List of works - Michael Habeck

A blind deconvolution approach for improving the resolution of cryo-EM density maps

scientific article published on March 2011

A probabilistic model for secondary structure prediction from protein chemical shifts

scientific article

A probabilistic network model for structural transitions in biomolecules

article

A unifying probabilistic framework for analyzing residual dipolar couplings

scientific article published on 20 December 2007

ARIA2: automated NOE assignment and data integration in NMR structure calculation

scientific article

ARIA: automated NOE assignment and NMR structure calculation

scientific article (publication date: 22 January 2003)

Accurate NMR structures through minimization of an extended hybrid energy.

scientific article published in September 2008

Architecture of the flexible tail tube of bacteriophage SPP1

scientific article published on 13 November 2020

Autonomous reconstruction and segmentation of tomographic data

scientific article

Bayesian Reconstruction of the Density of States

scientific article published in Physical Review Letters

Bayesian approach to inverse statistical mechanics

scientific article published on 9 May 2014

Bayesian estimation of Karplus parameters and torsion angles from three-bond scalar couplings constants.

scientific article published in November 2005

Bayesian estimation of free energies from equilibrium simulations

scientific article published on 4 September 2012

Bayesian inference applied to macromolecular structure determination

scientific article

Bayesian inference of chromatin structure ensembles from population-averaged contact data

scientific article published on 19 March 2020

Bayesian inference of initial models in cryo-electron microscopy using pseudo-atoms

scientific article

Bayesian weighting of statistical potentials in NMR structure calculation

scientific article

CSB: a Python framework for structural bioinformatics

scientific article

Calibration of Boltzmann distribution priors in Bayesian data analysis

scientific article

Combining computational modeling with sparse and low-resolution data.

scientific article published on 14 January 2011

Comparative analysis of structural and dynamic properties of the loaded and unloaded hemophore HasA: functional implications

scientific article

Comparison of the kinetics of different Markov models for ligand binding under varying conditions

scientific article

Confidence-guided local structure prediction with HHfrag

scientific article

Correction of spin diffusion during iterative automated NOE assignment

scientific article published in April 2004

Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution

scientific article

Data-driven coarse graining of large biomolecular structures

scientific article

Error distribution derived NOE distance restraints.

scientific article published in August 2006

Graphical analysis of NMR structural quality and interactive contact map of NOE assignments in ARIA

scientific article

HHfrag: HMM-based fragment detection using HHpred

scientific article

ISD: a software package for Bayesian NMR structure calculation

scientific article published on 28 February 2008

Inferential NMR/X-ray-based structure determination of a dibenzo[a,d]cycloheptenone inhibitor-p38α MAP kinase complex in solution

scientific article

Inferential Structure Determination of Chromosomes from Single-Cell Hi-C Data

scientific article (publication date: December 2016)

Inferential structure determination.

scientific article published in July 2005

Influence of different assignment conditions on the determination of symmetric homodimeric structures with ARIA.

scientific article

Is the C-terminal insertional signal in Gram-negative bacterial outer membrane proteins species-specific or not?

scientific article

Kinetics or equilibrium? A commentary on a recent simulation study of semiochemical dose-response curves of insect olfactory sensing

scientific article published in December 2014

Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome

scientific article

Membrane-protein structure determination by solid-state NMR spectroscopy of microcrystals

scientific article

Mixture models for protein structure ensembles.

scientific article

Modeling errors in NOE data with a log-normal distribution improves the quality of NMR structures

scientific article

NMR in the SPINE Structural Proteomics project.

scientific article

Replica-Exchange Monte Carlo Scheme for Bayesian Data Analysis

scientific article published in Physical Review Letters

Robust probabilistic superposition and comparison of protein structures

scientific article

Statistical mechanics analysis of sparse data ⬇️

scientific article published on September 30, 2010

Structural and functional studies of titin’s fn3 modules reveal conserved surface patterns and binding to myosin S1 - a possible role in the frank-starling mechanism of the heart

article by Claudia Muhle-Goll et al published October 2001 in Journal of Molecular Biology

Structure and activity of the N-terminal substrate recognition domains in proteasomal ATPases

scientific article

Structure and evolution of N-domains in AAA metalloproteases

scientific article

Structure of the human voltage-dependent anion channel

scientific article

Structure validation of the Josephin domain of ataxin-3: conclusive evidence for an open conformation.

scientific article published on 10 November 2006

Structure-activity analysis of the dermcidin-derived peptide DCD-1L, an anionic antimicrobial peptide present in human sweat

scientific article published on 18 January 2012

Structures of the human and Drosophila 80S ribosome

scientific article

The CCPN project: an interim report on a data model for the NMR community

scientific article

The GD box: a widespread noncontiguous supersecondary structural element

scientific article

Weighting of experimental evidence in macromolecular structure determination

scholarly article

List of works by Michael Habeck

A blind deconvolution approach for improving the resolution of cryo-EM density maps

A probabilistic model for secondary structure prediction from protein chemical shifts

A probabilistic network model for structural transitions in biomolecules

A unifying probabilistic framework for analyzing residual dipolar couplings

ARIA2: automated NOE assignment and data integration in NMR structure calculation

ARIA: automated NOE assignment and NMR structure calculation

Accurate NMR structures through minimization of an extended hybrid energy.

Architecture of the flexible tail tube of bacteriophage SPP1

Autonomous reconstruction and segmentation of tomographic data

Bayesian Reconstruction of the Density of States

Bayesian approach to inverse statistical mechanics

Bayesian estimation of Karplus parameters and torsion angles from three-bond scalar couplings constants.

Bayesian estimation of free energies from equilibrium simulations

Bayesian inference applied to macromolecular structure determination

Bayesian inference of chromatin structure ensembles from population-averaged contact data

Bayesian inference of initial models in cryo-electron microscopy using pseudo-atoms

Bayesian weighting of statistical potentials in NMR structure calculation

CSB: a Python framework for structural bioinformatics

Calibration of Boltzmann distribution priors in Bayesian data analysis

Combining computational modeling with sparse and low-resolution data.

Comparative analysis of structural and dynamic properties of the loaded and unloaded hemophore HasA: functional implications

Comparison of the kinetics of different Markov models for ligand binding under varying conditions

Confidence-guided local structure prediction with HHfrag

Correction of spin diffusion during iterative automated NOE assignment

Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution

Data-driven coarse graining of large biomolecular structures

Error distribution derived NOE distance restraints.

Graphical analysis of NMR structural quality and interactive contact map of NOE assignments in ARIA

HHfrag: HMM-based fragment detection using HHpred

ISD: a software package for Bayesian NMR structure calculation

Inferential NMR/X-ray-based structure determination of a dibenzo[a,d]cycloheptenone inhibitor-p38α MAP kinase complex in solution

Inferential Structure Determination of Chromosomes from Single-Cell Hi-C Data

Inferential structure determination.

Influence of different assignment conditions on the determination of symmetric homodimeric structures with ARIA.

Is the C-terminal insertional signal in Gram-negative bacterial outer membrane proteins species-specific or not?

Kinetics or equilibrium? A commentary on a recent simulation study of semiochemical dose-response curves of insect olfactory sensing

Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome

Membrane-protein structure determination by solid-state NMR spectroscopy of microcrystals

Mixture models for protein structure ensembles.

Modeling errors in NOE data with a log-normal distribution improves the quality of NMR structures

NMR in the SPINE Structural Proteomics project.

Replica-Exchange Monte Carlo Scheme for Bayesian Data Analysis

Robust probabilistic superposition and comparison of protein structures

Statistical mechanics analysis of sparse data ⬇️

Structural and functional studies of titin’s fn3 modules reveal conserved surface patterns and binding to myosin S1 - a possible role in the frank-starling mechanism of the heart

Structure and activity of the N-terminal substrate recognition domains in proteasomal ATPases

Structure and evolution of N-domains in AAA metalloproteases

Structure of the human voltage-dependent anion channel

Structure validation of the Josephin domain of ataxin-3: conclusive evidence for an open conformation.

Structure-activity analysis of the dermcidin-derived peptide DCD-1L, an anionic antimicrobial peptide present in human sweat

Structures of the human and Drosophila 80S ribosome

The CCPN project: an interim report on a data model for the NMR community

The GD box: a widespread noncontiguous supersecondary structural element

Weighting of experimental evidence in macromolecular structure determination