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List of works by Kai Papenfort

A Vibrio cholerae autoinducer-receptor pair that controls biofilm formation

scientific article published on 20 March 2017

A conserved RNA seed-pairing domain directs small RNA-mediated stress resistance in enterobacteria

scientific article published on 15 August 2019

A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD

scientific article

A conserved small RNA promotes discoordinate expression of the glmUS operon mRNA to activate GlmS synthesis

scientific article

A dual-function RNA balances carbon uptake and central metabolism in Vibrio cholerae

scientific article published on 06 October 2021

A qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics.

scientific article

A small RNA activates CFA synthase by isoform-specific mRNA stabilization

scientific article published on 18 October 2013

Acid stress activation of the sigma(E) stress response in Salmonella enterica serovar Typhimurium.

scientific article

An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs

scientific article

Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation

scientific article

Comparative genomics boosts target prediction for bacterial small RNAs

scientific article

Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq

scientific article

Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation

scientific article

Evidence for an autonomous 5' target recognition domain in an Hfq-associated small RNA

scientific article

Functional determinants of the quorum-sensing non-coding RNAs and their roles in target regulation

scientific article published on 09 July 2013

Gene autoregulation by 3' UTR-derived bacterial small RNAs

scientific article published on 03 August 2020

Gifsy-1 Prophage IsrK with Dual Function as Small and Messenger RNA Modulates Vital Bacterial Machineries

scientific article

Hfq and Hfq-dependent small RNAs are major contributors to multicellular development in Salmonella enterica serovar Typhimurium

scientific article published on 16 February 2012

Interplay of regulatory RNAs and mobile genetic elements in enteric pathogens

scientific article published on 27 May 2016

In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways

scientific article

Microbes at their best: first Mol Micro Meeting Würzburg.

scientific article published on 20 October 2011

Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level

scientific article published on 12 April 2009

Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA.

scientific article published on 27 July 2011

Quorum sensing signal-response systems in Gram-negative bacteria

scientific article published on August 2016

RNA-mediated control of cell shape modulates antibiotic resistance in Vibrio cholerae

scientific article published on 27 November 2020

Regulation outside the box: new mechanisms for small RNAs

scientific article published on 04 May 2020

Regulatory RNA in bacterial pathogens

scientific article

SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay

scientific article

Small RNA functions in carbon metabolism and virulence of enteric pathogens

scientific article

Small RNA-based feedforward loop with AND-gate logic regulates extrachromosomal DNA transfer in Salmonella

scientific article

Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis

scientific article

Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon

scientific article (publication date: 2 August 2011)

Small non-coding RNAs and the bacterial outer membrane

scientific article

Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA

scientific article

Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA.

scientific article published on 28 March 2012

Sweet Business: Spot42 RNA Networks with CRP to Modulate Catabolite Repression

Switching fatty acid metabolism by an RNA-controlled feed forward loop

scientific article published on 19 March 2020

Symbiosis, virulence and natural-product biosynthesis in entomopathogenic bacteria are regulated by a small RNA

scientific article published on 02 November 2020

Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis

scientific article

Target activation by regulatory RNAs in bacteria

scientific article

Targeted decay of a regulatory small RNA by an adaptor protein for RNase E and counteraction by an anti-adaptor RNA

scientific article

The VrrA sRNA controls a stationary phase survival factor Vrp of Vibrio cholerae

scientific article

The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair

scientific article published in March 2012

The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium.

scientific article

Three autoinducer molecules act in concert to control virulence gene expression in Vibrio cholerae

article

Vibrio cholerae filamentation promotes chitin surface attachment at the expense of competition in biofilms

scientific article published on 25 June 2019

mRNA dynamics and alternative conformations adopted under low and high arginine concentrations control polyamine biosynthesis in Salmonella

scientific article published on 11 February 2019

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