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List of works by Bridget Carragher

2.8 Å resolution reconstruction of the Thermoplasma acidophilum 20S proteasome using cryo-electron microscopy

scientific article

A combined quantitative mass spectrometry and electron microscopy analysis of ribosomal 30S subunit assembly in E. coli

scientific article

A helical processing pipeline for EM structure determination of membrane proteins

scientific article published on 20 September 2011

A new method for vitrifying samples for cryoEM.

scientific article

A new model for binding of kinesin 13 to curved microtubule protofilaments

scientific article published on 30 March 2009

A relational database for cryoEM: experience at one year and 50 000 images

scientific article published in March 2002

A structural change in the kinesin motor protein that drives motility

scientific article (publication date: 16 December 1999)

A test-bed for optimizing high-resolution single particle reconstructions

scientific article

A toolbox for ab initio 3-D reconstructions in single-particle electron microscopy.

scientific article

ACE: automated CTF estimation

scientific article published on 23 March 2005

Addressing preferred specimen orientation in single-particle cryo-EM through tilting.

scientific article published on 3 July 2017

Advances in computational image processing for microscopy.

scientific article published on January 1996

Allosteric Regulation of DNA Cleavage and Sequence-Specificity through Run-On Oligomerization

scientific article

An improved holey carbon film for cryo-electron microscopy

scientific article

Analytical methods and software tools for macromolecular microscopy

scientific article published in October 2003

Appion: an integrated, database-driven pipeline to facilitate EM image processing

scientific article (publication date: April 2009)

Architecture and design of the nuclear pore complex ⬇️

scientific article (publication date: 26 June 1992)

Automated cryoEM data acquisition and analysis of 284742 particles of GroEL.

scientific article

Automated data collection in single particle electron microscopy

scientific article

Automated image acquisition for single-particle reconstruction using p97 as the biological sample.

scientific article published on February 2001

Automated three-dimensional reconstruction of keyhole limpet hemocyanin type 1.

scientific article

Automatic particle detection through efficient Hough transforms

scientific article published on September 2003

Automatic particle selection: results of a comparative study

scientific article published on January 2004

Automation in single-particle electron microscopy connecting the pieces.

scientific article

Automation of random conical tilt and orthogonal tilt data collection using feature-based correlation

scientific article

Bacteriophage lambda stabilization by auxiliary protein gpD: timing, location, and mechanism of attachment determined by cryo-EM.

scientific article published on September 2008

Beam-induced motion of vitrified specimen on holey carbon film

scientific article published on 16 February 2012

Benchmarking cryo-EM Single Particle Analysis Workflow.

scientific article

Best Practices for Managing Large CryoEM Facilities

scientific article

Block Liposome and Nanotube Formation is a General Phenomenon of Two-Component Membranes Containing Multivalent Lipids

scientific article

Block liposomes from curvature-stabilizing lipids: connected nanotubes, -rods, or -spheres.

scientific article published on March 2009

Block liposomes vesicles of charged lipids with distinctly shaped nanoscale sphere-, pear-, tube-, or rod-segments

scientific article

CTF Challenge: Result summary.

scientific article published on 23 April 2015

Capsomer dynamics and stabilization in the T = 12 marine bacteriophage SIO-2 and its procapsid studied by CryoEM

scientific article published in March 2012

Characterization of circulating endothelial cells in acute myocardial infarction

scientific article published on March 2012

Characterization of virus-like particles in GARDASIL® by cryo transmission electron microscopy

scientific article

Complete functional mapping of infection- and vaccine-elicited antibodies against the fusion peptide of HIV

article

Conformational states of the full-length glucagon receptor

scientific article

Corrigendum: Structure of the Sec13/31 COPII coat cage

scientific article published in Nature

Cryo-EM Structure of a Fully Glycosylated Soluble Cleaved HIV-1 Envelope Trimer

scientific article

Cryo-EM for Small Molecules Discovery, Design, Understanding, and Application

scientific article published on 09 August 2018

Cryo-EM structure of arabinosyltransferase EmbB from Mycobacterium smegmatis

scientific article published on 07 July 2020

Cryomesh: a new substrate for cryo-electron microscopy

scientific article

Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser

scientific article

Current outcomes when optimizing 'standard' sample preparation for single-particle cryo-EM

scientific article published on 07 October 2019

DNA bending-induced phase transition of encapsidated genome in phage λ.

scientific article published on 28 February 2013

DOLORS: versatile strategy for internal labeling and domain localization in electron microscopy

scientific article published on December 2012

Data management challenges in three-dimensional EM.

scientific article

Disassembly and reassembly of human papillomavirus virus-like particles produces more virion-like antibody reactivity

scientific article

Distinct conformational spectrum of homologous multidrug ABC transporters

scientific article

Distinct conformations of the kinesin Unc104 neck regulate a monomer to dimer motor transition

scientific article

DoG Picker and TiltPicker: software tools to facilitate particle selection in single particle electron microscopy

scientific article published on May 2009

Does contamination buildup limit throughput for automated cryoEM?

scientific article

Engineered mutations change the structure and stability of a virus-like particle

scientific article

Engineered nanostructured β-sheet peptides protect membrane proteins

scientific article published on 30 June 2013

Ensemble cryoEM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme

scientific article published on 29 March 2018

Fully automated, sequential tilt-series acquisition with Leginon

scientific article

Genomic and functional analysis of Vibrio phage SIO-2 reveals novel insights into ecology and evolution of marine siphoviruses

scientific article published on 9 January 2012

Helical crystallization on lipid nanotubes: streptavidin as a model protein.

scientific article

Helical processing using PHOELIX.

scientific article published in January 1996

Initial evaluation of a direct detection device detector for single particle cryo-electron microscopy.

scientific article

Leginon: a system for fully automated acquisition of 1000 electron micrographs a day.

scientific article published on July 1999

Leginon: an automated system for acquisition of images from vitreous ice specimens.

scientific article published on October 2000

Liquid crystalline phases of dendritic lipid-DNA self-assemblies: lamellar, hexagonal, and DNA bundles

scientific article

Maskiton: Interactive, web-based classification of single-particle electron microscopy images

scientific article

Maturation in action: CryoEM study of a viral capsid caught during expansion

scientific article (publication date: 8 August 2012)

Maximizing the potential of electron cryomicroscopy data collected using direct detectors.

scientific article

Molecular architecture of mammalian nitric oxide synthases

scientific article

Movies of ice-embedded particles enhance resolution in electron cryo-microscopy

scientific article

Multiplexed TEM Specimen Preparation and Analysis of Plasmonic Nanoparticles

scientific article

Nanoscale assembly in biological systems: from neuronal cytoskeletal proteins to curvature stabilizing lipids

scientific article published on 20 April 2011

Near-atomic resolution reconstructions using a mid-range electron microscope operated at 200 kV.

scientific article

Nucleotide dependent packing differences in helical crystals of the ABC transporter MsbA

scientific article published on 10 December 2008

Nucleotide-dependent conformational changes in the N-Ethylmaleimide Sensitive Factor (NSF) and their potential role in SNARE complex disassembly.

scientific article

Optimizing "self-wicking" nanowire grids

scientific article published on 6 January 2018

Optimod--an automated approach for constructing and optimizing initial models for single-particle electron microscopy

scientific article published on 24 October 2013

Organization of the influenza virus replication machinery

scientific article

Outcome of the first electron microscopy validation task force meeting

scientific article (publication date: 8 February 2012)

PHOELIX: a package for semi-automated helical reconstruction

scientific article published on 01 June 1995

Polyvalent display of heme on hepatitis B virus capsid protein through coordination to hexahistidine tags

scientific article published on May 2008

Quaternary contact in the initial interaction of CD4 with the HIV-1 envelope trimer

scientific article published on 20 February 2017

Rapid routine structure determination of macromolecular assemblies using electron microscopy: current progress and further challenges

scientific article

Real-space reconstructions of nonideal helical particles

scientific article published in 1987

Reducing effects of particle adsorption to the air-water interface in cryo-EM

scientific article published on 24 September 2018

Robotic grid loading system for a transmission electron microscope

scientific article

Routine single particle CryoEM sample and grid characterization by tomography.

scientific article

Serial section electron tomography: a method for three-dimensional reconstruction of large structures

scientific article published in June 1994

Single-particle EM reveals extensive conformational variability of the Ltn1 E3 ligase.

scientific article published on 14 January 2013

Software tools for macromolecular microscopy

scientific article published on 07 November 2006

Software tools for molecular microscopy

scientific article (publication date: September 2008)

Software tools for molecular microscopy: an open-text Wikibook.

scientific article published in January 2010

Spotiton: a prototype for an integrated inkjet dispense and vitrification system for cryo-TEM.

scientific article

Structural analysis of polymers of sickle cell hemoglobin

Structural basis for cargo regulation of COPII coat assembly

scientific article

Structural basis for translational surveillance by the large ribosomal subunit-associated protein quality control complex

scientific article

Structural invariance of constitutively active and inactive mutants of acanthamoeba myosin IC bound to F-actin in the rigor and ADP-bound states.

scientific article

Structure of the Sec13/31 COPII coat cage

scientific article

Structure of the human Dicer-TRBP complex by electron microscopy

scientific article

Structure of the insulin receptor-insulin complex by single-particle cryo-EM analysis

scientific article published on 28 February 2018

The P22 tail machine at subnanometer resolution reveals the architecture of an infection conduit.

scientific article published on June 2009

The Structure of an Infectious P22 Virion Shows the Signal for Headful DNA Packaging

scientific article

The effect of salt and pH on block liposomes studied by cryogenic transmission electron microscopy

scientific article published on 23 June 2009

The molecular architecture of human Dicer

scientific article published on 18 March 2012

The structure of dual-variable-domain immunoglobulin molecules alone and bound to antigen

scientific article

Time-resolved cryo-EM using Spotiton

scientific article published on 10 August 2020

Toolbox for non-intrusive structural and functional analysis of recombinant VLP based vaccines: a case study with hepatitis B vaccine

scientific article (publication date: 2012)

Towards automated screening of two-dimensional crystals

scientific article

Transmission electron microscopy as an orthogonal method to characterize protein aggregates

scientific article

Unnatural amino acid incorporation into virus-like particles

scientific article published on 05 March 2008

Visualizing ribosome biogenesis: parallel assembly pathways for the 30S subunit

scientific article

Windex: a toolset for indexing helices

scientific article

emScope: A Tool Kit for Control and Automation of a Remote Electron Microscope

scientific article published on 01 December 1997

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