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List of works by Dick Roelofs

A functional isopenicillin N synthase in an animal genome

scientific article

Adaptive differences in gene expression associated with heavy metal tolerance in the soil arthropod Orchesella cincta.

scientific article published on 29 June 2009

Additive genetic variation of transcriptional regulation: metallothionein expression in the soil insect Orchesella cincta.

scientific article published in January 2006

An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide

scientific article published in Scientific Reports

Antimicrobial activity and carbohydrate metabolism in the bacterial metagenome of the soil-living invertebrate Folsomia candida

scientific article published on 13 May 2019

Antimicrobial activity in culturable gut microbial communities of springtails.

scientific article published on 3 May 2018

Apterygota in the spotlights of ecology, evolution and genomics

Biochemical pathways supporting beta-lactam biosynthesis in the springtail Folsomia candida.

scientific article published on 28 October 2016

Biofumigation using a wild Brassica oleracea accession with high glucosinolate content affects beneficial soil invertebrates

Collembase: a repository for springtail genomics and soil quality assessment

scientific article

Collembolan Transcriptomes Highlight Molecular Evolution of Hexapods and Provide Clues on the Adaptation to Terrestrial Life

scientific article

Combined Transcriptomics Analysis for Classification of Adverse Effects As a Potential End Point in Effect Based Screening

scientific article published on 2 November 2015

Comment on "Ecotoxicogenomics: bridging the gap between genes and populations".

scientific article published on 2 November 2010

Comparative population analysis of metallothionein promoter alleles suggests stress-induced microevolution in the field.

scientific article published in May 2008

Coping with living in the soil: the genome of the parthenogenetic springtail Folsomia candida

scientific article published on 28 June 2017

Cre recombinase expression can result in phenotypic aberrations in plants

scientific article published in January 2003

De novo transcriptome assembly and SNP discovery in the wing polymorphic salt marsh beetle Pogonus chalceus (Coleoptera, Carabidae).

scientific article

Development and application of the adverse outcome pathway framework for understanding and predicting chronic toxicity: I. Challenges and research needs in ecotoxicology.

scientific article

Development and application of the adverse outcome pathway framework for understanding and predicting chronic toxicity: II. A focus on growth impairment in fish

scientific article published on 30 October 2014

Differential gene expression profiles associated with heavy metal tolerance in the soil insect Orchesella cincta

scientific article published on 20 December 2006

Draft Genome Sequence of Bacillus toyonensis VU-DES13, Isolated from Folsomia candida (Collembola: Entomobryidae)

scientific article published on 11 May 2017

Ecological and molecular consequences of prolonged drought and subsequent rehydration in Folsomia candida (Collembola).

scientific article published on 3 November 2011

Ecotoxicogenomic assessment of diclofenac toxicity in soil

scientific article published on 16 February 2015

Effects of a natural toxin on life history and gene expression of Eisenia andrei

scientific article published on 2 January 2014

Enchytraeus albidus microarray: enrichment, design, annotation and database (EnchyBASE).

scientific article

Enchytraeus crypticus as model species in soil ecotoxicology.

scientific article published on 24 February 2012

Epigenetic effects of (nano)materials in environmental species - Cu case study in Enchytraeus crypticus

scientific article published on 08 January 2020

Evidence for multiple origins of Wolbachia infection in springtails

article

Evolutionary ecology of beta-lactam gene clusters in animals

scientific article

Evolutionary history of a dispersal-associated locus across sympatric and allopatric divergent populations of a wing-polymorphic beetle across Atlantic Europe

scientific article published on 7 January 2015

Exploring DNA methylation patterns in copper exposed Folsomia candida and Enchytraeus crypticus

scholarly article by Jeroen W. Noordhoek et al published January 2018 in Pedobiologia

Exposure to mercury reduces heat tolerance and heat hardening ability of the springtail Folsomia candida

scientific article published on 5 April 2009

Expression of mtc in Folsomia candida indicative of metal pollution in soil

scientific article published on 5 February 2011

Fate and effects of two pesticide formulations in the invertebrate Folsomia candida using a natural agricultural soil

scientific article published on 15 April 2019

Field-selected cadmium tolerance in the springtail Orchesella cincta is correlated with increased metallothionein mRNA expression

scientific article

From laboratory to the field: Validating molecular markers of effect in Folsomia candida exposed to a fungicide-based formulation

scientific article published on 11 April 2019

Functional environmental genomics of a municipal landfill soil.

scientific article published on 16 May 2012

Gene Family Evolution Reflects Adaptation to Soil Environmental Stressors in the Genome of the Collembolan Orchesella cincta

scientific article published on 11 June 2016

Gene expression analysis of collembola in cadmium containing soil

scientific article

Gene expression analysis reveals a gene set discriminatory to different metals in soil

scientific article published on 4 February 2010

Gene expression microarray analysis of heat stress in the soil invertebrate Folsomia candida.

scientific article

Genetic structure of soil invertebrate populations: Collembolans, earthworms and isopods

scientific article published in 2013

Genetic variation in parthenogenetic collembolans is associated with differences in fitness and cadmium-induced transcriptome responses

scientific article

Genome expansion of an obligate parthenogenesis-associated Wolbachia poses an exception to the symbiont reduction model

scientific article published on 06 February 2019

Genomics technology for assessing soil pollution

scientific article

High throughput nano-liter RT-qPCR to classify soil contamination using a soil arthropod

scientific article (publication date: March 2011)

Increase in egg resistance to desiccation in springtails correlates with blastodermal cuticle formation: Eco-evolutionary implications for insect terrestrialization

scientific article published on 10 July 2020

Influence of adaptive evolution of cadmium tolerance on neutral and functional genetic variation in Orchesella cincta.

scientific article

Integrating transcriptomics into triad-based soil-quality assessment

scientific article published on 26 February 2014

Localized chiasmata and meiotic nodules in the tetraploid onion Allium porrum

scientific article published on 01 August 1996

Mechanisms of phenanthrene toxicity in the soil invertebrate, Enchytraeus crypticus.

scientific article

Metagenomic analysis of bacterial community structure and diversity of lignocellulolytic bacteria in Vietnamese native goat rumen

scientific article

Metagenomic insights into lignocellulose-degrading genes through Illumina-based de novo sequencing of the microbiome in Vietnamese native goats' rumen

scientific article published on 12 March 2018

Metallothionein mRNA Expression and Cadmium Tolerance in Metal-stressed and Reference Populations of the Springtail Orchesella cincta

scientific article published on 28 September 2005

Micro-evolution of toxicant tolerance: from single genes to the genome's tangled bank.

scientific article

Microarray detection and qPCR screening of potential biomarkers of Folsomia candida (Collembola: Isotomidae) exposed to Bt proteins (Cry1Ab and Cry1Ac).

scientific article published on 17 September 2013

Molecular and life-history effects of a natural toxin on herbivorous and non-target soil arthropods

scientific article published on 5 February 2012

Multi-faceted analysis provides little evidence for recurrent whole-genome duplications during hexapod evolution

scientific article published on 27 May 2020

Narcotic mechanisms of acute toxicity of chlorinated anilines in Folsomia candida (Collembola) revealed by gene expression analysis.

scientific article published on 9 April 2011

No effect of selected engineered nanomaterials on reproduction and survival of the springtail Folsomia candida

Phenotypic and transcriptional responses associated with multi-generation exposure of Folsomia candida to engineered nanomaterials

article

Population-specific transcriptional differences associated with freeze tolerance in a terrestrial worm.

scientific article published on 11 March 2018

Primary structure of a cadmium-induced metallothionein from the insect Orchesella cincta (Collembola).

scientific article published in January 1999

Recombinational micro-evolution of functionally different metallothionein promoter alleles from Orchesella cincta

scientific article

Reference genes for QRT-PCR tested under various stress conditions in Folsomia candida and Orchesella cincta (Insecta, Collembola).

scientific article

Revealing pancrustacean relationships: phylogenetic analysis of ribosomal protein genes places Collembola (springtails) in a monophyletic Hexapoda and reinforces the discrepancy between mitochondrial and nuclear DNA markers

scientific article

Species-specific transcriptomic responses in Daphnia magna exposed to a bio-plastic production intermediate

scientific article published on 14 May 2019

Sugar sweet springtails: on the transcriptional response of Folsomia candida (Collembola) to desiccation stress

scientific article published on 29 September 2009

Temporal expression profile of an accessory-gland protein that is transferred via the seminal fluid of the simultaneous hermaphrodite Lymnaea stagnalis

scientific article published on 26 March 2019

The ecotoxicogenomic assessment of soil toxicity associated with the production chain of 2,5-furandicarboxylic acid (FDCA), a candidate bio-based green chemical building block

The effect of soil pH and temperature on Folsomia candida transcriptional regulation

scientific article

The influence of long-term copper contaminated agricultural soil at different pH levels on microbial communities and springtail transcriptional regulation

scientific article published on 16 September 2011

The microbiome of Folsomia candida: an assessment of bacterial diversity in a Wolbachia-containing animal

scientific article published on 22 October 2015

The use of gene expression to unravel the single and mixture toxicity of abamectin and difenoconazole on survival and reproduction of the springtail Folsomia candida

scholarly article by Livia Pitombeira de Figueirêdo et al published January 2019 in Environmental Pollution

Time-related survival effects of two gluconasturtiin hydrolysis products on the terrestrial isopod Porcellio scaber

scientific article

Transcriptional and posttranscriptional gene silencing are mechanistically related

scientific article published in March 2001

Transcriptional changes associated with lack of lipid synthesis in parasitoids

scientific article (publication date: 2012)

Transcriptional plasticity of a soil arthropod across different ecological conditions

scientific article published on 22 January 2011

Transcriptional profiling of the soil invertebrate Folsomia candida in pentachlorophenol-contaminated soil

scientific article published on 13 April 2015

Transcriptional responses indicate attenuated oxidative stress in the springtail Folsomia candida exposed to mixtures of cadmium and phenanthrene

scientific article published on 13 March 2013

Transcriptome assembly and microarray construction for Enchytraeus crypticus, a model oligochaete to assess stress response mechanisms derived from soil conditions

scientific article

Transcriptomics reveals extensive inducible biotransformation in the soil-dwelling invertebrate Folsomia candida exposed to phenanthrene

scientific article

Transgenerational and multigenerational stress gene responses to the insecticide etofenprox in Folsomia candida (Collembola)

scientific article published on 19 March 2019

Using time-lapse omics correlations to integrate toxicological pathways of a formulated fungicide in a soil invertebrate

scientific article published on 26 December 2018

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