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List of works by Eduardo Castro-Nallar

Altered Middle Ear Microbiome in Children With Chronic Otitis Media With Effusion and Respiratory Illnesses

scientific article published on 04 October 2019

Androgen receptor gene CAG and GGN repeat polymorphisms in Chilean men with primary severe spermatogenic failure

scientific article published on 8 April 2010

Arsenic Response of Three Altiplanic Exiguobacterium Strains With Different Tolerance Levels Against the Metalloid Species: A Proteomics Study

scientific article published on 26 September 2019

COVID-19 drug practices risk antimicrobial resistance evolution

scientific article published in April 2021

Clinical PathoScope: rapid alignment and filtration for accurate pathogen identification in clinical samples using unassembled sequencing data

scientific article

Comparative Genomics Analysis of a New Exiguobacterium Strain from Salar de Huasco Reveals a Repertoire of Stress-Related Genes and Arsenic Resistance.

scientific article published on 21 March 2017

Comparative genomic analysis of a new tellurite-resistant Psychrobacter strain isolated from the Antarctic Peninsula.

scientific article published on 19 February 2018

Complete genome sequence of the marine Rhodococcus sp. H-CA8f isolated from Comau fjord in Northern Patagonia, Chile

scientific article published on 15 February 2018

Composition, taxonomy and functional diversity of the oropharynx microbiome in individuals with schizophrenia and controls

scientific article

Concordance and discordance of sequence survey methods for molecular epidemiology

scientific article

Copper-induced increased expression of genes involved in photosynthesis, carotenoid synthesis and C assimilation in the marine alga Ulva compressa

article

Cyclic AMP Regulates Bacterial Persistence through Repression of the Oxidative Stress Response and SOS-Dependent DNA Repair in Uropathogenic Escherichia coli

scientific article published on 9 January 2018

DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants.

scientific article

Draft Genome Sequence of a Multi-Metal Resistant Bacterium Pseudomonas putida ATH-43 Isolated from Greenwich Island, Antarctica

scientific article

Draft Genome Sequences of Five Enterococcus Species Isolated from the Gut of Patients with Suspected Clostridium difficile Infection

scientific article published on 18 May 2017

Dual Transcriptomic Profiling of Host and Microbiota during Health and Disease in Pediatric Asthma

scientific article published on 30 June 2015

Evaluation of computational methods for human microbiome analysis using simulated data

scientific article published on 11 August 2020

Genetic diversity and molecular epidemiology of HIV transmission

article

Genome Sequence of Clostridium paraputrificum 373-A1 Isolated in Chile from a Patient Infected with Clostridium difficile

scientific article

Genome Sequence of Streptomyces sp. H-KF8, a Marine Actinobacterium Isolated from a Northern Chilean Patagonian Fjord

scientific article

Genome sequence of two members of the chloroaromatic-degrading MT community: Pseudomonas reinekei MT1 and Achromobacter xylosoxidans MT3.

scientific article

Genomic Analysis of 48 Bacteriophages

scientific article published on 19 July 2018

Genomic and Physiological Traits of the Marine Bacterium QD168 Isolated From Quintero Bay, Central Chile, Reveal a Robust Adaptive Response to Environmental Stressors

article

In-Depth Genomic and Phenotypic Characterization of the Antarctic Psychrotolerant Strain Pseudomonas sp. MPC6 Reveals Unique Metabolic Features, Plasticity, and Biotechnological Potential

scientific article published on 24 May 2019

Influence of Physical-Chemical Soil Parameters on Microbiota Composition and Diversity in a Deep Hyperarid Core of the Atacama Desert

scientific article published on 01 January 2021

Integrating microbial and host transcriptomics to characterize asthma-associated microbial communities

scientific article published on 16 August 2015

Living to the High Extreme: Unraveling the Composition, Structure, and Functional Insights of Bacterial Communities Thriving in the Arsenic-Rich Salar de Huasco Altiplanic Ecosystem

scientific article published on 30 June 2021

Marcus Leonardo Boyd

scientific article published on 26 May 2021

Metataxonomic and Metagenomic Approaches vs. Culture-Based Techniques for Clinical Pathology

scientific article published on 7 April 2016

Microbial sequence typing in the genomic era.

scientific article published on 21 September 2017

Molecular phylodynamics and protein modeling of infectious salmon anemia virus (ISAV).

scientific article

Multilocus Sequence Typing of Pathogens

Mutation and recombination in pathogen evolution: Relevance, methods and controversies.

scientific article published on 22 September 2017

Nasal Bacteriomes of Patients with Asthma and Allergic Rhinitis Show Unique Composition, Structure, Function and Interactions

scientific article published in 2023

PathoScope 2.0: a complete computational framework for strain identification in environmental or clinical sequencing samples

scientific article

Pathogen typing in the genomics era: MLST and the future of molecular epidemiology

scientific article published on 26 January 2013

Pathoscope: species identification and strain attribution with unassembled sequencing data

scientific article

Phage cluster relationships identified through single gene analysis.

scientific article

Population genomics and phylogeography of an Australian dairy factory derived lytic bacteriophage

scientific article published on 21 February 2012

Rapid sequence modification in the highly polymorphic region (HPR) of the hemagglutinin gene of the infectious salmon anaemia virus (ISAV) suggests intra-segmental template switching recombination

scientific article published on 21 September 2020

Redefining Healthy Urine: A Cross-Sectional Exploratory Metagenomic Study of People With and Without Bladder Dysfunction.

scientific article published on 22 January 2016

Rhodococcus comparative genomics reveals a phylogenomic-dependent non-ribosomal peptide synthetase distribution: insights into biosynthetic gene cluster connection to an orphan metabolite

scientific article published on 09 July 2021

Sequences of Endophytic Fungal and Bacterial Communities from Araucaria araucana [(Molina) K. Koch, 1869] in the Coastal and Andes Mountain Ranges, Chile

scientific article published on 02 July 2020

Single-molecule long-read 16S sequencing to characterize the lung microbiome from mechanically ventilated patients with suspected pneumonia

scientific article

The evolution of HIV: inferences using phylogenetics

scientific article published on 27 November 2011

The transcription factor SlyA from Salmonella Typhimurium regulates genes in response to hydrogen peroxide and sodium hypochlorite

scientific article published on 29 May 2018

Tracheal Microbiota in Patients With a Tracheostomy Before, During and After an Acute Respiratory Infection

scientific article published on 01 November 2018

Variability in Genomic and Virulent Properties of Porphyromonas gingivalis Strains Isolated From Healthy and Severe Chronic Periodontitis Individuals

scientific article published on 10 July 2019

Whole genome single-nucleotide variation profile-based phylogenetic tree building methods for analysis of viral, bacterial and human genomes

scientific article published on 12 June 2014

tat Exon 1 exhibits functional diversity during HIV-1 subtype C primary infection.

scientific article published on 13 March 2013

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