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List of works by Matthias Buck

1H, 15N and 13C Resonance assignments and secondary structure determination reveal that the minimal Rac1 GTPase binding domain of plexin-B1 has a ubiquitin fold

scientific article published on April 2005

1H, 15N, 13C assignments for the activated form of the small Rho-GTPase Rac1.

scientific article published on 21 July 2006

A direct coupling between global and internal motions in a single domain protein? MD investigation of extreme scenarios

scientific article

A partially folded state of hen egg white lysozyme in trifluoroethanol: structural characterization and implications for protein folding

scientific article published on 19 January 1993

A refined solution structure of hen lysozyme determined using residual dipolar coupling data

scientific article

Acceleration of the folding of hen lysozyme by trifluoroethanol

scientific article published in January 1997

Acceptable protein and solvent behavior in primary hydration shell simulations of hen lysozyme

scientific article

Analysis of 15N-1H NMR relaxation in proteins by a combined experimental and molecular dynamics simulation approach: picosecond-nanosecond dynamics of the Rho GTPase binding domain of plexin-B1 in the dimeric state indicates allosteric pathways

scientific article published on 28 December 2012

Backbone Dynamics of the Ribonuclease Binase Active Site Area Using Multinuclear (15N and13CO) NMR Relaxation and Computational Molecular Dynamics†

article

Backbone assignment and secondary structure of Rnd1, an unusual Rho family small GTPase

scientific article published on 22 May 2012

Binding and function of phosphotyrosines of the Ephrin A2 (EphA2) receptor using synthetic sterile α motif (SAM) domains

scientific article

Binding of Rac1, Rnd1, and RhoD to a Novel Rho GTPase Interaction Motif Destabilizes Dimerization of the Plexin-B1 Effector Domain

scientific article

Combining NMR and molecular dynamics studies for insights into the allostery of small GTPase-protein interactions

scientific article published on January 2012

Compensatory and long-range changes in picosecond-nanosecond main-chain dynamics upon complex formation: 15N relaxation analysis of the free and bound states of the ubiquitin-like domain of human plexin-B1 and the small GTPase Rac1.

scientific article published on 04 February 2008

Conformational Properties of Four Peptides Spanning the Sequence of Hen Lysozyme

scientific article published in September 1995

Crystallography

scientific article published on 01 July 2003

Dissociation of a Dynamic Protein Complex Studied by All-Atom Molecular Simulations

scientific article published on February 2016

EPHA2 is associated with age-related cortical cataract in mice and humans

scientific article

Equilibrium unfolding studies of horse muscle acylphosphatase.

scientific article published in November 1994

G protein beta2 subunit-derived peptides for inhibition and induction of G protein pathways. Examination of voltage-gated Ca2+ and G protein inwardly rectifying K+ channels

scientific article

Global disruption of the WASP autoinhibited structure on Cdc42 binding. Ligand displacement as a novel method for monitoring amide hydrogen exchange

scientific article published in November 2001

Hydrogen Bond Energetics: A Simulation and Statistical Analysis ofN-Methyl Acetamide (NMA), Water, and Human Lysozyme†

article

Hydrogen exchange in native and denatured states of hen egg-white lysozyme

scientific article published in October 1992

Importance of the CMAP correction to the CHARMM22 protein force field: dynamics of hen lysozyme

scientific article published on 16 December 2005

Insights into Oncogenic Mutations of Plexin-B1 Based on the Solution Structure of the Rho GTPase Binding Domain

scientific article

Integrated computational approach to the analysis of NMR relaxation in proteins: application to ps-ns main chain 15N-1H and global dynamics of the Rho GTPase binding domain of plexin-B1.

scientific article published on 10 December 2010

Internal and Overall Peptide Group Motion in Proteins: Molecular Dynamics Simulations for Lysozyme Compared with Results from X-ray and NMR Spectroscopy

article

K-Ras at Anionic Membranes: Orientation, Orientation…Orientation. Recent Simulations and Experiments

scientific article published on March 2016

Ligand recognition by A-class Eph receptors: crystal structures of the EphA2 ligand-binding domain and the EphA2/ephrin-A1 complex

scientific article

Local Ordering at the N-H Sites of the Rho GTPase Binding Domain of Plexin-B1: Impact of Dimerization

scientific article published on 16 September 2019

Modeling transmembrane domain dimers/trimers of plexin receptors: implications for mechanisms of signal transmission across the membrane

scientific article

Molecular profiling of the "plexinome" in melanoma and pancreatic cancer

scientific article published on August 2009

Molecular simulations of a dynamic protein complex: role of salt-bridges and polar interactions in configurational transitions

scientific article

NMR structure of a heterodimeric SAM:SAM complex: characterization and manipulation of EphA2 binding reveal new cellular functions of SHIP2.

scientific article

Plexin structures are coming: opportunities for multilevel investigations of semaphorin guidance receptors, their cell signaling mechanisms, and functions ⬇️

scientific article published on June 29, 2012

Plexin-Bs enhance their GAP activity with a novel activation switch loop generating a cooperative enzyme

scientific article published on 29 June 2020

Prediction, refinement, and persistency of transmembrane helix dimers in lipid bilayers using implicit and explicit solvent/lipid representations: microsecond molecular dynamics simulations of ErbB1/B2 and EphA1.

scientific article published on 5 November 2012

Refinement of the primary hydration shell model for molecular dynamics simulations of large proteins

scientific article published on December 2009

STRUCTURAL BIOLOGY: Flipping a Switch

scientific article

Structural Determinants of Protein Dynamics: Analysis of 15N NMR Relaxation Measurements for Main-Chain and Side-Chain Nuclei of Hen Egg White Lysozyme

article

Structural and dynamical properties of a denatured protein. Heteronuclear 3D NMR experiments and theoretical simulations of lysozyme in 8 M urea

scientific article published in July 1997

Structural basis of Rnd1 binding to plexin Rho GTPase binding domains (RBDs)

scientific article

Structure and dynamics analysis on plexin-B1 Rho GTPase binding domain as a monomer and dimer

scientific article published on 25 June 2014

Structure and function of the intracellular region of the plexin-b1 transmembrane receptor

scientific article

The RNA-binding site of poliovirus 3C protein doubles as a phosphoinositide-binding domain

scientific article published on 05 August 2017

The cytoplasmic domain of neuropilin-1 regulates focal adhesion turnover

scientific article

Thermodynamic characterization of two homologous protein complexes: associations of the semaphorin receptor plexin-B1 RhoGTPase binding domain with Rnd1 and active Rac1.

scientific article published on May 2009

Time-resolved live-cell spectroscopy reveals EphA2 multimeric assembly

scientific article published on 16 November 2023

Toward a Description of the Conformations of Denatured States of Proteins. Comparison of a Random Coil Model with NMR Measurements

article

Trifluoroethanol and colleagues: cosolvents come of age. Recent studies with peptides and proteins.

scientific article

Tripping a switch: PDZRhoGEF rgRGS-bound Galpha13.

scientific article published on October 2008

When monomers are preferred: a strategy for the identification and disruption of weakly oligomerized proteins

scientific article

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