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List of works by John Ellis

30 years of parasitology research analysed by text mining

scientific article published on 01 September 2020

A Gene-Based Positive Selection Detection Approach to Identify Vaccine Candidates Using as a Test Case Protozoan Pathogen

article

A biochemical protocol for the differentiation of current genomospecies of Aeromonas.

scientific article published in June 1996

A case-controlled study of Dientamoeba fragilis infections in children

scientific article published on 27 April 2011

A guide to in silico vaccine discovery for eukaryotic pathogens

scientific article

A live vaccine against Neospora caninum abortions in cattle

scientific article published on 07 February 2015

A microscopic description and ultrastructural characterisation of Dientamoeba fragilis: an emerging cause of human enteric disease

scientific article published on 26 November 2011

A new subspecies of Trypanosoma cyclops found in the Australian terrestrial leech Chtonobdella bilineata

scholarly article published in 2021

A novel strategy for classifying the output from an in silico vaccine discovery pipeline for eukaryotic pathogens using machine learning algorithms

scientific article

A phylogenetic study of the Anopheles punctulatus group of malaria vectors comparing rDNA sequence alignments derived from the mitochondrial and nuclear small ribosomal subunits

scientific article

A previously unclassified trypanosomatid responsible for human cutaneous lesions in Martinique (French West Indies) is the most divergent member of the genus Leishmania ss

scientific article published on 01 January 2002

A review of Dientamoeba fragilis carriage in humans: several reasons why this organism should be considered in the diagnosis of gastrointestinal illness.

scientific article published on January 2011

A review of the clinical presentation of dientamoebiasis.

scientific article

A review of the infection, genetics, and evolution of Neospora caninum: from the past to the present.

scientific article published on 15 September 2012

A second generation multiplex PCR for typing strains of Neospora caninum using six DNA targets

scientific article published on 13 August 2009

A unique thioredoxin of the parasitic nematode Haemonchus contortus with glutaredoxin activity

scientific article

Activity of benzimidazoles against Dientamoeba fragilis (Trichomonadida, Monocercomonadidae) in vitro and correlation of beta-tubulin sequences as an indicator of resistance.

scientific article published on 25 August 2014

An empirical comparison of distance matrix techniques for estimating codon usage divergence.

scientific article

An outbreak of abortion in a dairy herd associated with Neospora caninum and bovine pestivirus infection

scientific article published on January 2004

Analysis of dinucleotide frequency and codon usage in the phylum Apicomplexa

scientific article published in April 1993

Angiostrongylus cantonensis: a review of its distribution, molecular biology and clinical significance as a human pathogen.

scientific article published on 26 May 2016

Annotating the 'hypothetical' in hypothetical proteins: In-silico analysis of uncharacterised proteins for the Apicomplexan parasite, Neospora caninum

scientific article published on 07 December 2018

Australian dingoes are definitive hosts of Neospora caninum.

scientific article

Autofluorescence of Toxoplasma gondii and Neospora caninum cysts in vitro

scientific article published in February 2005

Bulky Trichomonad Genomes: Encoding a Swiss Army Knife.

scientific article published on 13 June 2016

Changes in the messenger RNA population during sporulation of Eimeria maxima

scientific article published on 01 February 1991

Characterisation of a simple, highly repetitive DNA sequence from the parasite Leishmania donovani ⬇️

scientific article published on May 1, 1988

Characterisation of the first Australian isolate of Neospora caninum from cattle

scientific article published in October 2002

Characterization of an alpha tubulin gene sequence from Neospora caninum and Hammondia heydorni, and their comparison to homologous genes from Apicomplexa.

scientific article

Characterization of an outbred pregnant mouse model of Neospora caninum infection

scientific article published in August 2002

Clinical significance of enteric protozoa in the immunosuppressed human population.

scientific article

Cloning of a polymorphic DNA fragment from the genome of Leishmania donovani

scientific article published on May 1989

Codon usage and bias among individual genes of the coccidia and piroplasms

scientific article published on 01 September 1994

Comparison and Recommendations for Use of Dientamoeba fragilis Real-Time PCR Assays

scientific article published on 26 April 2019

Comparison of microscopy, culture, and conventional polymerase chain reaction for detection of blastocystis sp. in clinical stool samples.

scientific article

Comparison of microscopy, two xenic culture techniques, conventional and real-time PCR for the detection of Dientamoeba fragilis in clinical stool samples.

scientific article published on 14 February 2010

Comparison of the biological characteristics of two isolates of Neospora caninum

scientific article published in April 1999

Comparison of the large subunit ribosomal DNA ofNeosporaandToxoplasmaand development of a new genetic marker for their differentiation based on the D2 domain ⬇️

scientific article published on February 1, 1998

Comparison of the patterns of codon usage and bias between Brugia, Echinococcus, Onchocerca and Schistosoma species.

scientific article published on January 1995

Contribution of introns to the species diversity associated with the apicomplexan parasite, Neospora caninum

scientific article published on 03 January 2020

Control options for Neospora caninum infections in cattle--current state of knowledge

scientific article published in June 2002

Control options for Neospora caninum--is there anything new or are we going backwards?

scientific article published on 25 March 2014

Culture of Neospora caninum in the presence of a Mycoplasma Removal Agent results in the selection of a mutant population of tachyzoites

scientific article published on 01 June 2005

Current treatment options for Dientamoeba fragilis infections.

scientific article published on 03 September 2012

Cyst formation and faecal-oral transmission of Dientamoeba fragilis--the missing link in the life cycle of an emerging pathogen

scientific article

DNA polymerases of parasitic protozoa.

scientific article published on July 1994

DNA sequence analysis of the ribosomal DNA ITS2 region for the Anopheles punctulatus group of mosquitoes

scientific article published in August 1999

Description of Dientamoeba fragilis cyst and precystic forms from human samples

scientific article

Descriptive epidemiology of infectious gastrointestinal illnesses in Sydney, Australia, 2007-2010.

scientific article

Detection and characterization of DNA polymerase activity in Toxoplasma gondii

scientific article published on 01 August 1993

Detection and transmission of Dientamoeba fragilis from environmental and household samples.

scientific article

Detection of Dientamoeba fragilis in animal faeces using species specific real time PCR assay

scientific article published on 20 July 2016

Detection of Dientamoeba fragilis in fresh stool specimens using PCR.

scientific article published in January 2005

Detection of Neospora caninum DNA by the polymerase chain reaction

scientific article published in April 1996

Development of a genetically engineered vaccine against poultry coccidiosis

scientific article published on 01 December 1991

Development of a single tube nested polymerase chain reaction assay for the detection of Neospora caninum DNA

scientific article published on 01 October 1999

Dientamoeba fragilis as a cause of travelers' diarrhea: report of seven cases

scientific article published on 01 January 2007

Dientamoeba fragilis, the Neglected Trichomonad of the Human Bowel

scientific article published on July 2016

Differences between Leishmania (Leishmania) chagasi, L. (L.) infantum and L. (L.) donovani as shown by DNA fingerprinting ⬇️

scientific article published on October 1, 1991

Differential Gamma Interferon- and Tumor Necrosis Factor Alpha-Driven Cytokine Response Distinguishes Acute Infection of a Metatherian Host with Toxoplasma gondii and Neospora caninum.

scientific article published on 27 March 2017

Differential ecology of Anopheles punctulatus and three members of the Anopheles farauti complex of mosquitoes on Guadalcanal, Solomon Islands, identified by PCR-RFLP analysis

scientific article published in September 2000

Differentiation of Aeromonas genomospecies using random amplified polymorphic DNA polymerase chain reaction (RAPD-PCR)

scientific article published on 01 April 1996

Discovering a vaccine against neosporosis using computers: is it feasible?

scientific article published on 12 July 2014

Effects of sequence alignment on the phylogeny of Sarcocystis deduced from 18S rDNA sequences

scientific article published on 01 January 1995

Eimeria species which infect the chicken contain virus-like RNA molecules

scientific article published in October 1990

Eimeria species: studies using rRNA and rDNA probes

scientific article

Enhancing in silico protein-based vaccine discovery for eukaryotic pathogens using predicted peptide-MHC binding and peptide conservation scores.

scientific article

Entamoeba moshkovskii infections in Sydney, Australia

scientific article published on 24 October 2007

Enteric protozoa in the developed world: a public health perspective.

scientific article

Epidemiology and associated risk factors of giardiasis in a peri-urban setting in New South Wales Australia.

scientific article published on 28 September 2018

Epidemiology and geographical distribution of enteric protozoan infections in sydney, australia

scientific article

Evaluating high-throughput ab initio gene finders to discover proteins encoded in eukaryotic pathogen genomes missed by laboratory techniques

scientific article

Evaluation of multiplex tandem real-time PCR for detection of Cryptosporidium spp., Dientamoeba fragilis, Entamoeba histolytica, and Giardia intestinalis in clinical stool samples.

scientific article published on 3 November 2010

Evaluation of recombinant proteins of Neospora caninum as vaccine candidates (in a mouse model).

scientific article published on 2 October 2008

Evaluation of the EasyScreen Protozoan Detection Kit for the diagnosis of Entamoeba histolytica

scientific article published on 07 May 2019

Evaluation of the EasyScreen™ enteric parasite detection kit for the detection of Blastocystis spp., Cryptosporidium spp., Dientamoeba fragilis, Entamoeba complex, and Giardia intestinalis from clinical stool samples

scientific article published on 23 October 2013

Evidence for a neotropical origin of Leishmania

scientific article

Evolution of ruminant Sarcocystis (Sporozoa) parasites based on small subunit rDNA sequences

scientific article published in February 1999

Evolution of the genus Leishmania revealed by comparison of DNA and RNA polymerase gene sequences

scientific article published in November 1997

Evolutionary ARMS Race: Antimalarial Resistance Molecular Surveillance.

scientific article published on 23 January 2018

Evolutionary Insight into the Trypanosomatidae Using Alignment-Free Phylogenomics of the Kinetoplast

scientific article published on 18 September 2019

Extensive production of Neospora caninum tissue cysts in a carnivorous marsupial succumbing to experimental neosporosis

scientific article (publication date: 2 June 2011)

Gastrointestinal pathogen distribution in symptomatic children in Sydney, Australia.

scientific article published on 20 January 2013

Genetic diversity amongst isolates of Neospora caninum, and the development of a multiplex assay for the detection of distinct strains.

scientific article published on June 2009

Genome Wide Identification of Mutational Hotspots in the Apicomplexan Parasite Neospora caninum and the Implications for Virulence

scientific article published on 01 September 2018

Genomics and its impact on parasitology and the potential for development of new parasite control methods.

scientific article

Gorillas are a host for Dientamoeba fragilis: an update on the life cycle and host distribution.

scientific article

Hammondia heydorni from the Arabian mountain gazelle and red fox in Saudi Arabia

scientific article published on 01 June 2003

Hammondia heydorni oocysts in the faeces of a greyhound in New Zealand.

scientific article

Hammondia isolated from dogs and foxes are genetically distinct

scientific article published on 27 September 2005

Host transmission dynamics of first- and third-stage <i>Angiostrongylus cantonensis</i> larvae in <i>Bullastra lessoni</i>

scientific article published in 2022

Importance of nonenteric protozoan infections in immunocompromised people.

scientific article

Improving the gene structure annotation of the apicomplexan parasite Neospora caninum fulfils a vital requirement towards an in silico-derived vaccine.

scientific article published on 4 March 2015

In Vitro Antimicrobial Susceptibility Patterns of Blastocystis

scientific article

In vitro induction of Neospora caninum bradyzoites in vero cells reveals differential antigen expression, localization, and host-cell recognition of tachyzoites and bradyzoites

scientific article published in January 2004

In vitro susceptibility testing of Dientamoeba fragilis.

scientific article published on 24 October 2011

Influenza A HA's conserved epitopes and broadly neutralizing antibodies: a prediction method

scientific article

Irritable bowel syndrome: a review on the role of intestinal protozoa and the importance of their detection and diagnosis.

scientific article

Isolation of Neospora caninum genes detected during a chronic murine infection.

scientific article

Isolation of Novel Trypanosomatid, Zelonia australiensis sp. nov. (Kinetoplastida: Trypanosomatidae) Provides Support for a Gondwanan Origin of Dixenous Parasitism in the Leishmaniinae

scientific article (publication date: 2017)

Isolation of Toxoplasma gondii from the brain of a dog in Australia and its biological and molecular characterization

scientific article published on 23 May 2009

Isolation, characterization and expression of a GRA2 homologue from Neospora caninum.

scientific article

Laboratory diagnostic techniques for Entamoeba species

scientific article

Limited genetic diversity among genotypes of Enterocytozoon bieneusi strains isolated from HIV-infected patients from Sydney, Australia.

scientific article

Locally acquired infection with Entamoeba histolytica in men who have sex with men in Australia

scientific article published on 01 October 2006

Microarray analyses of mouse responses to infection by Neospora caninum identifies disease associated cellular pathways in the host response ⬇️

scientific article published on September 15, 2010

Microarrays and stage conversion in Toxoplasma gondii.

scientific article published on June 2004

Molecular detection of antimalarial drug resistance in Plasmodium vivax from returned travellers to NSW, Australia during 2008-2018

scientific article published on 05 February 2020

Molecular epidemiology of imported cases of leishmaniasis in Australia from 2008 to 2014.

scientific article

Molecular phylogeny of Besnoitia and the genetic relationships among Besnoitia of cattle, wildebeest and goats

scientific article published in December 2000

Neospora abortions in dairy cattle: diagnosis, mode of transmission and control

scientific article published in March 2005

Neospora caninum: a cause of immune-mediated failure of pregnancy?

scientific article

Neosporosis and hammondiosis in dogs

scientific article

New advances in the in-vitro culture of Dientamoeba fragilis

scientific article published on 16 February 2012

Newly defined conditions for the in vitro cultivation and cryopreservation of Dientamoeba fragilis: new techniques set to fast track molecular studies on this organism.

scientific article published on 8 July 2010

On the Efficacy and Safety of Vaccination with Live Tachyzoites of Neospora caninum for Prevention of Neospora-Associated Fetal Loss in Cattle ⬇️

scientific article published on November 21, 2012

On the application of reverse vaccinology to parasitic diseases: a perspective on feature selection and ranking of vaccine candidates.

scientific article published on 8 September 2017

Oocysts and high seroprevalence of Neospora caninum in dogs living in remote Aboriginal communities and wild dogs in Australia.

scientific article published on 28 December 2011

Performance characteristics and optimisation of cut-off values of two enzyme-linked immunosorbent assays for the detection of antibodies to Neospora caninum in the serum of cattle

scientific article published on 02 May 2006

Phylogenetic relationships between Leishmania, Viannia and Sauroleishmania inferred from comparison of a variable domain within the RNA polymerase II largest subunit gene

scientific article published in July 1996

Phylogenetic relationships between Toxoplasma and Sarcocystis deduced from a comparison of 18S rDNA sequences.

scientific article published on June 1995

Polymerase chain reaction approaches for the detection of Neospora caninum and Toxoplasma gondii ⬇️

scientific article published on 01 July 1998

Populations of the south-west Pacific malaria vector Anopheles farauti s.s. revealed by ribosomal DNA transcribed spacer polymorphisms

scientific article

Positive-unlabeled learning for the prediction of conformational B-cell epitopes.

scientific article published on 9 December 2015

Predicting Protein Therapeutic Candidates for Bovine Babesiosis Using Secondary Structure Properties and Machine Learning

scientific article published on 23 July 2021

Prevalence of Neospora caninum infection in Australian (NSW) dairy cattle estimated by a newly validated ELISA for milk

article

Prevalence of antibodies to Neospora caninum in different canid populations

scientific article published in December 1997

Prevalence of enteric protozoa in human immunodeficiency virus (HIV)-positive and HIV-negative men who have sex with men from Sydney, Australia.

scientific article published in March 2007

Prevalence of gastrointestinal pathogens in Sub-Saharan Africa: systematic review and meta-analysis

scientific article

Prevalence of gastrointestinal pathogens in developed and developing countries: systematic review and meta-analysis

scientific article

Progress in the serodiagnosis of Neospora caninum infections of cattle

scientific article

Prospective study of the prevalence, genotyping, and clinical relevance of Dientamoeba fragilis infections in an Australian population.

scientific article

Protozoal hepatitis associated with immunosuppressive therapy in a dog

scientific article published on 02 February 2009

Re-evaluating the economics of neosporosis control

article

Redescription of Neospora caninum and its differentiation from related coccidia.

scientific article

Reduction in transplacental transmission of Neospora caninum in outbred mice by vaccination.

scientific article published in June 2005

Repeated Dientamoeba fragilis infections: a case report of two families from Sydney, Australia.

scientific article published on September 2009

Research into Neospora caninum-What Have We Learnt in the Last Thirty Years?

scientific article published on 23 June 2020

Resistance screening and trend analysis of imported falciparum malaria in NSW, Australia (2010 to 2016).

scientific article published on 29 May 2018

Ribosomal DNA spacer genotypes of the Anopheles bancroftii group (Diptera: Culicidae) from Australia and Papua New Guinea

scientific article published in October 2001

Schistosoma mansoni: patterns of codon usage and bias

scientific article published in January 1995

Semi-Quantitative, Duplexed qPCR Assay for the Detection of Leishmania spp. Using Bisulphite Conversion Technology

scientific article published on 01 November 2019

Seroprevalence of Neospora caninum infection following an abortion outbreak in a dairy cattle herd

scientific article published on 01 April 2000

Staged heterogeneity learning to identify conformational B-cell epitopes from antigen sequences

scientific article

Subcellular fractionation and molecular characterization of the pellicle and plasmalemma of Neospora caninum

scientific article published in October 2005

Subset partitioning of the ribosomal DNA small subunit and its effects on the phylogeny of the Anopheles punctulatus group

scientific article

Subtype distribution of Blastocystis isolates from a variety of animals from New South Wales, Australia.

scientific article published on 23 January 2013

Subtype distribution of Blastocystis isolates identified in a Sydney population and pathogenic potential of Blastocystis.

scientific article

Tertiary structure-based prediction of conformational B-cell epitopes through B factors

scientific article published on June 2014

The Leishmania major RNA polymerase II largest subunit lacks a carboxy-terminus heptad repeat structure and its encoding gene is linked with the calreticulin gene

scientific article published on May 2000

The Prevalence of Angiostrongylus cantonensis/mackerrasae Complex in Molluscs from the Sydney Region

scientific article published on 22 May 2015

The Transcriptome Sequence of Dientamoeba fragilis Offers New Biological Insights on its Metabolism, Kinome, Degradome and Potential Mechanisms of Pathogenicity.

scientific article published on 19 June 2015

The ambiguous life of Dientamoeba fragilis: the need to investigate current hypotheses on transmission ⬇️

scientific article published on February 24, 2011

The cell-mediated immune response to Neospora caninum during pregnancy in the mouse is associated with a bias towards production of interleukin-4.

scientific article published in May 2004

The complete coding region of the maxicircle as a superior phylogenetic marker for exploring evolutionary relationships between members of the Leishmaniinae.

scientific article published on 7 February 2019

The core mouse response to infection by neospora caninum defined by gene set enrichment analyses.

scientific article published on 03 September 2012

The design and analysis of microarray experiments: applications in parasitology

scientific article

The development and evaluation of a nested PCR assay for detection of Neospora caninum and Hammondia heydorni in feral mouse tissues

scientific article published on 12 March 2008

The development of random DNA probes specific for Aeromonas salmonicida.

scientific article

The evolution of trypanosomatid taxonomy.

scientific article

The first report of ovine cerebral neosporosis and evaluation of Neospora caninum prevalence in sheep in New South Wales

scientific article

The genus Hammondia is paraphyletic

scientific article published in April 1999

The phylogeny of Neospora caninum

scientific article published in April 1994

The relationship of Hammondia hammondi and Sarcocystis mucosa to other heteroxenous cyst-forming coccidia as inferred by phylogenetic analysis of the 18S SSU ribosomal DNA sequence

scientific article published on August 1999

Thioredoxins of a parasitic nematode: comparison of the 16- and 12-kDA thioredoxins from Haemonchus contortus

scientific article published on 20 March 2008

Treatment failure in patients with chronic Blastocystis infection.

scientific article

Update on the pathogenic potential and treatment options for Blastocystis sp

scientific article

Vacceed: a high-throughput in silico vaccine candidate discovery pipeline for eukaryotic pathogens based on reverse vaccinology

scientific article published on 29 April 2014

What is the global economic impact of Neospora caninum in cattle - the billion dollar question.

scientific article published on 12 December 2012

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