List of works - Tomoo Ogi

A 10-year follow-up of a child with mild case of xeroderma pigmentosum complementation group D diagnosed by whole-genome sequencing

scientific article published on 19 March 2016

A Japanese Case of Galli-Galli Disease due to a Previously Unreported POGLUT1 Mutation

scientific article published on 01 April 2019

A rapid non-radioactive technique for measurement of repair synthesis in primary human fibroblasts by incorporation of ethynyl deoxyuridine (EdU).

scientific article published on 29 January 2009

A rapid, comprehensive system for assaying DNA repair activity and cytotoxic effects of DNA-damaging reagents

scientific article published on 4 December 2014

A semi-automated non-radioactive system for measuring recovery of RNA synthesis and unscheduled DNA synthesis using ethynyluracil derivatives

scientific article

ALC1/CHD1L, a chromatin-remodeling enzyme, is required for efficient base excision repair

scientific article published on 17 November 2017

An XPA gene splicing mutation resulting in trace protein expression in an elderly patient with xeroderma pigmentosum group A without neurological abnormalities.

scientific article published on 7 September 2016

Analysis of clinical symptoms and ABCC6 mutations in 76 Japanese patients with pseudoxanthoma elasticum.

scientific article published on 10 February 2017

Author Correction: Phosphorylated HBO1 at UV irradiated sites is essential for nucleotide excision repair.

scientific article published on 20 April 2018

Binding and transcriptional activation of non-flagellar genes by the Escherichia coli flagellar master regulator FlhD2C2.

scientific article published on June 2005

Calcification in dermal fibroblasts from a patient with GGCX syndrome accompanied by upregulation of osteogenic molecules

scientific article

Cerebellar ataxia-dominant phenotype in patients with ERCC4 mutations.

scientific article

Common TFIIH recruitment mechanism in global genome and transcription-coupled repair subpathways.

scientific article published on 24 October 2017

Differential Bvg phase-dependent regulation and combinatorial role in pathogenesis of two Bordetella paralogs, BipA and BcfA.

scientific article published on 9 March 2007

Digenic mutations in <i>ALDH2</i> and <i>ADH5</i> impair formaldehyde clearance and cause a multisystem disorder, AMeD syndrome

scientific article published on 18 December 2020

ELOF1 is a transcription-coupled DNA repair factor that directs RNA polymerase II ubiquitylation

scientific article published on 09 June 2021

Expanding the phenotype of biallelic loss-of-function variants in the NSUN2 gene: Description of four individuals with juvenile cataract, chronic nephritis, or brain anomaly as novel complications

scientific article published on 20 October 2020

Expression of human and mouse genes encoding polkappa: testis-specific developmental regulation and AhR-dependent inducible transcription

scientific article published in November 2001

Functional Comparison of XPF Missense Mutations Associated to Multiple DNA Repair Disorders

article

Functional and clinical relevance of novel mutations in a large cohort of patients with Cockayne syndrome

scientific article published on 23 March 2018

Functional characterization of the novel BRAF complex mutation, BRAF(V600delinsYM) , identified in papillary thyroid carcinoma.

scientific article

Hypomorphic PCNA mutation underlies a human DNA repair disorder.

scientific article

Identification of additional genes belonging to the LexA regulon in Escherichia coli

scientific article published on March 2000

Identification of the first ATRIP-deficient patient and novel mutations in ATR define a clinical spectrum for ATR-ATRIP Seckel Syndrome

scientific article

Identification, timing, and signal specificity of Pseudomonas aeruginosa quorum-controlled genes: a transcriptome analysis

scientific article (publication date: April 2003)

Involvement of vertebrate Polkappa in translesion DNA synthesis across DNA monoalkylation damage

scientific article published on 23 November 2005

JAK/STAT3 and NF-κB Signaling Pathways Regulate Cancer Stem-Cell Properties in Anaplastic Thyroid Cancer Cells

scientific article published on 15 March 2019

Localisation of human Y-family DNA polymerase kappa: relationship to PCNA foci.

scientific article

Malfunction of nuclease ERCC1-XPF results in diverse clinical manifestations and causes Cockayne syndrome, xeroderma pigmentosum, and Fanconi anemia

scientific article

Mammalian Pol kappa: regulation of its expression and lesion substrates.

scientific article

Mutations in UVSSA cause UV-sensitive syndrome and impair RNA polymerase IIo processing in transcription-coupled nucleotide-excision repair

scientific article

Novel compound heterozygous DNA ligase IV mutations in an adolescent with a slowly-progressing radiosensitive-severe combined immunodeficiency

scientific article published on 11 July 2015

Novel function of HATs and HDACs in homologous recombination through acetylation of human RAD52 at double-strand break sites.

scientific article published on 28 March 2018

PCNA ubiquitylation ensures timely completion of unperturbed DNA replication in fission yeast

scientific article

PRKDC mutations in a SCID patient with profound neurological abnormalities

scientific article published on 3 June 2013

Phosphorylated HBO1 at UV irradiated sites is essential for nucleotide excision repair.

scientific article

Polkappa protects mammalian cells against the lethal and mutagenic effects of benzo[a]pyrene

scientific article

SETDB1, HP1 and SUV39 promote repositioning of 53BP1 to extend resection during homologous recombination in G2 cells.

scientific article published on 22 July 2015

Sensitivity and dose dependency of radiation-induced injury in hematopoietic stem/progenitor cells in mice.

scientific article

Severe achondroplasia due to two de novo variants in the transmembrane domain of FGFR3 on the same allele: A case report

scientific article published on 23 January 2020

The absence of DNA polymerase kappa does not affect somatic hypermutation of the mouse immunoglobulin heavy chain gene.

scientific article

Three DNA polymerases, recruited by different mechanisms, carry out NER repair synthesis in human cells

scientific article

Translesion synthesis: Y-family polymerases and the polymerase switch

scientific article published on 23 March 2007

Transplantation of bioengineered rat lungs recellularized with endothelial and adipose-derived stromal cells.

scientific article published on 16 August 2017

Two unrelated patients with MRE11A mutations and Nijmegen breakage syndrome-like severe microcephaly.

scientific article published on 12 January 2011

XRCC4 deficiency in human subjects causes a marked neurological phenotype but no overt immunodeficiency.

scientific article published on 23 July 2015

miR-196a downregulation increases the expression of type I and III collagens in keloid fibroblasts

scientific article

List of works by Tomoo Ogi

A 10-year follow-up of a child with mild case of xeroderma pigmentosum complementation group D diagnosed by whole-genome sequencing

A Japanese Case of Galli-Galli Disease due to a Previously Unreported POGLUT1 Mutation

A rapid non-radioactive technique for measurement of repair synthesis in primary human fibroblasts by incorporation of ethynyl deoxyuridine (EdU).

A rapid, comprehensive system for assaying DNA repair activity and cytotoxic effects of DNA-damaging reagents

A semi-automated non-radioactive system for measuring recovery of RNA synthesis and unscheduled DNA synthesis using ethynyluracil derivatives

ALC1/CHD1L, a chromatin-remodeling enzyme, is required for efficient base excision repair

An XPA gene splicing mutation resulting in trace protein expression in an elderly patient with xeroderma pigmentosum group A without neurological abnormalities.

Analysis of clinical symptoms and ABCC6 mutations in 76 Japanese patients with pseudoxanthoma elasticum.

Author Correction: Phosphorylated HBO1 at UV irradiated sites is essential for nucleotide excision repair.

Binding and transcriptional activation of non-flagellar genes by the Escherichia coli flagellar master regulator FlhD2C2.

Calcification in dermal fibroblasts from a patient with GGCX syndrome accompanied by upregulation of osteogenic molecules

Cerebellar ataxia-dominant phenotype in patients with ERCC4 mutations.

Common TFIIH recruitment mechanism in global genome and transcription-coupled repair subpathways.

Differential Bvg phase-dependent regulation and combinatorial role in pathogenesis of two Bordetella paralogs, BipA and BcfA.

Digenic mutations in <i>ALDH2</i> and <i>ADH5</i> impair formaldehyde clearance and cause a multisystem disorder, AMeD syndrome

ELOF1 is a transcription-coupled DNA repair factor that directs RNA polymerase II ubiquitylation

Expanding the phenotype of biallelic loss-of-function variants in the NSUN2 gene: Description of four individuals with juvenile cataract, chronic nephritis, or brain anomaly as novel complications

Expression of human and mouse genes encoding polkappa: testis-specific developmental regulation and AhR-dependent inducible transcription

Functional Comparison of XPF Missense Mutations Associated to Multiple DNA Repair Disorders

Functional and clinical relevance of novel mutations in a large cohort of patients with Cockayne syndrome

Functional characterization of the novel BRAF complex mutation, BRAF(V600delinsYM) , identified in papillary thyroid carcinoma.

Hypomorphic PCNA mutation underlies a human DNA repair disorder.

Identification of additional genes belonging to the LexA regulon in Escherichia coli

Identification of the first ATRIP-deficient patient and novel mutations in ATR define a clinical spectrum for ATR-ATRIP Seckel Syndrome

Identification, timing, and signal specificity of Pseudomonas aeruginosa quorum-controlled genes: a transcriptome analysis

Involvement of vertebrate Polkappa in translesion DNA synthesis across DNA monoalkylation damage

JAK/STAT3 and NF-κB Signaling Pathways Regulate Cancer Stem-Cell Properties in Anaplastic Thyroid Cancer Cells

Localisation of human Y-family DNA polymerase kappa: relationship to PCNA foci.

Malfunction of nuclease ERCC1-XPF results in diverse clinical manifestations and causes Cockayne syndrome, xeroderma pigmentosum, and Fanconi anemia

Mammalian Pol kappa: regulation of its expression and lesion substrates.

Mutations in UVSSA cause UV-sensitive syndrome and impair RNA polymerase IIo processing in transcription-coupled nucleotide-excision repair

Novel compound heterozygous DNA ligase IV mutations in an adolescent with a slowly-progressing radiosensitive-severe combined immunodeficiency

Novel function of HATs and HDACs in homologous recombination through acetylation of human RAD52 at double-strand break sites.

PCNA ubiquitylation ensures timely completion of unperturbed DNA replication in fission yeast

PRKDC mutations in a SCID patient with profound neurological abnormalities

Phosphorylated HBO1 at UV irradiated sites is essential for nucleotide excision repair.

Polkappa protects mammalian cells against the lethal and mutagenic effects of benzo[a]pyrene

SETDB1, HP1 and SUV39 promote repositioning of 53BP1 to extend resection during homologous recombination in G2 cells.

Sensitivity and dose dependency of radiation-induced injury in hematopoietic stem/progenitor cells in mice.

Severe achondroplasia due to two de novo variants in the transmembrane domain of FGFR3 on the same allele: A case report

The absence of DNA polymerase kappa does not affect somatic hypermutation of the mouse immunoglobulin heavy chain gene.

Three DNA polymerases, recruited by different mechanisms, carry out NER repair synthesis in human cells

Translesion synthesis: Y-family polymerases and the polymerase switch

Transplantation of bioengineered rat lungs recellularized with endothelial and adipose-derived stromal cells.

Two unrelated patients with MRE11A mutations and Nijmegen breakage syndrome-like severe microcephaly.

XRCC4 deficiency in human subjects causes a marked neurological phenotype but no overt immunodeficiency.

miR-196a downregulation increases the expression of type I and III collagens in keloid fibroblasts