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List of works by Stefan J. Green

A Pilot Study of Chicago Waterways as Reservoirs of Multidrug-Resistant Enterobacteriaceae (MDR-Ent) in a High-Risk Region for Community-Acquired MDR-Ent Infection in Children

scientific article published on 24 March 2020

A limited microbial consortium is responsible for extended bioreduction of uranium in a contaminated aquifer

scientific article

A salinity and sulfate manipulation of hypersaline microbial mats reveals stasis in the cyanobacterial community structure

scientific article

A survey of deepwater horizon (DWH) oil-degrading bacteria from the Eastern oyster biome and its surrounding environment

scientific article (publication date: 2014)

APOE-modulated Aβ-induced neuroinflammation in Alzheimer's disease: current landscape, novel data, and future perspective

scientific article

Age Drives Distortion of Brain Metabolic, Vascular and Cognitive Functions, and the Gut Microbiome

scientific article published on 25 September 2017

An invasive appetite: Combining molecular and stable isotope analyses to reveal the diet of introduced house mice (Mus musculus) on a small, subtropical island

scientific article published on 19 October 2023

Atopic dermatitis and food sensitization in South African toddlers: Role of fiber and gut microbiota.

scientific article published in June 2017

Bacterial virulence against an oceanic bloom-forming phytoplankter is mediated by algal DMSP

scientific article published on 24 October 2018

Bioelectrochemical perchlorate reduction in a microbial fuel cell.

scientific article published on June 2010

Biogeochemical cycling and microbial diversity in the thrombolitic microbialites of Highborne Cay, Bahamas.

scientific article

Biogeochemical versus Conventional Landfill Soil Covers: Analysis of Gas Flow Profiles, Microbial Communities, and Mineralogy

scientific article published in 2022

Burn Injury Alters the Intestinal Microbiome and Increases Gut Permeability and Bacterial Translocation

scientific article published on 8 July 2015

Circadian Rhythm and the Gut Microbiome.

scientific article published on 6 September 2016

Circadian disorganization alters intestinal microbiota

scientific article

Colonic bacterial composition in Parkinson's disease.

scientific article published on 16 July 2015

Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation

scientific article

Competing factors of compost concentration and proximity to root affect the distribution of streptomycetes.

scientific article published on 29 July 2005

Complete Genome Sequence of a USA100 Methicillin-Resistant Staphylococcus aureus Strain

scientific article published on 14 March 2019

Considerations When Designing a Microbiome Study: Implications for Nursing Science

scientific article published on 08 November 2018

Contrasting patterns of seed and root colonization by bacteria from the genus Chryseobacterium and from the family Oxalobacteraceae

scientific article published on 24 May 2007

Deconstructing the polymerase chain reaction: understanding and correcting bias associated with primer degeneracies and primer-template mismatches

scientific article published on 21 May 2015

Deep Characterization of the Microbiomes of Calophya spp. (Hemiptera: Calophyidae) Gall-Inducing Psyllids Reveals the Absence of Plant Pathogenic Bacteria and Three Dominant Endosymbionts.

scientific article published on 10 July 2015

Denitrifying bacteria from the genus Rhodanobacter dominate bacterial communities in the highly contaminated subsurface of a nuclear legacy waste site

scientific article

Denitrifying bacteria isolated from terrestrial subsurface sediments exposed to mixed-waste contamination

scientific article

Detection of respiratory pathogens in clinical samples using metagenomic shotgun sequencing

scientific article published on 28 May 2019

Dietary Fiber Treatment Corrects the Composition of Gut Microbiota, Promotes SCFA Production, and Suppresses Colon Carcinogenesis.

scientific article published on 16 February 2018

Dietary inulin alters the gut microbiome, enhances systemic metabolism and reduces neuroinflammation in an APOE4 mouse model

scientific article published on 28 August 2019

Draft Genome Sequence of Alicyclobacillus acidoterrestris Strain ATCC 49025.

scientific article

Draft Genome Sequence of Rhodococcus opacus Strain M213 Shows a Diverse Catabolic Potential

scientific article published on January 2013

Draft Genome Sequence of the Pathogenic Bacterium Vibrio vulnificus V252 Biotype 1, Isolated in Israel

scientific article published on 15 October 2015

Draft genome sequence of Flavobacterium sp. strain F52, isolated from the rhizosphere of bell pepper (Capsicum annuum L. cv. Maccabi).

scientific article published on October 2012

Draft genome sequences for oil-degrading bacterial strains from beach sands impacted by the deepwater horizon oil spill

scientific article published on 19 December 2013

Effect of Basic Oxygen Furnace Slag-Infiltrated Water on Methane Oxidation and Community Composition in Biogeochemical Landfill Cover System

scientific article published in 2020

Effect of Dietary Fiber on the Composition of the Murine Dental Microbiome

scientific article published on 01 June 2019

Effects of green tea on miRNA and microbiome of oral epithelium.

scientific article published on 12 April 2018

Effects of nitrate on the stability of uranium in a bioreduced region of the subsurface

scientific article

Faropenem resistance causes in vitro cross-resistance to carbapenems in ESBL-producing Escherichia coli

scientific article published on 17 January 2020

Four Weeks of Treatment With Rifaximin Fails to Significantly Alter Microbial Diversity in Rectal Samples of HIV-Infected Immune Non-Responders (ACTG A5286) Which May be Attributed to Rectal Swab Use

scientific article published on 23 September 2019

Fructose diet alleviates acetaminophen-induced hepatotoxicity in mice.

scientific article

Genome Sequence of Marine-Derived sp. Strain F001, a Producer of Akashin A and Diazaquinomycins ⬇️

scientific article published on 09 May 2019

Genome sequences for six Rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capabilities

scientific article

Genome sequences for three denitrifying bacterial strains isolated from a uranium- and nitrate-contaminated subsurface environment

scientific article published on 05 July 2013

Genomic Epidemiology of USA300 Methicillin-Resistant Staphylococcus aureus in an Urban Community

scientific article

Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP)

scientific article

Genomic and Epidemiological Evidence for Community Origins of Hospital-Onset Methicillin-Resistant Staphylococcus aureus Bloodstream Infections

scientific article published on 9 May 2017

Geobacter daltonii sp. nov., an Fe(III)- and uranium(VI)-reducing bacterium isolated from a shallow subsurface exposed to mixed heavy metal and hydrocarbon contamination

scientific article

Hepatic deficiency of the pioneer transcription factor FoxA restricts hepatitis B virus biosynthesis by the developmental regulation of viral DNA methylation

scientific article

High Throughput Analysis of Integron Gene Cassettes in Wastewater Environments

scientific article

Host Genetic Factors Associated with Vaginal Microbiome Composition in Kenyan Women

scientific article published on 28 July 2020

Human milk oligosaccharides protect against the development of autoimmune diabetes in NOD-mice.

scientific article published in March 2018

Hydrocarbon-degrading bacteria and the bacterial community response in gulf of Mexico beach sands impacted by the deepwater horizon oil spill

scientific article

Investigation of Respiratory Syncytial Virus Outbreak on an Adult Stem Cell Transplant Unit using Whole Genome Sequencing

scientific article

Isolation and physiological characterization of psychrophilic denitrifying bacteria from permanently cold Arctic fjord sediments (Svalbard, Norway).

scientific article

Ketogenic diet enhances neurovascular function with altered gut microbiome in young healthy mice.

scientific article

Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community

scientific article

Longitudinal Survey of Microbiota in Hospitalized Preterm Very-Low-Birth-Weight Infants

scientific article published on 29 July 2015

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes.

scientific article published on 19 September 2011

Metabolic Profiling of Blood and Urine for Exploring the Functional Role of the Microbiota in Human Health

scientific article published on 29 July 2020

Metagenomic evaluation of bacterial and archaeal diversity in the geothermal hot springs of manikaran, India

scientific article

Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO2 Gradient in the Mediterranean Sea.

scientific article published on 12 February 2015

Microbial Communities of Stored Product Mites: Variation by Species and Population

scientific article published on 27 August 2020

Microbial Diversity of Genital Ulcers of HSV-2 Seropositive Women

scientific article published on 13 November 2017

Microbial and geochemical assessment of bauxitic un-mined and post-mined chronosequence soils from Mocho Mountains, Jamaica.

scientific article

Microbial community structure and activity linked to contrasting biogeochemical gradients in bog and fen environments of the Glacial Lake Agassiz Peatland ⬇️

scientific article published on July 27, 2012

Microbial diversity of genital ulcer disease in men enrolled in a randomized trial of male circumcision in Kisumu, Kenya

scientific article

Microbial metabolic potential for carbon degradation and nutrient (nitrogen and phosphorus) acquisition in an ombrotrophic peatland

scientific article

Molecular and lipid biomarker analysis of a gypsum-hosted endoevaporitic microbial community.

scientific article

Molecular and morphological characterization of cyanobacterial diversity in the stromatolites of Highborne Cay, Bahamas

scientific article

Niche and host-associated functional signatures of the root surface microbiome.

scientific article

Relative DNA methylation and demethylation efficiencies during postnatal liver development regulate hepatitis B virus biosynthesis

scientific article published on 23 December 2020

Restriction site-associated DNA sequencing generates high-quality single nucleotide polymorphisms for assessing hybridization between bighead and silver carp in the United States and China

scientific article published on 20 August 2013

Rhodanobacter denitrificans sp. nov., isolated from nitrate-rich zones of a contaminated aquifer

scientific article

Shifts in methanogen community structure and function associated with long-term manipulation of sulfate and salinity in a hypersaline microbial mat.

scientific article

Significant differences in fecal microbiota are associated with various stages of glucose tolerance in African American male veterans.

scientific article published on 8 July 2015

Similarity of bacterial communities in sawdust- and straw-amended cow manure composts.

scientific article published in April 2004

Single-cell transcriptional changes associated with drug tolerance and response to combination therapies in cancer

scientific article published on 12 March 2021

Starch-entrapped microsphere fibers improve bowel habit but do not exhibit prebiotic capacity in those with unsatisfactory bowel habits: a phase I, randomized, double-blind, controlled human trial

scientific article published on 2 June 2017

Suicide polymerase endonuclease restriction, a novel technique for enhancing PCR amplification of minor DNA templates.

scientific article published on August 2005

Taxa-specific changes in soil microbial community composition induced by pyrogenic carbon amendments

article

The Circadian Clock Mutation Promotes Intestinal Dysbiosis.

scientific article published in February 2016

The Combination of 2'-Fucosyllactose with Short-Chain Galacto-Oligosaccharides and Long-Chain Fructo-Oligosaccharides that Enhance Influenza Vaccine Responses Is Associated with Mucosal Immune Regulation in Mice

article

The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight

scientific article

The Potential Role of Gut-Derived Inflammation in Multiple System Atrophy.

scientific article

The bacterial composition within the Sarracenia purpurea model system: local scale differences and the relationship with the other members of the food web.

scientific article

Thermodesulfobacterium geofontis sp. nov., a hyperthermophilic, sulfate-reducing bacterium isolated from Obsidian Pool, Yellowstone National Park

scientific article

Watershed-scale fungal community characterization along a pH gradient in a subsurface environment cocontaminated with uranium and nitrate.

scientific article

Whole-genome sequences of five oyster-associated bacteria show potential for crude oil hydrocarbon degradation

scientific article published on 3 October 2013

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