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List of works by Marta Pasenkiewicz-Gierula

A computer model of a polyunsaturated monogalactolipid bilayer

scientific article published on 5 September 2015

Adduct formation between the cupric site of phenylalanine hydroxylase from Chromobacterium violaceum and 6,7-dimethyltetrahydropterin

scientific article published on 01 July 1987

Analysis of the ESR spectrum of synthetic dopa melanin

scientific article published on 01 December 1986

Assessing gastric toxicity of xanthone derivatives of anti-inflammatory activity using simulation and experimental approaches

scientific article published on 5 November 2016

Asymmetric Spontaneous Intercalation of Lutein into a Phospholipid Bilayer, a Computational Study

Chirality affects cholesterol-oxysterol association in water, a computational study

scientific article published in 2021

Cholesterol effects on a mixed-chain phosphatidylcholine bilayer: a molecular dynamics simulation study

scientific article published on 7 November 2005

Cholesterol effects on the phospholipid condensation and packing in the bilayer: a molecular simulation study

scientific article published in July 2001

Cholesterol-sphingomyelin interactions: a molecular dynamics simulation study

scientific article

Cis and trans unsaturated phosphatidylcholine bilayers: A molecular dynamics simulation study

article

Communication: consistent picture of lateral subdiffusion in lipid bilayers: molecular dynamics simulation and exact results

scientific article published in October 2011

Comparative Model Studies of Gastric Toxicity of Nonsteroidal Anti-Inflammatory Drugs

article

Comparative computer simulation study of cholesterol in hydrated unary and binary lipid bilayers and in an anhydrous crystal

scientific article published on 12 July 2013

Computer modelling studies of the bilayer/water interface

scientific article published on 26 January 2016

Data for molecular dynamic simulations in the OPLSAA force field: Partial charges of cholesterol, C7-hydroxycholesterol and C7-hydroperoxycholesterol, torsional parameters for the hydroperoxy group of C7-hydroperoxycholesterol

scientific article published in December 2021

Effect of Double Bond Position on Lipid Bilayer Properties: Insight through Atomistic Simulations

article by Hector Martinez-Seara et al published September 2007 in Journal of Physical Chemistry

Effects of a carane derivative local anesthetic on a phospholipid bilayer studied by molecular dynamics simulation

scientific article published on August 2003

Effects of epicholesterol on the phosphatidylcholine bilayer: a molecular simulation study

scientific article published on March 2003

Effects of phospholipid unsaturation on the bilayer nonpolar region: a molecular simulation study

scientific article published in November 2003

Effects of the Lipid Bilayer Phase State on the Water Membrane Interface

Fitmunk: improving protein structures by accurate, automatic modeling of side-chain conformations

scientific article

Formation of cholesterol Bilayer Domains Precedes Formation of Cholesterol Crystals in Membranes Made of the Major Phospholipids of Human Eye Lens Fiber Cell Plasma Membranes

scientific article published on 03 September 2019

High Cholesterol/Low Cholesterol: Effects in Biological Membranes: A Review

scientific article

Hypothetical Pathway for Formation of Cholesterol Microcrystals Initiating the Atherosclerotic Process

scientific article published on 30 June 2020

Influence of phospholipid unsaturation on the cholesterol distribution in membranes

scientific article published in October 1991

Interplay of unsaturated phospholipids and cholesterol in membranes: effect of the double-bond position

scientific article

Inverse hexagonal phase of poly-unsaturated monogalactolipid: A computer model and analysis

scientific article published in September 2019

Is the cholesterol bilayer domain a barrier to oxygen transport into the eye lens?

scientific article published on 25 October 2017

Is the tilt of the lipid head group correlated with the number of intermolecular interactions at the bilayer interface?

scientific article published on 20 April 2018

Lateral diffusion of lipids in membranes by pulse saturation recovery electron spin resonance

scientific article

Lutein and Zeaxanthin in the Lipid Bilayer-Similarities and Differences Revealed by Computational Studies

scientific article published in 2021

Molecular dynamics of 1-palmitoyl-2-oleoylphosphatidylcholine membranes containing transmembrane alpha-helical peptides with alternating leucine and alanine residues

scientific article published in April 2003

Molecular dynamics simulations of charged and neutral lipid bilayers: treatment of electrostatic interactions

scientific article published on January 1, 2003

Molecular dynamics study of 4-OH-phenylacetyl- D -Y(Me)FQNRPR-NH 2 selectivity to V1a receptor

scientific article published on 07 October 2003

Monte Carlo and strategic fits of simulations to exponential signals

Multifrequency ESR of copper(II)-(His)n (His = histidine). 1. Immobile phase

scientific article published in August 1986

Multifrequency ESR with Fourier analysis of copper(II)-(histidine)n. 2. Mobile phase

scientific article published in March 1987

Network of lipid interconnections at the interfaces of galactolipid and phospholipid bilayers

scientific article published in January 2020

Non-polar interactions between cholesterol and phospholipids: a molecular dynamics simulation study

scientific article published in February 2004

Nonpolar interactions between trans-membrane helical EGF peptide and phosphatidylcholines, sphingomyelins and cholesterol. Molecular dynamics simulation studies

scientific article published in April 2008

Ordering effects of cholesterol and its analogues

scientific article published on 10 September 2008

Oriented Self-Association of Copper(II) Tetraphenylporphine in Liquid-Crystalline Lipid Bilayer Membranes: An EPR Study

article

Phosphatidylethanolamine-phosphatidylglycerol bilayer as a model of the inner bacterial membrane

scientific article published on 19 November 2004

Properties of the Membrane Binding Component of Catechol-O-methyltransferase Revealed by Atomistic Molecular Dynamics Simulations

article

Properties of water hydrating the galactolipid and phospholipid bilayers: a molecular dynamics simulation study

scientific article published on 20 August 2015

Pseudo field modulation in EPR spectroscopy

article published in 1990

Refined OPLS all-atom force field for saturated phosphatidylcholine bilayers at full hydration

scientific article published on 18 April 2014

Refined OPLS all-atom force field parameters for n-pentadecane, methyl acetate, and dimethyl phosphate

scientific article published on 11 December 2013

Replacing the cholesterol hydroxyl group with the ketone group facilitates sterol flip-flop and promotes membrane fluidity

scientific article published on 25 January 2008

Rotational diffusion of a steroid molecule in phosphatidylcholine membranes: effects of alkyl chain length, unsaturation, and cholesterol as studied by a spin-label method

scientific article published on 01 June 1988

Saturation with cholesterol increases vertical order and smoothes the surface of the phosphatidylcholine bilayer: a molecular simulation study

scientific article

Sensitivity analysis for liquid-phase multifrequency EPR spectra of Cu2+ square-planar complexes

Simulation of Q-Band ESR spectra of immobilized spin labels

Spin-label studies on phosphatidylcholine-cholesterol membranes: effects of alkyl chain length and unsaturation in the fluid phase

scientific article published in 1986

Spin-label studies on phosphatidylcholine-cholesterol membranes: effects of alkyl chain length and unsaturation in the fluid phase

Stereochemistry of terpene derivatives. Part 3: Hydrolytic kinetic resolution as a convenient approach to chiral aminohydroxyiminocaranes with local anaesthetic activity

Strong preferences of dopamine and l-dopa towards lipid head group: importance of lipid composition and implication for neurotransmitter metabolism

article

Structural properties of the water/membrane interface of a bilayer built of the E. coli lipid A.

scientific article published on 28 April 2015

Study of PEGylated Lipid Layers as a Model for PEGylated Liposome Surfaces: Molecular Dynamics Simulation and Langmuir Monolayer Studies

article

The behaviour of beta-carotene in the phosphatidylcholine bilayer as revealed by a molecular simulation study

scientific article published on 19 February 2005

The dynamics of water at the phospholipid bilayer surface: a molecular dynamics simulation study

article

Tilt: Major Factor in Sterols' Ordering Capability in Membranes

Topologies, structures and parameter files for lipid simulations in GROMACS with the OPLS-aa force field: DPPC, POPC, DOPC, PEPC, and cholesterol

scientific article

Type 2-depleted fungal laccase

scientific article published on July 1988

Water isotope effect on the phosphatidylcholine bilayer properties: a molecular dynamics simulation study.

scientific article published in February 2009

What happens if cholesterol is made smoother: importance of methyl substituents in cholesterol ring structure on phosphatidylcholine-sterol interaction

scientific article published on 9 February 2007

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