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List of works by Gabriel Valiente

A distance metric for a class of tree-sibling phylogenetic networks

scientific article

A perl package and an alignment tool for phylogenetic networks

scientific article

Alignment of virus-host protein-protein interaction networks by integer linear programming: SARS-CoV-2

scientific article published on 07 December 2020

All that glisters is not galled

scientific article published on 2 July 2009

An edit script for taxonomic classifications

scientific article

An optimized TOPS+ comparison method for enhanced TOPS models

scientific article

Characterization of Reticulate Networks Based on the Coalescent with Recombination

scientific article published in 2009

Characterization of phylogenetic networks with NetTest

scientific article

Characterization of reticulate networks based on the coalescent with recombination

scientific article

Comparison of galled trees.

scientific article published in March 2011

Comparison of tree-child phylogenetic networks

scientific article

Editorial

Efficient reconstruction of metabolic pathways by bidirectional chemical search

scientific article published on 20 December 2008

Flexible taxonomic assignment of ambiguous sequencing reads.

scientific article

Further steps in TANGO: improved taxonomic assignment in metagenomics.

scientific article published on 3 May 2013

Linear structure of bipartite permutation graphs and the longest path problem

article published in 2007

Metrics for phylogenetic networks I: generalizations of the Robinson-Foulds metric

scientific article published in January 2009

Metrics for phylogenetic networks II: nodal and triplets metrics

scientific article published in July 2009

Nodal distances for rooted phylogenetic trees.

scientific article published on 16 September 2009

On Nakhleh's metric for reduced phylogenetic networks.

scientific article published in October 2009

On the ancestral compatibility of two phylogenetic trees with nested taxa

scientific article

Optimized ancestral state reconstruction using Sankoff parsimony

scientific article

Phylogenetic reconstruction from non-genomic data

scientific article

Reference databases for taxonomic assignment in metagenomics

scientific article

Seeded tree alignment

scientific article published in October 2008

The comparison of tree-sibling time consistent phylogenetic networks is graph isomorphism-complete.

scientific article published on 2 April 2014

Tripartitions do not always discriminate phylogenetic networks.

scientific article published on 3 December 2007

Validation of metabolic pathway databases based on chemical substructure search

scientific article published on 12 March 2007