List of works by María José Nueda

ARSyN: a method for the identification and removal of systematic noise in multifactorial time course microarray experiments

scientific article published on 14 November 2011

Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package

scientific article

Discovering gene expression patterns in time course microarray experiments by ANOVA-SCA.

scientific article published on 22 May 2007

Functional assessment of time course microarray data

scientific article (publication date: 16 June 2009)

High-throughput functional annotation and data mining with the Blast2GO suite

scientific article

Identification and visualisation of differential isoform expression in RNA-seq time series

scientific article published on 14 September 2017

Neurospora crassa transcriptomics reveals oxidative stress and plasma membrane homeostasis biology genes as key targets in response to chitosan

scientific article published on 23 December 2015

Next maSigPro: updating maSigPro bioconductor package for RNA-seq time series

scientific article

Pathway network inference from gene expression data

scientific article

Serial Expression Analysis: a web tool for the analysis of serial gene expression data

scientific article

Transcriptomic analysis of Citrus clementina mandarin fruits maturation reveals a MADS-box transcription factor that might be involved in the regulation of earliness

scientific article published on 31 January 2019

maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments

scientific article published on 15 February 2006

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