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List of works by Molly Megraw

A comparative study of ripening among berries of the grape cluster reveals an altered transcriptional programme and enhanced ripening rate in delayed berries

scientific article published on 18 August 2014

A guide through present computational approaches for the identification of mammalian microRNA targets

scientific article published on 01 November 2006

A stele-enriched gene regulatory network in the Arabidopsis root

scientific article

Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress.

scientific article published on 30 March 2015

DNase I SIM: A Simplified In-Nucleus Method for DNase I Hypersensitive Site Sequencing

scientific article

Editing of Epstein-Barr virus-encoded BART6 microRNAs controls their dicer targeting and consequently affects viral latency

scientific article

Environmental Stresses Modulate Abundance and Timing of Alternatively Spliced Circadian Transcripts in Arabidopsis

scientific article published on 3 November 2014

Environmental stresses modulate abundance and timing of alternatively spliced circadian transcripts in Arabidopsis

scientific article published on 8 January 2015

Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors.

scientific article published on 27 October 2016

Frequency and fate of microRNA editing in human brain

scientific article

Genomic and epigenetic alterations deregulate microRNA expression in human epithelial ovarian cancer

scholarly article

Identification of transcription factors from NF-Y, NAC, and SPL families responding to osmotic stress in multiple tomato varieties

scientific article published on 27 June 2018

Improved DNase-seq protocol facilitates high resolution mapping of DNase I hypersensitive sites in roots in Arabidopsis thaliana

scientific article published on 4 September 2015

IndeCut evaluates performance of network motif discovery algorithms.

scientific article published on 11 December 2017

Metabolomics analysis reveals both plant variety and choice of hormone treatment modulate vinca alkaloid production in Catharanthus roseus

scientific article published on 28 September 2020

MicroRNA Promoter Analysis

scientific article published on 01 January 2010

MicroRNA promoter element discovery in Arabidopsis

scientific article published on 3 August 2006

NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites

scientific article

NanoCAGE-XL: An Approach to High-Confidence Transcription Start Site Sequencing

scientific article published on 01 January 2018

Paired-end analysis of transcription start sites in Arabidopsis reveals plant-specific promoter signatures

scientific article

PlantSimLab - a modeling and simulation web tool for plant biologists

scientific article published on 21 October 2019

Quality control and evaluation of plant epigenomics data

scientific article published on 20 January 2022

Small Genetic Circuits and MicroRNAs: Big Players in Polymerase II Transcriptional Control in Plants.

scientific article published on 11 February 2016

Sustained-input switches for transcription factors and microRNAs are central building blocks of eukaryotic gene circuits

scientific article

The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology.

scientific article published in December 2017

The cyclophilin A DIAGEOTROPICA gene affects auxin transport in both root and shoot to control lateral root formation

scientific article published on 23 January 2015

The protein expression landscape of the Arabidopsis root.

scientific article

miRGen 2.0: a database of microRNA genomic information and regulation

scientific article

miRGen: a database for the study of animal microRNA genomic organization and function

scientific article

microRNAs exhibit high frequency genomic alterations in human cancer

scientific article

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