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List of works by Gabriel Krouk

A Systems View of Responses to Nutritional Cues in Arabidopsis: Toward a Paradigm Shift for Predictive Network Modeling

article

A framework integrating plant growth with hormones and nutrients

scientific article

A map of cell type-specific auxin responses

scientific article

A system biology approach highlights a hormonal enhancer effect on regulation of genes in a nitrate responsive "biomodule".

scientific article published on 6 June 2009

A systems approach uncovers restrictions for signal interactions regulating genome-wide responses to nutritional cues in Arabidopsis

scientific article

ABA transport and transporters.

scientific article published on March 2013

AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip.

scientific article

Combinatorial interaction network of transcriptomic and phenotypic responses to nitrogen and hormones in the Arabidopsis thaliana root.

scientific article

Finding a nitrogen niche: a systems integration of local and systemic nitrogen signalling in plants

scientific article published on 24 June 2014

GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways

scientific article published on 01 May 2021

Gene regulatory networks in plants: learning causality from time and perturbation

scientific article published on 27 June 2013

GeneCloud Reveals Semantic Enrichment in Lists of Gene Descriptions

scientific article published on 21 February 2015

Getting to the Root of Plant Mineral Nutrition: Combinatorial Nutrient Stresses Reveal Emergent Properties

scientific article published on 18 April 2019

HRS1/HHOs GARP transcription factors and reactive oxygen species are regulators of Arabidopsis nitrogen starvation response

High nitrogen insensitive 9 (HNI9)-mediated systemic repression of root NO3- uptake is associated with changes in histone methylation

scientific article

Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis

scientific article

Hormones and nitrate: a two-way connection.

scientific article published on 22 March 2016

Identification of Molecular Integrators Shows that Nitrogen Actively Controls the Phosphate Starvation Response in Plants

scientific article published on 14 March 2019

Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots

scientific article

Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture

scientific article published on 26 August 2013

Iron and ROS control of the DownSTream mRNA decay pathway is essential for plant fitness.

scientific article published on 23 September 2011

LPCAT1 controls phosphate homeostasis in a zinc-dependent manner.

scientific article published on 17 February 2018

Long-distance nitrate signaling displays cytokinin dependent and independent branches

scientific article published on 23 February 2016

Modeling the global effect of the basic-leucine zipper transcription factor 1 (bZIP1) on nitrogen and light regulation in Arabidopsis.

scientific article

Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1.

scientific article published on 2 March 2015

Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions

scientific article published on 05 April 2019

Nitrate 2020: Thirty years from transport to signaling networks

scientific article published on 13 March 2020

Nitrate Controls Root Development through Posttranscriptional Regulation of the NRT1.1/NPF6.3 Transporter/Sensor

scientific article published on 19 August 2016

Nitrate Transport, Sensing, and Responses in Plants.

scientific article published on 19 May 2016

Nitrate signaling: adaptation to fluctuating environments.

scientific article published on 21 January 2010

Nitrate signalling: Calcium bridges the nitrate gap

scientific article published on 19 June 2017

Nitrate transceptor(s) in plants

scientific article published on 14 January 2011

Nitrate-regulated auxin transport by NRT1.1 defines a mechanism for nutrient sensing in plants.

scientific article published in June 2010

Nitrogen and Phosphorus interactions in plants: from agronomic to physiological and molecular insights

scientific article published on 31 August 2020

Nitrogen economics of root foraging: transitive closure of the nitrate-cytokinin relay and distinct systemic signaling for N supply vs. demand.

scientific article published on 24 October 2011

Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics

scientific article published on 8 September 2016

Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate

scientific article published on 23 December 2010

Regulation of the high-affinity NO3- uptake system by NRT1.1-mediated NO3- demand signaling in Arabidopsis

scientific article published on 22 September 2006

Responses to Systemic Nitrogen Signaling in Arabidopsis Roots Involve -Zeatin in Shoots

article

Reverse engineering highlights potential principles of large gene regulatory network design and learning.

scientific article

Root Responses to Heterogeneous Nitrate Availability are Mediated by trans-Zeatin in Arabidopsis Shoots

article

RootScape: a landmark-based system for rapid screening of root architecture in Arabidopsis

scientific article published on 18 January 2013

TARGET: a transient transformation system for genome-wide transcription factor target discovery.

scientific article published on 18 January 2013

The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate

scientific article published on 19 May 2020

The Chromatin Factor HNI9 and ELONGATED HYPOCOTYL5 Maintain ROS Homeostasis under High Nitrogen Provision

scientific article published on 01 March 2019

The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology.

scientific article published in December 2017

The primary nitrate response: a multifaceted signalling pathway

scientific article

The world according to GARP transcription factors.

scientific article published on 9 August 2017

TransDetect Identifies a New Regulatory Module Controlling Phosphate Accumulation.

scientific article

Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade

scientific article published on 02 March 2020

Un mécanisme original de perception d’un ion minéral (le nitrate)

iPlant Systems Biology (iPSB): An International Network Hub in the Plant Community

scientific article published on 21 May 2019

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