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List of works by Yong Kong

A Simple Method for Evaluating Partition Functions of Linear Polymers

article

A note on the quantitative properties of McGhee-von Hippel model

scientific article published in January 2002

A protein interaction map of Drosophila melanogaster

scientific article (publication date: 5 December 2003)

A uniform survey of allele-specific binding and expression over 1000-Genomes-Project individuals

scientific article published on 18 April 2016

Adjusting for background mutation frequency biases improves the identification of cancer driver genes

scientific article published on 16 May 2013

Aging impairs both primary and secondary RIG-I signaling for interferon induction in human monocytes.

scientific article published on 12 December 2017

AlleleSeq: analysis of allele-specific expression and binding in a network framework

scientific article published on 2 August 2011

Alleles of a Polymorphic ETV6 Binding Site in DCDC2 Confer Risk of Reading and Language Impairment

Alleles of a polymorphic ETV6 binding site in DCDC2 confer risk of reading and language impairment

scientific article published on 06 June 2013

An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge.

scientific article

Analysis of genomic variation in non-coding elements using population-scale sequencing data from the 1000 Genomes Project

scientific article (publication date: September 2011)

Asymptotics of the monomer-dimer model on two-dimensional semi-infinite lattices

scientific article published on 30 May 2007

Author Correction: Glycerol phosphate shuttle enzyme GPD2 regulates macrophage inflammatory responses

scientific article published on 01 November 2019

Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologies ⬇️

scientific article published on May 30, 2011

Calculating complexity of large randomized libraries ⬇️

scientific article

Calculation of the reaction field due to off-center point multipoles

Computational Analysis in Cancer Exome Sequencing

article

Construction and maintenance of randomized retroviral expression libraries for transmembrane protein engineering

scientific article

Crystal structures of the Klenow fragment of Thermus aquaticus DNA polymerase I complexed with deoxyribonucleoside triphosphates ⬇️

scientific article published on May 1, 1998

Decoupling Combinatorial Complexity: a Two-Step Approach to Distributions of Runs

article by Yong Kong published 13 December 2018 in Methodology and Computing in Applied Probability

Desynchronization of the molecular clock contributes to the heterogeneity of the inflammatory response

scientific article published on 05 March 2019

Distribution of Runs and Longest Runs

Distributions of positive signals in pyrosequencing ⬇️

scientific article published on 31 May 2013

Dynamic changes in the Streptococcus pneumoniae transcriptome during transition from biofilm formation to invasive disease upon influenza A virus infection

scientific article

Exome sequencing identifies recurrent mutations in NF1 and RASopathy genes in sun-exposed melanomas

scientific article published on 27 July 2015

Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma

scientific article

Exon capture and bulk segregant analysis: rapid discovery of causative mutations using high-throughput sequencing

scientific article

Extension of Goulden–Jackson cluster method on pattern occurrences in random sequences and comparison with Régnier–Szpankowski method

Fluorescence anisotropy studies on the Ku-DNA interaction: anion and cation effects

scientific article published on 28 July 2004

Forward genetics defines Xylt1 as a key, conserved regulator of early chondrocyte maturation and skeletal length

scientific article published on 23 October 2013

Forward genetics identifies Kdf1/1810019J16Rik as an essential regulator of the proliferation-differentiation decision in epidermal progenitor cells ⬇️

scientific journal article

Forward genetics uncovers Transmembrane protein 107 as a novel factor required for ciliogenesis and Sonic hedgehog signaling

scientific journal article

General recurrence theory of ligand binding on a three-dimensional lattice

article published in 1999

Generalized correlation functions and their applications in selection of optimal multiple spaced seeds for homology search

scientific article published in March 2007

Glycerol phosphate shuttle enzyme GPD2 regulates macrophage inflammatory responses

scientific article published on 05 August 2019

Heterologous quaternary structure of CXCL12 and its relationship to the CC chemokine family

scientific article

Integrating sequencing technologies in personal genomics: optimal low cost reconstruction of structural variants

scientific article

Integrative annotation of variants from 1092 humans: application to cancer genomics

scientific article

Intratumoral delivery of RIG-I agonist SLR14 induces robust antitumor responses

scientific article published on 10 October 2019

Ketogenic diet activates protective γδ T cell responses against influenza virus infection

scientific article published on 01 November 2019

Length distribution of sequencing by synthesis: fixed flow cycle model ⬇️

scientific article published on June 12, 2012

Ligand binding on ladder lattices

scientific article published on 01 September 1999

Logarithmic corrections in the free energy of monomer-dimer model on plane lattices with free boundaries

scientific article published on 6 July 2006

MU2A--reconciling the genome and transcriptome to determine the effects of base substitutions

scientific article

Macrophage function in tissue repair and remodeling requires IL-4 or IL-13 with apoptotic cells.

scientific article published on 11 May 2017

Microbial communities of the upper respiratory tract and otitis media in children

scientific article

Monomer-dimer model in two-dimensional rectangular lattices with fixed dimer density

scientific article published on 4 December 2006

Nanoparticles that deliver triplex-forming peptide nucleic acid molecules correct F508del CFTR in airway epithelium

scientific article published on 27 April 2015

Negligible impact of rare autoimmune-locus coding-region variants on missing heritability

scientific article

Note: Solution of one-dimensional self-assembly problem in multiple-component systems with correction of overcounting of non-symmetrical complexes ⬇️

scientific article published on October 21, 2011

Packing dimers on (2p+1) x (2q+1) lattices ⬇️

scientific article published on 9 January 2006

Rare SF3B1 R625 mutations in cutaneous melanoma.

scientific article

Statistical Distributions of Sequencing by Synthesis with Probabilistic Nucleotide Incorporation ⬇️

scholarly article by Yong Kong published in June 2009

Statistical distributions of pyrosequencing ⬇️

scientific article published in January 2009

Streptococcus pneumoniae clonal complex 199: genetic diversity and tissue-specific virulence

scientific article

Streptococcus pneumoniae serotype 6C: an intra- and interclonal complex comparison.

scientific article

Substrate discrimination among mitogen-activated protein kinases through distinct docking sequence motifs

scientific article

The Expectation of Sample Central Moments

Theory of multivalent binding in one and two-dimensional lattices

scientific article published in October 1996

Tissue-specific modifier alleles determine Mertk loss-of-function traits

scientific article published in 2022

Type I interferons instigate fetal demise after Zika virus infection

scientific article published in January 2018

Upper respiratory tract microbial communities, acute otitis media pathogens, and antibiotic use in healthy and sick children

scientific article

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