Search filters

List of works by Shintaro Katayama

A promoter-level mammalian expression atlas

scientific article

Aberrant splicing of genes involved in haemoglobin synthesis and impaired terminal erythroid maturation in SF3B1 mutated refractory anaemia with ring sideroblasts

scientific article published on 10 August 2015

Acute doses of caffeine shift nervous system cell expression profiles toward promotion of neuronal projection growth

scientific article published on 13 September 2017

Alternate transcription of the Toll-like receptor signaling cascade

scientific article published on 17 February 2006

An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man

An atlas of combinatorial transcriptional regulation in mouse and man

scientific article

Androgen-responsive long noncoding RNA CTBP1-AS promotes prostate cancer ⬇️

scientific article published on May 3, 2013

CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis

scientific article

CAGE-TSSchip: promoter-based expression profiling using the 5'-leading label of capped transcripts.

scientific article

Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

scientific article

Characterization and target genes of nine human PRD-like homeobox domain genes expressed exclusively in early embryos

scientific article published on 14 July 2016

Combined immunodeficiency and hypoglycemia associated with mutations in hypoxia upregulated 1.

scientific article published on 29 November 2016

Comprehensive mapping of the effects of azacitidine on DNA methylation, repressive/permissive histone marks and gene expression in primary cells from patients with MDS and MDS-related disease

scientific article

Construction of representative transcript and protein sets of human, mouse, and rat as a platform for their transcriptome and proteome analysis

article

Corrigendum: Genome-wide analysis of mammalian promoter architecture and evolution

scholarly article published in Nature Genetics

Damaging heterozygous mutations in NFKB1 lead to diverse immunologic phenotypes

scientific article published on 20 January 2017

Delineating the Healthy Human Skin UV Response and Early Induction of Interferon Pathway in Cutaneous Lupus Erythematosus

scientific article published on 08 April 2019

Differences in gene expression between mouse and human for dynamically regulated genes in early embryo

scientific article

Differentiation of ciliated human midbrain-derived LUHMES neurons

scientific article published on 28 October 2020

Dynamic usage of transcription start sites within core promoters

scientific article published on January 2006

Estrogen receptor β, a regulator of androgen receptor signaling in the mouse ventral prostate

scientific article

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

scientific article

Gene expression analysis of skin grafts and cultured keratinocytes using synthetic RNA normalization reveals insights into differentiation and growth control

scientific article published on 25 June 2015

Gene-Expression Profiling Suggests Impaired Signaling via the Interferon Pathway in Cstb-/- Microglia

scientific article

Genome-wide analysis of mammalian promoter architecture and evolution

scientific article (publication date: June 2006)

Genome-wide review of transcriptional complexity in mouse protein kinases and phosphatases.

scientific article

Globin mRNA reduction for whole-blood transcriptome sequencing

scientific article published on 12 August 2016

Guide for library design and bias correction for large-scale transcriptome studies using highly multiplexed RNAseq methods

scientific article published on 13 August 2019

Hidden layers of human small RNAs

scientific article

Human Wound-Healing Research: Issues and Perspectives for Studies Using Wide-Scale Analytic Platforms

scientific article published on March 2014

Human pluripotent reprogramming with CRISPR activators.

scientific article published on 6 July 2018

Identification of region-specific transcription factor genes in the adult mouse brain by medium-scale real-time RT-PCR.

scientific article

Integration of cap analysis of gene expression and chromatin immunoprecipitation analysis on array reveals genome-wide androgen receptor signaling in prostate cancer cells

scientific article

Intracellular signalling pathways and cytoskeletal functions converge on the psoriasis candidate gene CCHCR1 expressed at P-bodies and centrosomes.

scientific article published on 4 June 2018

Ketogenic diet attenuates hepatopathy in mouse model of respiratory chain complex III deficiency caused by a Bcs1l mutation

scientific article published on 19 April 2017

MANF protects human pancreatic beta cells against stress-induced cell death

scientific article published on 21 July 2018

Mlh1 deficiency in normal mouse colon mucosa associates with chromosomally unstable colon cancer.

scientific article published in May 2018

NET-CAGE characterizes the dynamics and topology of human transcribed cis-regulatory elements

scientific article published on 02 September 2019

NOD-like receptor signaling and inflammasome-related pathways are highlighted in psoriatic epidermis

scientific article published on 15 March 2016

Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development

scientific article

Optimizing bone morphogenic protein 4-mediated human embryonic stem cell differentiation into trophoblast-like cells using fibroblast growth factor 2 and transforming growth factor-β/activin/nodal signalling inhibition

scientific article published on 12 June 2017

Protein-protein interactions of the hyperthermophilic archaeon Pyrococcus horikoshii OT3.

scientific article

SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization

scientific article published on 31 August 2013

Single-cell transcriptome analysis of endometrial tissue.

scientific article published on 13 February 2016

The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation

scientific article published on 19 April 2009

The complexity of the mammalian transcriptome

scientific article published on 20 July 2006

The human PRD-like homeobox gene LEUTX has a central role in embryo genome activation

scientific article published on 30 August 2016

The pruritus- and TH2-associated cytokine IL-31 promotes growth of sensory nerves

scientific article published on 6 April 2016

The transcriptional landscape of the mammalian genome

scientific article

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

scientific article

Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

scientific article published in April 2006

Transcriptional network dynamics in macrophage activation

scientific article published on 12 May 2006

Unamplified cap analysis of gene expression on a single-molecule sequencer.

scientific article

[Inferring the genetic network using informatics]

scientific article published on 01 December 2004

miR-148a is an androgen-responsive microRNA that promotes LNCaP prostate cell growth by repressing its target CAND1 expression ⬇️

scientific article published on September 7, 2010

Paulina is supported by:

About Paulina

Help