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List of works by Lauren McIntyre

A Robust Methodology for Assessing Differential Homeolog Contributions to the Transcriptomes of Allopolyploids

scientific article published on 13 September 2018

A comprehensive analysis of myocardial substrate preference emphasizes the need for a synchronized fluxomic/metabolomic research design

scientific article published on 14 April 2017

A flexible Bayesian method for detecting allelic imbalance in RNA-seq data

scientific article

A systems biology approach identified different regulatory networks targeted by KSHV miR-K12-11 in B cells and endothelial cells

scientific article

Additivity and trans-acting effects on gene expression in male Drosophila simulans.

scientific article

Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas

scientific article

Allele-specific expression assays using Solexa

scientific article published on 9 September 2009

Allelic imbalance in Drosophila hybrid heads: exons, isoforms, and evolution

scientific article

Buffering of Genetic Regulatory Networks in Drosophila melanogaster.

scientific article published on 18 May 2016

Carotid endarterectomy and race: do clinical indications and patient preferences account for differences?

scientific article published on 01 December 2002

Changes in skeletal muscle gene expression following clenbuterol administration

scientific article

Circumventing multiple testing: a multilocus Monte Carlo approach to testing for association

scientific article published on 01 July 2000

Cis and trans regulatory effects contribute to natural variation in transcriptome of Drosophila melanogaster

scientific article published on 12 November 2007

Combining mapping and arraying: An approach to candidate gene identification.

scientific article

Common pattern of evolution of gene expression level and protein sequence in Drosophila

scientific article published on 19 March 2004

Comparison between NuGEN's WT-Ovation Pico and one-direct amplification systems.

scientific article

Comprehensive analysis of the KSHV MiRNA targetome by Ago-HITS-CLIP.

scientific article

Consistent errors in first strand cDNA due to random hexamer mispriming

scientific article

Correction: Ago HITS-CLIP Expands Understanding of Kaposi's Sarcoma-associated Herpesvirus miRNA Function in Primary Effusion Lymphomas

scientific article published on 28 March 2013

Correction: Plants Know Where It Hurts: Root and Shoot Jasmonic Acid Induction Elicit Differential Responses in Brassica oleracea.

scientific article

Cross-species hybridisation of pig RNA to human nylon microarrays

scientific article

Data: the foundation of science

scientific article

Defining gene and QTL networks.

scientific article published on 03 February 2009

Dementia with Lewy bodies and Alzheimer's disease

scientific article published in December 2001

Detection and localization of a single binary trait locus in experimental populations

scientific article published on 01 August 2001

Differential expression of genes important for adaptation in Capsella bursa-pastoris (Brassicaceae)

article

Differential gene expression in response to hydrogen peroxide and the putative PerR regulon of Synechocystis sp. strain PCC 6803.

scientific article

Direct Testing for Allele-Specific Expression Differences Between Conditions

scientific article published on 22 November 2017

Direct mapping of density response in a population of B73 × Mo17 recombinant inbred lines of maize (Zea Mays L.)

article

Disability fingerprints: patterns of disability in spinal cord injury and multiple sclerosis differ

scientific article published in December 1999

Early onset baldness and prostate cancer risk

scientific article

Elevated ozone reduces photosynthetic carbon gain by accelerating leaf senescence of inbred and hybrid maize in a genotype-specific manner

scientific article

Epistasis: obstacle or advantage for mapping complex traits?

scientific article

Event Analysis: Using Transcript Events To Improve Estimates of Abundance in RNA-seq Data

scientific article published on 30 August 2018

Evidence for an evolutionarily conserved interaction between cell wall biosynthesis and flowering in maize and sorghum

scientific article

Evolution of gene expression in the Drosophila olfactory system

scientific article published on 23 February 2008

Expression of defense genes in Drosophila evolves under a different selective regime from expression of other genes

scientific article

Expression profile analysis of wild-type and fcc1 mutant strains of Fusarium verticillioides during fumonisin biosynthesis

scientific article published in June 2004

Facilitating Discovery: The Role of Society Journals in Collaborative Science ⬇️

scientific article published on February 1, 2012

Facilitating discovery: the role of society journals in collaborative science

scientific article published on February 2012

Factors considered important at the end of life by patients, family, physicians, and other care providers

scientific article published in November 2000

Fatal outcome of bacteraemic patients caused by infection with staphylokinase-deficient Staphylococcus aureus strains

scientific article published in October 2003

Fibrinogen binding is affected by amino acid substitutions in C-terminal repeat region of fibronectin binding protein A

scientific article published on 12 August 2019

GAIT-GM integrative cross-omics analyses reveal cholinergic defects in a C. elegans model of Parkinson’s disease

scientific article published on 16 July 2021

GENETICS and G3: community-driven science, community-driven journals

scientific article (publication date: September 2014)

GENETICS and G3: community-driven science, community-driven journals

scientific article (publication date: 18 September 2014)

Generalized shrinkage F-like statistics for testing an interaction term in gene expression analysis in the presence of heteroscedasticity.

scientific article published on November 2011

Genetic architecture of two fitness-related traits in Drosophila melanogaster: ovariole number and thorax length.

scientific article published in November 2005

Genetic variation in the Yolk protein expression network of Drosophila melanogaster: sex-biased negative correlations with longevity

scientific article

Genome-wide transcription profile of field- and laboratory-selected dichlorodiphenyltrichloroethane (DDT)-resistant Drosophila

scientific article

Genomic scale profiling of nutrient and trace elements in Arabidopsis thaliana

scientific article

Genotype-phenotype mapping in a post-GWAS world.

scientific article

Hardy-Weinberg testing for continuous data

scientific article

High-Throughput Phenotyping of Maize Leaf Physiological and Biochemical Traits Using Hyperspectral Reflectance.

scientific article published on 15 November 2016

Identification of co-regulated transcripts affecting male body size in Drosophila

scientific article

In search of a good death: observations of patients, families, and providers

scientific article

In vitro resistance to thrombin-induced platelet microbicidal protein in isolates of Staphylococcus aureus from endocarditis patients correlates with an intravascular device source

scientific article published on 08 September 2000

Incidence of stroke and season of the year: evidence of an association

scientific article published in September 2000

Intersection tests for single marker QTL analysis can be more powerful than two marker QTL analysis

scientific article

LANA binds to multiple active viral and cellular promoters and associates with the H3K4methyltransferase hSET1 complex

scientific article (publication date: July 2014)

Leveraging biological replicates to improve analysis in ChIP-seq experiments

scientific article published on 31 January 2014

Male-specific Fruitless isoforms have different regulatory roles conferred by distinct zinc finger DNA binding domains

scientific article

Mapping density response in maize: a direct approach for testing genotype and treatment interactions.

scientific article

Mapping reciprocal effects and interactions with plant density stress in Zea mays L

scientific article published on 02 May 2007

Maximizing the motivational impact of feedback of lung cancer susceptibility on smokers' desire to quit.

scientific article published in July 2000

Measuring Patient Expectations

scientific article published on 01 January 2001

Microarray analysis of the genome-wide response to iron deficiency and iron reconstitution in the cyanobacterium Synechocystis sp. PCC 6803.

scientific article

Model selection in binary trait locus mapping

scientific article

Natural genetic variation in transcriptome reflects network structure inferred with major effect mutations: insulin/TOR and associated phenotypes in Drosophila melanogaster

scientific article

Nematode-induced changes of transporter gene expression in Arabidopsis roots.

scientific article

Neurons That Underlie Drosophila melanogaster Reproductive Behaviors: Detection of a Large Male-Bias in Gene Expression in fruitless-Expressing Neurons

scientific article published on 31 May 2016

Neuropathological and neuropsychological changes in "normal" aging: evidence for preclinical Alzheimer disease in cognitively normal individuals

scientific article published in December 1998

Partitioning transcript variation in Drosophila: abundance, isoforms, and alleles

scientific article published on November 2011

Pathogens and antimicrobial susceptibility profiles in critically ill patients with bloodstream infections: a descriptive study

scientific article published on 13 October 2016

Patient-Centered Research Abstracts: In Search of a Good Death: Attitudes of Patients, Family Members and Health Care Professionals.

scientific article

Persistent bacteremia due to methicillin-resistant Staphylococcus aureus infection is associated with agr dysfunction and low-level in vitro resistance to thrombin-induced platelet microbicidal protein

scientific article

Phenotypic plasticity in cell walls of maize brown midrib mutants is limited by lignin composition.

scientific article

Plants know where it hurts: root and shoot jasmonic acid induction elicit differential responses in Brassica oleracea

scientific article (publication date: 2013)

Polymorphisms in fibronectin binding protein A of Staphylococcus aureus are associated with infection of cardiovascular devices

scientific article published on 24 October 2011

Potential associations between hematogenous complications and bacterial genotype in Staphylococcus aureus infection

scientific article

Potential associations between severity of infection and the presence of virulence-associated genes in clinical strains of Staphylococcus aureus

scientific article

Powdery mildew induces defense-oriented reprogramming of the transcriptome in a susceptible but not in a resistant grapevine.

scientific article

Presence of arachidonoyl-carnitine is associated with adverse cardiometabolic responses in hypertensive patients treated with atenolol

scientific article published on 15 September 2016

Prognostic significance of molecular genetic aberrations on chromosome segment 11p15.5 in non-small-cell lung cancer

scientific article published on March 2002

Purification of transcripts and metabolites from Drosophila heads

scientific article published on 15 March 2013

RNA-seq analysis of impact of PNN on gene expression and alternative splicing in corneal epithelial cells

scientific article published on 16 January 2016

RNA-seq: technical variability and sampling.

scientific article

Race, presenting signs and symptoms, use of carotid artery imaging, and appropriateness of carotid endarterectomy

scientific article published on 01 July 1999

Racial variation in wanting and obtaining mental health services among women veterans in a primary care clinic

scientific article published in May 2000

Rater agreement and utility of the mutagen-induced chromosome damage assay

scientific article published on 01 January 2001

Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression

scientific article published on 10 August 2009

SHH Protein Variance in the Limb Bud Is Constrained by Feedback Regulation and Correlates with Altered Digit Patterning.

scientific article published on 27 January 2017

SOLiD sequencing of four Vibrio vulnificus genomes enables comparative genomic analysis and identification of candidate clade-specific virulence genes

scientific article

Setting the Standard: A Special Focus on Genomic Selection in GENETICS and G3 ⬇️

scientific article published on April 1, 2012

Setting the Standard: A Special Focus on Genomic Selection in GENETICS and G3.

scientific article published on April 2012

Sex- and segment-specific modulation of gene expression profiles in Drosophila.

scientific article

Sex-specific expression of alternative transcripts in Drosophila.

scientific article published on 25 August 2006

Sex-specific splicing in Drosophila: widespread occurrence, tissue specificity and evolutionary conservation

scientific article

Simpler mode of inheritance of transcriptional variation in male Drosophila melanogaster

scholarly article

Successful range-expanding plants experience less above-ground and below-ground enemy impact

scientific article

The Chemical Interactions Underlying Tomato Flavor Preferences

scientific article (publication date: June 2012)

The Effect of Inadequate Initial Empiric Antimicrobial Treatment on Mortality in Critically Ill Patients with Bloodstream Infections: A Multi-Centre Retrospective Cohort Study

scientific article

The Wright stuff: reimagining path analysis reveals novel components of the sex determination hierarchy in Drosophila melanogaster

scientific article published on 4 September 2015

The effect of orchiectomy on lung cancer survival

scientific article published on 01 November 1999

The maize Brown midrib1 locus affects cell wall composition and plant development in a dose-dependent manner

scientific article published on 01 June 2002

The reliability of a self-reported measure of disease, impairment, and function in persons with spinal cord dysfunction

scientific article published on April 1998

The validity in persons with spinal cord injury of a self-reported functional measure derived from the functional independence measure

scientific article published in March 1999

Time to flowering in brown midrib mutants of maize: an alternative approach to the analysis of developmental traits

scientific article published in August 1999

Transcriptional network structure has little effect on the rate of regulatory evolution in yeast

scientific article

Transcriptome profiling of embryonic development rate in rainbow trout advanced backcross introgression lines

scientific article published on 30 March 2010

Uncovering hidden genetic variation in photosynthesis of field-grown maize under ozone pollution

scientific article published on 01 October 2019

Understanding racial variation in the use of carotid endarterectomy: the role of aversion to surgery

scientific article published in January 1998

Using Genotyping by Sequencing to Map Two Novel Anthracnose Resistance Loci in Sorghum bicolor

scientific article published on 18 May 2016

Using alpha wisely: improving power to detect multiple QTL

scientific article published on 12 February 2004

Using mating designs to uncover QTL and the genetic architecture of complex traits

scientific article published on 01 February 2006

Validation of a Trauma Questionnaire in veteran women.

scientific article

Variable selection in omics data: A practical evaluation of small sample sizes.

scientific article published on 21 June 2018

What the X has to do with it: differences in regulatory variability between the sexes in Drosophila simulans

scientific article

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