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List of works by Michael J Carr

A Neonatal Murine Model of Coxsackievirus A6 Infection for Evaluation of Antiviral and Vaccine Efficacy.

scientific article published on March 2017

A consensus on fungal polymerase chain reaction diagnosis?: a United Kingdom-Ireland evaluation of polymerase chain reaction methods for detection of systemic fungal infections

scientific article published on July 2006

A low density oligonucleotide microarray for the detection of viral and atypical bacterial respiratory pathogens.

scientific article

A multicentre molecular analysis of hepatitis B and blood-borne virus coinfections in Viet Nam

scientific article

A neonatal murine model of coxsackievirus A4 infection for evaluation of vaccines and antiviral drugs

scientific article published on 01 January 2019

Association of interferon lambda polymorphisms with elevated baseline viral loads in chronic hepatitis C virus genotype 6 infection

scientific article published on 11 October 2017

Baseline prevalence and emergence of protease inhibitor resistance mutations following treatment in chronic HCV genotype-1-infected individuals

scientific article published on 29 April 2015

Bat-borne polyomaviruses in Europe reveal an evolutionary history of intrahost divergence with horseshoe bats distributed across the African and Eurasian continents

scientific article published on 09 July 2020

Characterization of an inactivated whole-virus bivalent vaccine that induces balanced protective immunity against coxsackievirus A6 and A10 in mice

scientific article published on 11 October 2018

Co-Circulation of Multiple Serotypes of Bluetongue Virus in Zambia

scientific article published on 31 August 2020

Deaths associated with human adenovirus-14p1 infections, Europe, 2009-2010

scientific article

Development of a rapid and quantitative method for the analysis of viral entry and release using a NanoLuc luciferase complementation assay

scientific article published on 23 October 2017

Development of a real-time RT-PCR for the detection of swine-lineage influenza A (H1N1) virus infections

scientific article published on 10 June 2009

Direct identification of the herpes simplex virus UL27 gene through single particle manipulation and optical detection using a micromagnetic array

scientific article published on 23 January 2020

Discovery and genetic characterization of diverse smacoviruses in Zambian non-human primates

scientific article published on 08 April 2019

Discovery of African bat polyomaviruses and infrequent recombination in the large T antigen in the Polyomaviridae

scientific article published on 22 April 2017

Discovery of Mwinilunga alphavirus: A novel alphavirus in Culex mosquitoes in Zambia

scientific article published on 6 April 2018

Discovery of a novel antiviral agent targeting the nonstructural protein 4 (nsP4) of chikungunya virus

scientific article

Effects of Acetylshikonin on the Infection and Replication of Coxsackievirus A16 in Vitro and in Vivo

scientific article published on 07 May 2019

Enterovirus-Associated Hand-Foot and Mouth Disease and Neurological Complications in Japan and the Rest of the World

scientific article published on 20 October 2019

Epidemiological characteristics of hand, foot, and mouth disease in Shandong, China, 2009-2016.

scientific article

Epstein-barr virus gene expression, human leukocyte antigen alleles and chronic high viral loads in pediatric renal transplant patients

scientific article published in August 2011

Extensive genetic diversity of bat-borne polyomaviruses reveals inter-family host-switching events

scientific article published on 03 May 2019

Extensive genetic diversity of polyomaviruses in sympatric bat communities: host-switching versus co-evolution

scientific article published on 19 February 2020

First report of sudden death due to myocarditis caused by adenovirus serotype 3.

scientific article

First reported case of endocarditis caused by Candida dubliniensis

scientific article published on June 2005

First reported cases of human adenovirus serotype 14p1 infection, Ireland, October 2009 to July 2010.

scientific article published on 24 February 2011

Generation of recombinant rabies viruses encoding NanoLuc luciferase for antiviral activity assays.

scientific article published on 8 February 2016

Genetic variation in clinical varicella-zoster virus isolates collected in Ireland between 2002 and 2003.

scientific article published on May 2004

Genome Analysis of Coxsackievirus A4 Isolates From Hand, Foot, and Mouth Disease Cases in Shandong, China

article

Genomic characterization of human adenovirus type 4 strains isolated worldwide since 1953 identifies two separable phylogroups evolving at different rates from their most recent common ancestor

scientific article published on 08 September 2019

Global and local persistence of influenza A(H5N1) virus.

scientific article

HIV type 1 coreceptor tropism, CCR5 genotype, and integrase inhibitor resistance profiles in Vietnam: implications for the introduction of new antiretroviral regimens

scientific article published on 9 March 2012

Heparan sulfate proteoglycans serve as an attachment factor for rabies virus entry and infection

scientific article published on 26 February 2018

Hepatitis B virus subgenotyping: history, effects of recombination, misclassifications, and corrections.

scientific article published on 26 March 2013

Hepatitis B virus vaccine failure resulting in chronic hepatitis B infection.

scientific article published on 28 July 2011

Hepatitis C Virus Core Mutations Associated with False-Negative Serological Results for Genotype 3a Core Antigen

scientific article published on 20 May 2015

Hepatitis C virus in Vietnam: high prevalence of infection in dialysis and multi-transfused patients involving diverse and novel virus variants

scientific article

High genetic diversity and frequent genetic reassortment of avian influenza A(H9N2) viruses along the East Asian-Australian migratory flyway

scientific article

High morbidity and mortality associated with an outbreak of influenza A(H3N2) in a psycho-geriatric facility

scientific article published on 17 April 2012

High prevalence of hepatitis delta virus among persons who inject drugs, Vietnam

scientific article published in March 2015

Homozygosity for HLA group 2 alleles predicts treatment failure with interferon-α and ribavirin in chronic hepatitis C virus genotype 1 infection

scientific article published on 19 September 2014

Host ESCRT factors are recruited during Chikungunya virus infection and are required the intracellular viral replication cycle

scientific article published on 27 April 2020

Human metapneumovirus-associated respiratory tract infections in the Republic of Ireland during the influenza season of 2003-2004.

scientific article published on May 2005

Human polyomavirus reactivation: disease pathogenesis and treatment approaches

scientific article

Identification of a genomic subgroup of BK polyomavirus spread in European populations

scientific article published in November 2006

Identification of group A rotaviruses from Zambian fruit bats provides evidence for long-distance dispersal events in Africa

scientific article published on 21 May 2018

Identification of novel inter-genotypic recombinants of human hepatitis B viruses by large-scale phylogenetic analysis.

scientific article published on 27 February 2012

Identification of the same polyomavirus species in different African horseshoe bat species is indicative of short-range host-switching events

scientific article published on 6 October 2017

Increasing genetic diversity of Zika virus in the Latin American outbreak

scientific article

Interleukin-15 is associated with disease severity in viral bronchiolitis

scientific article published on 5 November 2015

Isolation of a simian immunodeficiency virus from a malbrouck (Chlorocebus cynosuros).

scientific article

Letter to the Editor: smoking and older age associated with mumps in an outbreak in a group of highly-vaccinated individuals attending a youth club party, The Netherlands, 2012.

scientific article published on 22 May 2014

Long noncoding RNAs: Novel regulators of virus-host interactions

scientific article published on 23 April 2019

Molecular epidemiological evaluation of the recent resurgence in mumps virus infections in Ireland

scientific article

Molecular epidemiology of circulating measles virus in Ireland 2002-2007.

scientific article published in January 2009

Molecular epidemiology of human metapneumovirus in Ireland

scientific article published in March 2008

Murine model of acute myocarditis and cerebral cortical neuron edema induced by coxsackievirus B4. ⬇️

scientific article

Naturally occurring HCV NS5A/B inhibitor resistance-associated mutations to direct-acting antivirals

scientific article

New patterns: process and change in human geography

book

Non-coding regions of the Ebola virus genome contain indispensable phylogenetic and evolutionary information

scientific article published on 8 May 2015

Novel sub-lineages, recombinants and reassortants of severe fever with thrombocytopenia syndrome virus

scientific article

Pediatric Infections by Human mastadenovirus C Types 2, 89, and a Recombinant Type Detected in Japan between 2011 and 2018

scientific article published on 06 December 2019

Prevalence of HIV Type 1 Antiretroviral Drug Resistance Mutations in Vietnam: A Multicenter Study

article

Protective Efficacies of Formaldehyde-Inactivated Whole-Virus Vaccine and Antivirals in a Murine Model of Coxsackievirus A10 Infection

scientific article published on 19 April 2017

Rapid detection of hand, foot and mouth disease enterovirus genotypes by multiplex PCR

scholarly article published August 2018

Rapid molecular detection of the H275Y oseltamivir resistance gene mutation in circulating influenza A (H1N1) viruses

scientific article

Rapid, highly sensitive detection of herpes simplex virus-1 using multiple antigenic peptide-coated superparamagnetic beads

scientific article published on December 2014

Reactivation of BK polyomavirus in patients with multiple sclerosis receiving natalizumab therapy

scientific article published in September 2009

Recombinant expression and immunological characterisation of proteins derived from human metapneumovirus

scientific article published on 15 September 2011

Self-collected buccal swabs and rapid, real-time PCR during a large measles outbreak in Wales: Evidence for the protective effect of prior MMR immunisation

scientific article published on 17 March 2015

Seroepidemiological and phylogenetic characterization of neurotropic enteroviruses in Ireland, 2005-2014.

scientific article published on 10 January 2017

Seroepidemiology and phylogenetic characterisation of measles virus in Ireland, 2004-2013.

scientific article published on 29 May 2014

Seroepidemiology of the recent mumps virus outbreaks in Ireland

scientific article published on 24 January 2012

Serological evidence of Zika virus infection in non-human primates in Zambia

scientific article published on 01 June 2019

Single amino acid mutation in dengue virus NS4B protein has opposing effects on viral proliferation in mammalian and mosquito cells

scientific article published on 31 July 2018

Spontaneous clearance of hepatitis C infection after liver transplantation from IL28B rs12979860 CC donors

article published in 2012

Spread of measles virus D4-Hamburg, Europe, 2008-2011

scientific article

Subgenotype reclassification of genotype B hepatitis B virus.

scientific article

Subgenotyping of genotype C hepatitis B virus: correcting misclassifications and identifying a novel subgenotype.

scientific article

Tamdy Virus in Ixodid Ticks Infesting Bactrian Camels, Xinjiang, China, 2018

scientific article published on 01 November 2019

The Asian Lineage of Zika Virus: Transmission and Evolution in Asia and the Americas

article

The Role of Hepatitis C Virus Core Antigen Testing in the Era of Direct Acting Antiviral Therapies: What We Can Learn from the Protease Inhibitors

scientific article

Unique BK virus non-coding control region (NCCR) variants in hematopoietic stem cell transplant recipients with and without hemorrhagic cystitis

scientific article

Upregulated expression of the antioxidant sestrin 2 identified by transcriptomic analysis of Japanese encephalitis virus-infected SH-SY5Y neuroblastoma cells

scientific article published on 10 July 2019

Use of a geographic information system to map cases of measles in real-time during an outbreak in Dublin, Ireland, 2011.

scientific article

Valosin-containing protein (VCP/p97) plays a role in the replication of West Nile virus

scientific article

Viral Bronchiolitis is Associated With Altered Cytokine Gene Expression and Lymphocyte Activation Status

scientific article published on 18 July 2016

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