFilament Analyzer, an image analysis tool for quantifying fibrillar orientation, reveals changes in microtubule organization during gravitropism

Multi-omics analysis identifies genes mediating the extension of cell walls in the Arabidopsis thaliana root elongation zone. ⬇️

Nitrate transport and signalling.

Non-invasive hydrodynamic imaging in plant roots at cellular resolution

Phenotyping pipeline reveals major seedling root growth QTL in hexaploid wheat.

Plant Phenotyping: An Active Vision Cell for Three-Dimensional Plant Shoot Reconstruction

Positioning the Root Elongation Zone Is Saltatory and Receives Input from the Shoot

Quantification of Fluorescent Reporters in Plant Cells

Quiescent center initiation in the Arabidopsis lateral root primordia is dependent on the SCARECROW transcription factor.

Recovering the dynamics of root growth and development using novel image acquisition and analysis methods

Rice plants overexpressing OsEPF1 show reduced stomatal density and increased root cortical aerenchyma formation

Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism

Root hydrotropism is controlled via a cortex-specific growth mechanism

RootNav 2.0: Deep learning for automatic navigation of complex plant root architectures

RootNav: navigating images of complex root architectures

Sequential induction of auxin efflux and influx carriers regulates lateral root emergence

Shaping 3D Root System Architecture

Systems analysis of auxin transport in the Arabidopsis root apex

Systems approaches reveal that ABCB and PIN proteins mediate co-dependent auxin efflux

The auxin signalling network translates dynamic input into robust patterning at the shoot apex

The circadian clock rephases during lateral root organ initiation in Arabidopsis thaliana ⬇️

Time-profiling fluorescent reporters in the Arabidopsis root

Uncovering the hidden half of plants using new advances in root phenotyping