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List of works by Nikolaus Sonnenschein

A Genome-Scale Metabolic Model for (Bath) Suggests Reduced Efficiency Electron Transfer to the Particulate Methane Monooxygenase

scientific article published on 04 December 2018

A community-driven global reconstruction of human metabolism. ⬇️

scientific article

A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism

scientific article published on 08 August 2019

A network perspective on metabolic inconsistency

scientific article

A topological characterization of medium-dependent essential metabolic reactions

scientific article published on 24 September 2012

Analog regulation of metabolic demand ⬇️

scientific article published on March 15, 2011

Analysis of Pseudomonas putida growth on non-trivial carbon sources using transcriptomics and genome-scale modeling

scientific article published on 22 November 2018

Analysis of genetic variation and potential applications in genome-scale metabolic modeling

scientific article

Artefacts in statistical analyses of network motifs: general framework and application to metabolic networks

scientific article published on 15 August 2012

Cameo: A Python Library for Computer Aided Metabolic Engineering and Optimization of Cell Factories.

scientific article published on 20 March 2018

Combined In-Cell NMR and Simulation Approach to Probe Redox-Dependent Pathway Control

scientific article published on 01 April 2019

Do genome-scale models need exact solvers or clearer standards?

scientific article published on 14 October 2015

Editorial: Current Challenges in Modeling Cellular Metabolism

scientific article published on 26 November 2015

Emergence of Phenotypically Distinct Subpopulations Is a Factor in Adaptation of Recombinant Saccharomyces cerevisiae under Glucose-Limited Conditions

scientific article published in 2022

Engineering an NADPH/NADP+ Redox Biosensor in Yeast.

scientific article published on 15 July 2016

Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways

scientific article

Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance

Genome-wide CRISPRi-based identification of targets for decoupling growth from production

scientific article published on 08 April 2020

Improving Reproducibility in Synthetic Biology

scientific article published on 11 February 2019

Integration of enzymatic data in Bacillus subtilis genome-scale metabolic model improves phenotype predictions and enables in silico design of poly-γ-glutamic acid production strains

scientific article published on 09 January 2019

MARSI: metabolite analogues for rational strain improvement.

scientific article published in July 2018

MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 March 2020

Microbial Methylotrophic Metabolism: Recent Metabolic Modeling Efforts and Their Applications In Industrial Biotechnology

scientific article published on 28 June 2018

OptCouple: Joint simulation of gene knockouts, insertions and medium modifications for prediction of growth-coupled strain designs

article

Optlang: An algebraic modeling language for mathematical optimization

scientific article published on 03 January 2017

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 April 2020

Ranges of control in the transcriptional regulation of Escherichia coli

scientific article

Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0

scientific article published in 2022

Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0

scientific article published on 5 March 2021

Systems biology solutions for biochemical production challenges.

scientific article published on 16 March 2017

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