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List of works by Shu Ishikawa

A free terminal carboxylate group is required for PhrA pentapeptide inhibition of RapA phosphatase

scientific article

A new FtsZ-interacting protein, YlmF, complements the activity of FtsA during progression of cell division in Bacillus subtilis

scientific journal article

A new-generation of Bacillus subtilis cell factory for further elevated scyllo-inositol production

scientific article

A widespread family of bacterial cell wall assembly proteins

scientific article

Bacillus subtilis 5'-nucleotidases with various functions and substrate specificities

scientific article

Bacillus subtilis iolU encodes an additional NADP+-dependent scyllo-inositol dehydrogenase

scientific article published on 3 January 2017

Biochemical characterization of aspartyl phosphate phosphatase interaction with a phosphorylated response regulator and its inhibition by a pentapeptide.

scientific article

Cloning and heterologous expression of the ftfCNC-2(1) gene from Weissella confusa MBFCNC-2(1) as an extracellular active fructansucrase in Bacillus subtilis.

scientific article

Differential binding profiles of StpA in wild-type and h-ns mutant cells: a comparative analysis of cooperative partners by chromatin immunoprecipitation-microarray analysis.

scientific article

Distribution of stable DnaA-binding sites on the Bacillus subtilis genome detected using a modified ChIP-chip method

scientific article published on August 2007

Enhanced dipicolinic acid production during the stationary phase in Bacillus subtilis by blocking acetoin synthesis

scientific article published on 29 June 2015

Essential Bacillus subtilis genes

scientific article

Functional analysis of the protein Veg, which stimulates biofilm formation in Bacillus subtilis.

scientific article published on February 2013

Functions of the Hha and YdgT proteins in transcriptional silencing by the nucleoid proteins, H-NS and StpA, in Escherichia coli

scientific article published on 29 March 2013

Genome-Wide Analysis of ResD, NsrR, and Fur Binding in Bacillus subtilis during Anaerobic Fermentative Growth by In Vivo Footprinting

scientific article published on 24 April 2017

Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation

scientific article published on 3 September 2010

H-NS Facilitates Sequence Diversification of Horizontally Transferred DNAs during Their Integration in Host Chromosomes.

scientific article published on 20 January 2016

High-resolution mapping of in vivo genomic transcription factor binding sites using in situ DNase I footprinting and ChIP-seq

scientific article published on 11 April 2013

Hyperphosphorylation of DegU cancels CcpA-dependent catabolite repression of rocG in Bacillus subtilis.

scientific article

Noc protein binds to specific DNA sequences to coordinate cell division with chromosome segregation

scientific article published on 4 June 2009

RNA polymerase trafficking in Bacillus subtilis cells.

scientific article

Regulation of chromosomal replication initiation by oriC-proximal DnaA-box clusters in Bacillus subtilis ⬇️

scientific article published on September 12, 2011

Replication fork progression is paused in two large chromosomal zones flanking the DNA replication origin in Escherichia coli

scientific article published on 28 June 2016

Sequence-specific error profile of Illumina sequencers

scientific article

Structural and genetic analyses reveal the protein SepF as a new membrane anchor for the Z ring

scientific article

The ResD response regulator, through functional interaction with NsrR and fur, plays three distinct roles in Bacillus subtilis transcriptional control

scientific article

The Role of α-CTD in the Genome-Wide Transcriptional Regulation of the Bacillus subtilis Cells

scientific article published on 8 July 2015

The functional analysis of YabA, which interacts with DnaA and regulates initiation of chromosome replication in Bacillus subtils

scientific article published in April 2008

Transcription factor GreA contributes to resolving promoter-proximal pausing of RNA polymerase in Bacillus subtilis cells

scientific article published on 22 April 2011

Transcriptional, functional and cytochemical analyses of the veg gene in Bacillus subtilis

scientific article published in April 2003

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