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List of works by Sonia Longhi

A practical overview of protein disorder prediction methods

scientific article

An arsenal of methods for the experimental characterization of intrinsically disordered proteins - How to choose and combine them?

scientific article published on 26 July 2019

Analyzing the Folding and Binding Steps of an Intrinsically Disordered Protein by Protein Engineering

scientific article

Assessing induced folding of an intrinsically disordered protein by site-directed spin-labeling electron paramagnetic resonance spectroscopy.

scientific article

Assessing induced folding within the intrinsically disordered C-terminal domain of the Henipavirus nucleoproteins by site-directed spin labeling EPR spectroscopy

scientific article published on 13 August 2012

Assessing protein disorder and induced folding

scientific article

Atomic resolution (1.0 A) crystal structure of Fusarium solani cutinase: stereochemical analysis

scientific article

Atomic resolution description of the interaction between the nucleoprotein and phosphoprotein of Hendra virus

scientific article published in 2013

Binding induced folding: Lessons from the kinetics of interaction between NTAIL and XD

scientific article published on 19 July 2019

Biochemical and structural studies of the oligomerization domain of the Nipah virus phosphoprotein: evidence for an elongated coiled-coil homotrimer

scientific article

Characterization of the interactions between the nucleoprotein and the phosphoprotein of Henipavirus

scientific article

Cloning and nucleotide sequences of two lipase genes from Candida cylindracea

scientific article published in June 1992

Coiled-coil deformations in crystal structures: the measles virus phosphoprotein multimerization domain as an illustrative example

scientific article

Compaction and binding properties of the intrinsically disordered C-terminal domain of Henipavirus nucleoprotein as unveiled by deletion studies.

scientific article

Conformational analysis of the partially disordered measles virus N(TAIL)-XD complex by SDSL EPR spectroscopy

scientific article

Conformational disorder

scientific article published in January 2010

Conformational footprinting of proteins using a combination of top-down electron transfer dissociation and ion mobility

article

Conformational response to charge clustering in synthetic intrinsically disordered proteins

scientific article published on 17 July 2018

Crystal structure of the measles virus phosphoprotein domain responsible for the induced folding of the C-terminal domain of the nucleoprotein

scientific article

Cytosolic 5'-triphosphate ended viral leader transcript of measles virus as activator of the RIG I-mediated interferon response

scientific article

Demonstration of a folding after binding mechanism in the recognition between the measles virus NTAIL and X domains

scientific article published on 22 December 2014

DisProt 7.0: a major update of the database of disordered proteins

scientific article published on 13 December 2016

DisProt 7.0: a major update of the database of disordered proteins.

scientific article

Dissecting partner recognition by an intrinsically disordered protein using descriptive random mutagenesis

scientific article

Diversification of EPR signatures in Site Directed Spin Labeling using a β-phosphorylated nitroxide

scientific article published on 01 March 2014

Dividing to unveil protein microheterogeneities: traveling wave ion mobility study

scientific article

Dynamics of Fusarium solani cutinase investigated through structural comparison among different crystal forms of its variants

scientific article

Dynamics of the intrinsically disordered C-terminal domain of the nipah virus nucleoprotein and interaction with the x domain of the phosphoprotein as unveiled by NMR spectroscopy

scientific article published on 9 December 2014

Ebola virus VP30 is an RNA binding protein

scientific article

Essential amino acids of the hantaan virus N protein in its interaction with RNA.

scientific article

Experimental Characterization of Fuzzy Protein Assemblies: Interactions of Paramyxoviral NTAIL Domains With Their Functional Partners

scientific article published on 05 October 2018

Exploration of nucleoprotein α-MoRE and XD interactions of Nipah and Hendra viruses

scientific article published on 24 April 2018

Exploring hydrophobic sites in proteins with xenon or krypton ⬇️

scientific article published on January 1, 1998

Extracting structural information from charge-state distributions of intrinsically disordered proteins by non-denaturing electrospray-ionization mass spectrometry

scientific article published on January 2013

First evidence for the salt-dependent folding and activity of an esterase from the halophilic archaea Haloarcula marismortui

scientific article published on 17 March 2009

Folding Mechanism of the SH3 Domain from Grb2

scientific article published on 23 August 2018

Fuzzy regions in an intrinsically disordered protein impair protein-protein interactions

scientific article published on 18 December 2015

High affinity binding between Hsp70 and the C-terminal domain of the measles virus nucleoprotein requires an Hsp40 co-chaperone

scientific article

How Robust Is the Mechanism of Folding-Upon-Binding for an Intrinsically Disordered Protein?

scientific article published in April 2018

How disorder influences order and vice versa--mutual effects in fusion proteins containing an intrinsically disordered and a globular protein.

scientific article published on 28 September 2010

How disordered is my protein and what is its disorder for? A guide through the "dark side" of the protein universe

scientific article

How order and disorder within paramyxoviral nucleoproteins and phosphoproteins orchestrate the molecular interplay of transcription and replication

scientific article published on 09 June 2017

Hsp72 recognizes a P binding motif in the measles virus N protein C-terminus

scientific journal article

Identification and Structural Characterization of an Intermediate in the Folding of the Measles Virus X Domain

scientific article

InSiDDe: A Server for Designing Artificial Disordered Proteins

scientific article

Insights into the Hendra virus NTAIL-XD complex: Evidence for a parallel organization of the helical MoRE at the XD surface stabilized by a combination of hydrophobic and polar interactions

scientific article published on 8 May 2015

Insights into the coiled-coil organization of the Hendra virus phosphoprotein from combined biochemical and SAXS studies

scientific article published on 29 January 2015

Interaction between the C-terminal domains of N and P proteins of measles virus investigated by NMR

scientific article

Interaction between the C-terminal domains of measles virus nucleoprotein and phosphoprotein: a tight complex implying one binding site

scientific article published on 17 September 2012

Interfacial Properties of NTAIL, an Intrinsically Disordered Protein

scientific article published in December 2017

Intrinsic disorder in Viral Proteins Genome-Linked: experimental and predictive analyses

scientific article published on 16 February 2009

Intrinsic disorder in measles virus nucleocapsids.

scientific article

Introducing protein intrinsic disorder

scientific article published on 17 April 2014

Liquid-Liquid Phase Separation by Intrinsically Disordered Protein Regions of Viruses: Roles in Viral Life Cycle and Control of Virus-Host Interactions

scientific article published on 28 November 2020

Mapping alpha-helical induced folding within the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by site-directed spin-labeling EPR spectroscopy

scientific article

MeDor: a metaserver for predicting protein disorder

scientific article

Measles virus (MV) nucleoprotein binds to a novel cell surface receptor distinct from FcgammaRII via its C-terminal domain: role in MV-induced immunosuppression

scientific article published on November 2003

Modular organization of rabies virus phosphoprotein.

scientific article published on 31 March 2009

Modulation of Measles Virus N Interactions through Fuzziness and Sequence Features of Disordered Binding Sites

scientific article published on 27 December 2018

Modulation of Re-initiation of Measles Virus Transcription at Intergenic Regions by PXD to NTAIL Binding Strength.

scientific article

Molecular basis for structural heterogeneity of an intrinsically disordered protein bound to a partner by combined ESI-IM-MS and modeling

scientific article published on 16 December 2014

Monitoring structural transitions in IDPs by site-directed spin labeling EPR spectroscopy.

scientific article

Monitoring structural transitions in IDPs by vibrational spectroscopy of cyanylated cysteine

scientific article published in January 2012

Multiscaled exploration of coupled folding and binding of an intrinsically disordered molecular recognition element in measles virus nucleoprotein.

scientific article published on 16 September 2013

Mutual effects of disorder and order in fusion proteins between intrinsically disordered domains and fluorescent proteins.

scientific article published on 18 August 2011

One-step generation of error-prone PCR libraries using Gateway® technology

scientific article

Order and Disorder in the Replicative Complex of Paramyxoviruses

scientific article published on January 2015

PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins

scientific article published on 10 December 2020

Packing forces in nine crystal forms of cutinase ⬇️

scientific article published on May 15, 1998

Partner-Mediated Polymorphism of an Intrinsically Disordered Protein

scientific article published on 29 November 2017

Plasticity in structural and functional interactions between the phosphoprotein and nucleoprotein of measles virus.

scientific article published on 8 February 2012

Predicting Conformational Disorder

Predicting protein disorder and induced folding: from theoretical principles to practical applications.

scientific article

Probing structural transitions in both structured and disordered proteins using site-directed spin-labeling EPR spectroscopy.

scientific article published on 24 February 2011

Probing structural transitions in the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by vibrational spectroscopy of cyanylated cysteines

scientific article

Probing the dynamic properties of two sites simultaneously in a protein-protein interaction process: a SDSL-EPR study

scientific article published on 07 October 2019

Protein Engineering

2007 scholarly article

Recombinant pheromone binding protein 1 from Mamestra brassicae (MbraPBP1). Functional and structural characterization

scientific article

Regulation of measles virus gene expression by P protein coiled-coil properties

article

Relevance of Electrostatic Charges in Compactness, Aggregation, and Phase Separation of Intrinsically Disordered Proteins

scientific article published on 27 August 2020

Reply to Jensen and Blackledge: Dual quantifications of intrinsically disordered proteins by NMR ensembles and molecular dynamics simulations

scientific article published on April 2014

Rules governing selective protein carbonylation

scientific article

SPINE bioinformatics and data-management aspects of high-throughput structural biology

scientific article

Sequence of events in measles virus replication: role of phosphoprotein-nucleocapsid interactions

scientific article published on 9 July 2014

Simultaneous quantification of protein order and disorder

scientific article published in March 2017

Solution conformational features and interfacial properties of an intrinsically disordered peptide coupled to alkyl chains: a new class of peptide amphiphiles

scientific article published on 13 March 2013

Solution structure of the C-terminal X domain of the measles virus phosphoprotein and interaction with the intrinsically disordered C-terminal domain of the nucleoprotein

scientific article published in September 2010

Structural Disorder within Paramyxoviral Nucleoproteins and Phosphoproteins in Their Free and Bound Forms: From Predictions to Experimental Assessment

scientific article published on 10 July 2015

Structural analysis of the human respiratory syncytial virus phosphoprotein: characterization of an alpha-helical domain involved in oligomerization

scientific article published on January 2006

Structural and dynamics analysis of intrinsically disordered proteins by high-speed atomic force microscopy

scientific article published on 23 November 2020

Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins.

scientific article published on 14 November 2017

Structural disorder and modular organization in Paramyxovirinae N and P.

scientific article

Structural disorder in viral proteins

scientific article published on 13 May 2014

Structural disorder within Henipavirus nucleoprotein and phosphoprotein: from predictions to experimental assessment

scientific article

Structural disorder within paramyxoviral nucleoproteins

scientific article

Structural disorder within paramyxovirus nucleoproteins and phosphoproteins

scientific article published on August 2011

Structural disorder within the measles virus nucleoprotein and phosphoprotein

scientific article published on August 2010

Structural disorder within the replicative complex of measles virus: functional implications

scientific article

Structural genomics of the SARS coronavirus: cloning, expression, crystallization and preliminary crystallographic study of the Nsp9 protein

scientific article published on 19 August 2003

Structure-activity of cutinase, a small lipolytic enzyme

scientific article

Substitution of two residues in the measles virus nucleoprotein results in an impaired self-association

scientific article published in October 2002

The C-terminal domain of measles virus nucleoprotein belongs to the class of intrinsically disordered proteins that fold upon binding to their physiological partner

scientific article published in February 2004

The C-terminal domain of the measles virus nucleoprotein is intrinsically disordered and folds upon binding to the C-terminal moiety of the phosphoprotein

scientific article published on 5 March 2003

The Folding Pathway of the KIX Domain.

scientific article published on May 2017

The Henipavirus V protein is a prevalently unfolded protein with a zinc-finger domain involved in binding to DDB1.

scientific article published on 3 October 2017

The N-terminal domain of the phosphoprotein of Morbilliviruses belongs to the natively unfolded class of proteins

scientific article

The interaction between the measles virus nucleoprotein and the Interferon Regulator Factor 3 relies on a specific cellular environment

scientific article

The intrinsically disordered C-terminal domain of the measles virus nucleoprotein interacts with the C-terminal domain of the phosphoprotein via two distinct sites and remains predominantly unfolded

scientific article published on August 2005

The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) envelope (E) protein harbors a conserved BH3-like sequence

scientific article published on 10 April 2020

The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world.

scholarly article

Transcription et réplication des Mononegavirales : une machine moléculaire originale

scientific article published on 01 August 2012

Understanding Intramolecular Crosstalk in an Intrinsically Disordered Protein

scientific article published on 12 February 2019

VaZyMolO: a tool to define and classify modularity in viral proteins

scientific article published in March 2005

Viral RNA-polymerases -- a predicted 2'-O-ribose methyltransferase domain shared by all Mononegavirales

scientific article published on May 2002

What's in a name? Why these proteins are intrinsically disordered: Why these proteins are intrinsically disordered

scientific article

[How is transcription reinitiation governed in measles virus?]

scientific article

hsp70 and a novel axis of type I interferon-dependent antiviral immunity in the measles virus-infected brain

scientific article published on 7 November 2012

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