List of works - Konstantin Brodolin

An innovative biologic recycling process of leukoreduction filters to produce active human antimicrobial peptides

scientific article

Antibiotics trapping transcription initiation intermediates: To melt or to bend, what's first?

scientific article published on March 2011

Characteristics of σ-dependent pausing by RNA polymerases from Escherichia coli and Thermus aquaticus

scientific article published in October 2011

Conformational heterogeneity and bubble dynamics in single bacterial transcription initiation complexes.

scientific article published on 21 November 2017

Differences in contacts of RNA polymerases from Escherichia coli and Thermus aquaticus with lacUV5 promoter are determined by core-enzyme of RNA polymerase.

scientific article

Differential melting of the transcription start site associated with changes in RNA polymerase-promoter contacts in initiating transcription complexes.

scientific article

Frequency and characterisation of spontaneous lipiarmycin-resistant Enterococcus faecalis mutants selected in vitro

scientific article published on 15 August 2009

HoxB domain induction silences DNA replication origins in the locus and specifies a single origin at its boundary.

scientific article published on 14 July 2006

Identification of RNA polymerase beta' subunit segment contacting the melted region of the lacUV5 promoter

scientific article published on February 2000

In Xenopus egg extracts, DNA replication initiates preferentially at or near asymmetric AT sequences

scientific article published on 23 June 2008

Mycobacterium RbpA cooperates with the stress-response σB subunit of RNA polymerase in promoter DNA unwinding

scientific article published on 13 August 2014

Mycobacterium tuberculosis RbpA protein is a new type of transcriptional activator that stabilizes the σ A -containing RNA polymerase holoenzyme ⬇️

scientific article published on May 8, 2012

Myxopyronin: a punch in the jaws of bacterial RNA polymerase.

scientific article

Pausing controls branching between productive and non-productive pathways during initial transcription in bacteria.

scientific article published on 16 April 2018

RNA Polymerase Pausing during Initial Transcription

scientific article published on 03 September 2016

RbpA relaxes promoter selectivity of M. tuberculosis RNA polymerase

scholarly article by Ayyappasamy Sudalaiyadum Perumal et al published 8 August 2018 in Nucleic Acids Research

Region 4 of the RNA polymerase σ subunit counteracts pausing during initial transcription

scientific article published on 30 December 2020

Regions 1.2 and 3.2 of the RNA Polymerase σ Subunit Promote DNA Melting and Attenuate Action of the Antibiotic Lipiarmycin.

scientific article published on 24 December 2015

Remodeling of the sigma70 subunit non-template DNA strand contacts during the final step of transcription initiation.

scientific article

Single-molecule analysis reveals the mechanism of transcription activation in M. tuberculosis.

scientific article

Specification of a DNA replication origin by a transcription complex.

scientific article

Structural transitions in the transcription elongation complexes of bacterial RNA polymerase during σ-dependent pausing.

scientific article

The sigma 70 subunit of RNA polymerase induces lacUV5 promoter-proximal pausing of transcription

scientific article

The transcription inhibitor lipiarmycin blocks DNA fitting into the RNA polymerase catalytic site

scientific article published on 18 June 2010

[Mutations in beta'-subunit of the Escherichia coli RNA-polymerase influence interaction with downstream duplex DNA in the elongation complex]

scientific article published on 01 October 2002

[Study of the structure of Escherichia coli RNA polymerase and its complex with the lacUV5-promotor using protein-protein and DNA-protein crosslinks, formed by formaldehyde]

scientific article

List of works by Konstantin Brodolin

An innovative biologic recycling process of leukoreduction filters to produce active human antimicrobial peptides

Antibiotics trapping transcription initiation intermediates: To melt or to bend, what's first?

Characteristics of σ-dependent pausing by RNA polymerases from Escherichia coli and Thermus aquaticus

Conformational heterogeneity and bubble dynamics in single bacterial transcription initiation complexes.

Differences in contacts of RNA polymerases from Escherichia coli and Thermus aquaticus with lacUV5 promoter are determined by core-enzyme of RNA polymerase.

Differential melting of the transcription start site associated with changes in RNA polymerase-promoter contacts in initiating transcription complexes.

Frequency and characterisation of spontaneous lipiarmycin-resistant Enterococcus faecalis mutants selected in vitro

HoxB domain induction silences DNA replication origins in the locus and specifies a single origin at its boundary.

Identification of RNA polymerase beta' subunit segment contacting the melted region of the lacUV5 promoter

In Xenopus egg extracts, DNA replication initiates preferentially at or near asymmetric AT sequences

Mycobacterium RbpA cooperates with the stress-response σB subunit of RNA polymerase in promoter DNA unwinding

Mycobacterium tuberculosis RbpA protein is a new type of transcriptional activator that stabilizes the σ A -containing RNA polymerase holoenzyme ⬇️

Myxopyronin: a punch in the jaws of bacterial RNA polymerase.

Pausing controls branching between productive and non-productive pathways during initial transcription in bacteria.

RNA Polymerase Pausing during Initial Transcription

RbpA relaxes promoter selectivity of M. tuberculosis RNA polymerase

Region 4 of the RNA polymerase σ subunit counteracts pausing during initial transcription

Regions 1.2 and 3.2 of the RNA Polymerase σ Subunit Promote DNA Melting and Attenuate Action of the Antibiotic Lipiarmycin.

Remodeling of the sigma70 subunit non-template DNA strand contacts during the final step of transcription initiation.

Single-molecule analysis reveals the mechanism of transcription activation in M. tuberculosis.

Specification of a DNA replication origin by a transcription complex.

Structural transitions in the transcription elongation complexes of bacterial RNA polymerase during σ-dependent pausing.

The sigma 70 subunit of RNA polymerase induces lacUV5 promoter-proximal pausing of transcription

The transcription inhibitor lipiarmycin blocks DNA fitting into the RNA polymerase catalytic site

[Mutations in beta'-subunit of the Escherichia coli RNA-polymerase influence interaction with downstream duplex DNA in the elongation complex]

[Study of the structure of Escherichia coli RNA polymerase and its complex with the lacUV5-promotor using protein-protein and DNA-protein crosslinks, formed by formaldehyde]